LOCUS pCph8 4231 bp ds-DNA circular 21-JUN-2009 DEFINITION ACCESSION VERSION SOURCE ORGANISM COMMENT COMMENT ApEinfo:methylated:1 FEATURES Location/Qualifiers rep_origin complement(243..925) /label=ColE1 origin /ApEinfo_fwdcolor=gray50 /ApEinfo_revcolor=gray50 CDS complement(1052..1711) /label=CmR /ApEinfo_fwdcolor=#ffff5b /ApEinfo_revcolor=#ffff5b promoter 1919..1967 /label=PLTetO-1 /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=#00ffff RBS 1975..1988 /label=RBS pprotet /ApEinfo_fwdcolor=#939393 /ApEinfo_revcolor=#939393 misc_feature 1977..1988 /label=B0034 /ApEinfo_fwdcolor=#00ff00 /ApEinfo_revcolor=#00ff00 misc_feature 142..161 /label=G00101 binding site /ApEinfo_fwdcolor=#00ff00 /ApEinfo_revcolor=#00ff00 misc_feature 1919..1947 /label=R0040 /ApEinfo_fwdcolor=#ffff00 /ApEinfo_revcolor=#ffff00 CDS 1996..4230 /label=Cph8 (Cph1/EnvZ) /ApEinfo_fwdcolor=#ca3535 /ApEinfo_revcolor=#ca3535 ORIGIN 1 ctagaGGCAT CAAATAAAAC GAAAGGCTCA GTCGAAAGAC TGGGCCTTTC GTTTTATCTG 61 TTGTTTGTCG GTGAACGCTC TCCTGAGTAG GACAAATCCG CCGCCCTAGA CCTAGGCGTT 121 CGGCTGCGGC GAGCGGTATC AGCTCACTCA AAGGCGGTAA TACGGTTATC CACAGAATCA 181 GGGGATAACