LOCUS NC_009038 7995 bp DNA circular BCT 27-FEB-2007 DEFINITION Shewanella baltica OS155 plasmid pSbal04, complete sequence. ACCESSION NC_009038 VERSION NC_009038.1 GI:126090338 PROJECT GenomeProject:13386 KEYWORDS . SOURCE Shewanella baltica OS155 ORGANISM Shewanella baltica OS155 Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella. REFERENCE 1 (bases 1 to 7995) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D.R., Brettin,T., Bruce,D., Han,C., Tapia,R., Brainard,J., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Brettar,I., Klappenbach,J., Konstantinidis,K., Rodrigues,J., Tiedje,J. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of plasmid pSbal04 of Shewanella baltica OS155 JOURNAL Unpublished REFERENCE 2 (bases 1 to 7995) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (23-FEB-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 7995) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D.R., Brettin,T., Bruce,D., Han,C., Tapia,R., Brainard,J., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Brettar,I., Klappenbach,J., Konstantinidis,K., Rodrigues,J., Tiedje,J. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (12-FEB-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000567. URL -- http://www.jgi.doe.gov JGI Project ID: 3634605 Source DNA and bacteria available from James Tiedje (tiedjej@msu.edu) Contacts: James Tiedje (tiedjej@msu.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..7995 /organism="Shewanella baltica OS155" /mol_type="genomic DNA" /strain="OS155" /db_xref="taxon:325240" /plasmid="pSbal04" gene complement(222..440) /locus_tag="Sbal_4475" /db_xref="GeneID:4841355" CDS complement(222..440) /locus_tag="Sbal_4475" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001041775.1" /db_xref="GI:126090339" /db_xref="GeneID:4841355" /translation="MAFTVRVTEAQEKQLDELMALTGQATKAGFVLYMIENGKEIMKN DSKFRRVKALEEEIKLKEKEIAKIKTGK" gene complement(1132..1314) /locus_tag="Sbal_4476" /db_xref="GeneID:4841357" CDS complement(1132..1314) /locus_tag="Sbal_4476" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001041776.1" /db_xref="GI:126090340" /db_xref="GeneID:4841357" /translation="MPTKHINEATWRLVEKETVKAVVETREPVKDTDVLNWLIMRGLR DIEKEDYRELKKEEKK" gene 1439..3091 /locus_tag="Sbal_4477" /db_xref="GeneID:4841358" CDS 1439..3091 /locus_tag="Sbal_4477" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001041777.1" /db_xref="GI:126090341" /db_xref="GeneID:4841358" /translation="MYDFNGLRIYFKDEHLHTTFTNERVFSYVDIEECARRGLKIVPR DMTWHLDGSCDVHDLYHPWESLPSSFTGIAFKLYQASGFREQPCIELKASPAKITQGH NVFGSESLELGVRSVFQALVSALPNFAHMLDFDTAEFFRIDSTFSIKLPNSDCLASAL DSLSRVSNRYLRPSRDGDYETTIYFNKVRGEAGRNTGRSSSLCIYSKLDEVLHQLDEL REKAKKEKTSRYDSVISALESESLQYFATNRLRFESRICARFFERHQLPTRVIDLLEF VRGYESENGKGSFCRFLWQTAMKDLLDAISGQVITVVHDSKVKKLLHSLYDTIDKNGK LRTAKTVRLFGFYRRLCTEGYAKVKRTMGTTGKSSFYNAVNDLLAAGFSKAQLQNLDK KETLPLVHLLEFDFNAQRPADYVEPVMPLAALDYREFLAVMSGSAAMQDEALTLDRRL AISLEGFGLPASYVEGLKAGRSIRLTGERSLSLALWEDGEFDLVESVAENELQCIRDK LEFRRLSRDSALSVEDAQSEMAYLGFNPASRYSYKSNVQGVK" gene 3091..3441 /locus_tag="Sbal_4478" /db_xref="GeneID:4841352" CDS 3091..3441 /locus_tag="Sbal_4478" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001041778.1" /db_xref="GI:126090342" /db_xref="GeneID:4841352" /translation="MIELEINFAQYGVIEDNGQVWANAQMVTDFVFDLNKAGCMFGTI PILTDNNNAVAKRLVEELKRAGGPIKIIAEQGNKSVKGRISSIIKDFKLVDDFSKSSP VSSPASRMIEKPNA" gene 3708..3926 /locus_tag="Sbal_4479" /db_xref="GeneID:4841356" CDS 3708..3926 /locus_tag="Sbal_4479" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001041779.1" /db_xref="GI:126090343" /db_xref="GeneID:4841356" /translation="MKLFKAARKYGSKVAVAGSALVAAGAQAADQSAIINAAQADATA NQGLVIGAVLAVAVMGFGAYALLKWLGR" gene 4062..5909 /locus_tag="Sbal_4480" /db_xref="GeneID:4841353" CDS 4062..5909 /locus_tag="Sbal_4480" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001041780.1" /db_xref="GI:126090344" /db_xref="GeneID:4841353" /translation="MRFLYLIFLFLFSLNVNSASITHITYDYNLHGGPPIGTEFVSCA QLASMFKGSDGYKPTGSCSFSATRNSASIGFLDKRPGNFFSIEVSFNLGTTCAMFGTP RSMFCGLECNSQGTCSEIAISKCTGNSYLQSFTYKDAANWTFVCGEYDPVNPPDGGDA GSGSGVENNFSFKGDKGNKGDKGDRGEKGEQGEQGEKGEKGEKGEIGETGENGVDGVN GLDGLNGKDGLNGSTGATGATGATGATGATGATGLQGERGLQGERGQIGLTGERGLTG ERGEIGLTGLQGLAGLDGQDGVDGVGCEVFRQGEASVLRCGAGSQLTSIDVLDSRYLD VINLQETQIKQMKNSGCTVAAVNESTGDISFACLGDTVLPPVNLKGKQGEQGVAGING LDGKDGNDGKDGIDGINGVDGVDGVDGLAGINGIDGKDGIDGIDGINGIDGKDGKDGK DGAQGIQGIQGLQGIAGIAGLDGKDGENVDTAAVVNAIKEASDRLNDNLDSKIDLSPV NVSSEGSFDQVFGENSLGVLKTELIERTEELNSLFKDKKAELIASFSINDVNANFADS GFVLHVQGMNIPVPSFLKTWSPYFPDLRNLVYLVALLAAFAIYFGGTRK" gene 6337..7704 /locus_tag="Sbal_4481" /db_xref="GeneID:4841354" CDS 6337..7704 /locus_tag="Sbal_4481" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001041781.1" /db_xref="GI:126090345" /db_xref="GeneID:4841354" /translation="MASSIYHGKPGSYKTSTAVWFHILPALRKGRFVCTNVEGLFSLE EIEKILGEKFPETAYLFRVSTLNDIGVNTMAKWFHWLPLGAFIVIDEIQNLYNSKDRT DFKVHDTNRSVNTLDRILDFPSLPENVKYLSQQALISVIDDGYTDDMGISERDSNGHV LYPVNIKDALMRHRKYNWDIIGCTPEIAHVHTLYRGVSEKAVSHRSFDFVPIPWFQRR PRTHEHNPMEKGIRPVKGETVKRPKIPVKVFSLYKSTQTGKNNRSGVNENPFKNRATL FKIFIPLSIVLGFLSLPLFYGSDPKGADSKQVGSTSPAANGLVSKAHNTIAGQGVPVS SGDTHNPIFNDAPDFLAQLKVEQLFIVGHVQKSKFLGIVKTQNGAESRQTITDYFVFS ASSKDAQYTFNSEDLKEMGYTIKKITNCYVQINNVVRTVHSFCNPSLPASEPDSKNES ILAGI" ORIGIN 1 tgggcgagct tgcgagaatc gctctagctg gtttttgccc gtaacataat gtgcgttgtg 61 cgaagtaatt gcggtatgtc atttttgacg gtaaaaatga cataccaccg cgctatcaat 121 aatcaatcct ggcacgtgta ttttgatgtc aaaaagtgca accggtgatt gttttttgct 181 atcactttct attcctggga cacgtttatt gctatcagaa atcacttacc ggttttgatt 241 tttgctatct ctttctcttt gagctttatc tcttcttcca gtgctttaac ccgcctaaac 301 ttgctgtcgt tcttcatgat ctctttaccg ttctcaatca tgtacagcac gaaccccgct 361 ttagtcgctt ggcctgtaag tgccatgagt tcgtctagct gcttctcttg tgcttctgtc 421 actctaactg taaatgccat ttcttatact ccgaaagttt ctgataacca tttaacaatg 481 gctttctttg cgcccttaga atcgggctct ttatctaatt taacgtcaat ccatagctta 541 cagttgtagc tgcggcctgt taccgagact tctctcgaga accgttccca gtaaaactcg 601 attccttcat attcaaccca aacacaccaa gctccgtttt ctttgtaatt cagttctgac 661 tgtttcatat atccgccttt gctatcaatt aacgttatct cgatgtgtta atgatagcaa 721 aactggagat taaagcaagc aaatgatagc aaaaacatcg atgtttttgc tattttgcta 781 tcaataaatg gttgcaccat tttattgatg ttcgggtata ttatttaggg attattaaac 841 cgtaggtttg atgggagcgt agcgtgacgc ttgaaagcgg ggcgcttttc cccgtagtcc 901 ttcgtcctgc tagaccgctt ttactctttt aacttacttc cagcgcgttt actgcttaac 961 ggtcggagac aaacccgatt ttcaggtttt ggtgagttag ataagccaca cactctaata 1021 gtggcttatc gtccaaactg tggaatagtt taaacacagc atatagtggg catatgaatg 1081 ctaaggcgct ttaaaacact acatgttgtg cctttgctga tttaaatacc cttacttctt 1141 ttcttctttt tttaactccc tatagtcctc cttctcaatg tctctcagtc ctcgcattat 1201 tagccagttt aagacgtctg tatcttttac gggttcgcgt gtttccacaa ctgcttttac 1261 cgtctctttt tctacaagtc gccatgtggc ttcgtttatg tgcttggttg gcatgattgc 1321 tcctttgttt ctaactaaat cataaactaa tttctgagaa agcttgcgaa ttagattctt 1381 agtaattaga atcaccctag aaactaattt cttagaaagt tagaaacagg ggttttgatt 1441 gtacgacttc aacggattgc ggatttactt caaagatgaa cacttacaca cgacattcac 1501 aaatgagcgt gttttttcct atgttgacat cgaagaatgc gctcgccgtg gtcttaaaat 1561 cgttcctcgt gatatgactt ggcacttgga cggctcgtgt gatgtgcacg atctttatca 1621 tccgtgggag tctttaccgt ctagcttcac tggtatagcg ttcaagctgt atcaagcaag 1681 tggttttcgc gaacagccat gcatcgagtt aaaagcatca ccagccaaaa tcactcaagg 1741 gcataacgtt ttcggttctg agtcgttaga gctcggtgtt cgcagtgttt tccaagccct 1801 cgttagtgcc ttgcccaatt tcgctcacat gcttgatttt gataccgctg aatttttccg 1861 tattgattcc acgtttagca tcaaattacc caattctgat tgtctggcct ctgcgcttga 1921 ttctctttct cgtgtttcta atcgttacct gcgtcctagt cgcgatggtg actatgagac 1981 aacgatctat ttcaacaagg tacgtggtga agcagggcgc aacactggcc gttctagttc 2041 gctgtgtatc tactccaagc ttgacgaggt tttacaccaa cttgatgagc ttagagaaaa 2101 agctaagaag gaaaaaacca gtcgttatga ctcggtgatt tctgcgttgg agtccgaatc 2161 gttgcagtat ttcgcaacta atcgcctccg ctttgagtcg cgcatttgcg cacgtttctt 2221 tgagcgtcac cagttgccaa ctcgggttat cgatctactt gagtttgttc gtggttacga 2281 gtcagagaac gggaagggct cattttgtcg atttttgtgg caaacggcca tgaaggattt 2341 gcttgatgct attagcggtc aagtgatcac tgttgttcat gattctaagg ttaaaaaact 2401 gctccattcg ttgtacgaca cgatagataa aaacggcaag ttgagaacgg ctaaaaccgt 2461 ccgcttgttt ggtttctacc gtcgcttatg taccgaaggc tatgcaaagg tgaaacgcac 2521 tatgggaaca actggcaaat catcgtttta caacgctgta aacgatttat tggcggctgg 2581 cttttctaag gctcagcttc aaaatttgga taagaaggaa acgcttcctt tagttcacct 2641 ccttgaattt gattttaatg ctcagcgtcc tgctgattat gttgaacccg taatgccttt 2701 ggccgcactc gattatcgcg agtttttagc tgttatgtct ggttctgctg caatgcaaga 2761 tgaagctctg acactcgata gacgtttggc tatttctctc gagggcttcg gcttaccagc 2821 ttcttatgtt gaaggtctga aagcgggtag atctattcgt ttaactggcg aacgctcgtt 2881 atcacttgct ctttgggagg atggtgaatt cgatctcgtt gagtcggtag ctgaaaatga 2941 acttcagtgt attagggata agttggagtt taggcgcttg tcgcgtgact ctgctttgag 3001 tgttgaagat gctcaatctg aaatggctta tttggggttt aatcccgcta gtcgttattc 3061 gtataaatca aatgttcaag gggtgaagtg atgattgaat tagaaattaa ttttgcacaa 3121 tacggtgtta ttgaagataa cggtcaagtt tgggccaatg ctcaaatggt tactgacttt 3181 gtttttgact tgaataaagc gggttgtatg ttcggtacta ttcccatttt aactgacaac 3241 aataatgctg ttgcaaaacg tttagttgaa gagttaaagc gtgcaggcgg gccaattaaa 3301 attattgctg aacaaggtaa taagtcagtt aaaggtagaa tatcttctat tattaaagat 3361 tttaaattgg ttgatgattt ttctaagtct tctcctgtta gttctcctgc ttcacgaatg 3421 attgaaaaac caaatgccta aatgtattca gatcacaggc gacacaataa tagatacagg 3481 tcaatcaatt gctgattgca ctgaatttgt tgtgatgact ggttctgatt acaggcttta 3541 tacaaacgat tctttttata cgttgttgca aagtttattt atgtttgatt tggagatttg 3601 cacacaggtt gtaagtgctg gtctcttaat gttcctcgta agtcattacg caggtaattt 3661 agtccgctgg ctcggtaagt agccattcaa taaaataggg aaatgatatg aaactgttta 3721 aagctgctcg taaatatggt tctaaagttg ctgttgctgg ctctgcatta gttgctgctg 3781 gtgctcaagc tgccgaccaa tctgcaatta ttaacgctgc tcaagctgat gcaactgcaa 3841 accaaggctt agtaatcggt gcagtattgg ccgttgctgt tatgggcttt ggtgcttatg 3901 cgttgttaaa gtggttaggc cgttaatttg gtcacatcaa tattactagg aacaatattt 3961 ttatattgca ttgttactgg ttttaaaact ggcattattg caagttgata acgccaattt 4021 aaataaggga gcaattcgct cccttttttt atggtgacaa tatgagattc ttatatttaa 4081 tttttctctt tcttttttcg cttaatgtta attctgcctc aattactcat ataacttatg 4141 actataacct tcatggtggc ccacctattg gaaccgagtt cgtttcttgt gctcagcttg 4201 cttctatgtt taaaggttct gatggttata aacccactgg ttcctgtagc ttttcagcaa 4261 ctaggaacag tgcttcgata ggtttccttg ataaacgccc gggtaatttt ttttctattg 4321 aagtttcttt taatctaggt actacgtgcg caatgtttgg tactcctcgt tcaatgtttt 4381 gcggtttaga atgtaacagc caaggcactt gttctgaaat tgctatttca aagtgtactg 4441 gtaattctta tttgcaaagt ttcacttata aagatgctgc aaactggact tttgtttgtg 4501 gtgaatacga tcccgttaat cctcctgatg gtggtgatgc tggttctggt tctggtgttg 4561 aaaataattt ttcattcaaa ggtgacaagg gtaacaaagg tgataagggt gataggggtg 4621 aaaaaggaga gcaaggcgaa caaggcgaaa aaggtgaaaa gggtgaaaag ggtgaaatag 4681 gtgaaacagg tgaaaacggt gttgatggtg ttaatggcct tgatggttta aatggtaaag 4741 atggtctcaa tggttcaact ggagcaactg gagcaactgg agctactgga gctactggag 4801 ctactggagc aactggcctt cagggtgaac gtggtttaca gggtgagcgt ggtcaaatcg 4861 gtttaactgg cgaacggggt ttaacgggtg aacgtggtga aataggtctt actggcttac 4921 aaggtcttgc tggcctagat ggtcaggatg gtgttgatgg tgttggctgt gaggtatttc 4981 gtcaaggtga ggctagtgtt ttgcgttgtg gtgcaggttc tcagctcacc tctattgatg 5041 ttttagattc tcgttactta gatgttatca atttacaaga aactcaaatt aagcaaatga 5101 aaaactcggg ttgtaccgtt gccgctgtta acgagtcaac gggtgatatt tcctttgctt 5161 gtctcggtga cactgttcta cctcctgtaa atttaaaagg taagcagggc gaacaaggtg 5221 tcgctggtat caatggttta gatggtaagg atggcaatga tggcaaggat ggtattgacg 5281 gtattaacgg tgttgatggt gttgatggtg ttgatggctt ggctggcatt aacggcattg 5341 atggcaagga tgggatagat ggtattgatg gtatcaatgg cattgatggc aaagatggca 5401 aagatggcaa agatggtgct caaggtattc aaggtattca gggtttacaa ggcatagctg 5461 gcattgctgg cctcgatggt aaagatggtg agaatgttga tactgctgct gttgtaaacg 5521 ctattaaaga agcctctgac cgtttaaatg ataatttaga ctctaagatt gatttaagtc 5581 ctgtcaatgt ttcttcggaa ggttcttttg atcaagtttt tggtgaaaat tctttaggtg 5641 ttttaaaaac tgaattaatt gaaagaacag aagagttaaa ttctttattt aaagataaaa 5701 aagctgagtt aatagcttct ttttcaatta atgatgttaa tgctaatttt gctgactctg 5761 gttttgtttt acatgttcaa ggtatgaata ttcctgtccc ttcattcctt aaaacttggt 5821 cgccatactt tccagattta agaaacttag tttatttagt cgctctttta gctgcgtttg 5881 ctatttactt tggaggtaca aggaaatgat taagctaata tttatttcag tattgttttt 5941 agctttccca gtttttgccg tttctgatgg ctcaggttct ggctcttgga gttttggcgg 6001 tttttttagt gaagttgaag cattttttca aatgattcac catttcattt ttgaacaaat 6061 tcctctcatg tttcaaaggg cagtggaata tttttattat tacgcaattc ttattaaaat 6121 taagtctctt atatttttca tgaaagtgag ctttggtgtt gctgctctgt tcttgtctga 6181 cataggtctt gcttccgcta tgaactcggc tgttaacgct ttaccccaag acatgcaagc 6241 ccttgtttct cagctcggtt tgatacgtgc aataaacatt gttatcgagg cttatatagc 6301 tcgatacgtc ttacaatata tgctttaggg ggttatgtgg cttcttctat ttatcatggc 6361 aaacccggct cttataagac ctcaacggcg gtgtggtttc acatactgcc agctttgagg 6421 aaaggccgct ttgtttgtac aaatgtcgaa ggtctttttt ctctcgaaga aatagaaaag 6481 attttaggtg agaaattccc tgaaacagct tatttattta gggtttcaac gctcaatgat 6541 attggtgtta atacaatggc aaaatggttt cattggctac cattgggcgc ttttattgtt 6601 attgatgaaa ttcaaaattt atataattct aaagatagaa ctgattttaa agtccatgat 6661 acaaatcgct ctgttaatac tttagatagg attcttgact ttcctagctt gcctgagaac 6721 gtcaaatatt tatctcaaca agctttaatt tctgttattg atgatggtta taccgatgat 6781 atgggtattt ctgaacgtga ttctaatggt catgttcttt atccagttaa tattaaagat 6841 gcgcttatga gacatcgtaa atacaattgg gacattattg gttgtactcc tgaaattgct 6901 catgttcata ctctttatag gggtgtttct gaaaaagcgg tgtcacatcg cagttttgat 6961 tttgtgccta ttccttggtt tcagcgtcgc cctagaacgc atgaacataa cccaatggaa 7021 aaaggtattc gccctgttaa gggtgaaact gttaagcgtc ctaagattcc tgtaaaggtt 7081 ttctctttat ataaatcaac acaaactggt aaaaataatc ggagtggcgt taatgaaaac 7141 ccatttaaaa atcgtgctac gctttttaaa atctttattc ctttatccat tgttcttggt 7201 ttcctatctt tgccattatt ctatggttct gatccaaagg gtgccgattc taaacaggtt 7261 ggttcaacgt ctccagcggc taatggcctt gtttctaaag cgcataacac gattgctggg 7321 cagggtgttc ctgtttcttc tggtgatact cataatccga ttttcaatga tgcacctgat 7381 ttccttgctc agttgaaagt tgaacagctt tttattgttg gccatgttca aaaaagtaag 7441 ttcttaggca ttgttaagac gcagaacggc gcagagtctc gccaaacgat tactgattac 7501 tttgttttct cggcatcttc taaggatgct caatacactt ttaacagtga agatttaaaa 7561 gagatgggtt acacgattaa gaagatcaca aattgctatg ttcaaataaa caatgttgtt 7621 cgaaccgttc acagcttttg caatccatcg ttgccagctt ctgaacctga ttcaaagaac 7681 gaatcaattt tagctggtat ctagcctgca cgcgcgaagc cgaaggctga ggcgcgcgcg 7741 tgtgcaggct gatacattgc ttaattactt aaaggattat tatgcaaccc atttctatag 7801 ttgaattttt aatttattta ttgctcggaa tagttttagg catgcttgta actgattttt 7861 tttggcttga ggtacttaag catttagacg aaatcactgt ttgcccatag ctgcgcacaa 7921 tgtaccgaac gttatgttga gggtttgcgt ttggtactat gcgcagcatc aaacgacaaa 7981 aagcagtgcg gaggg //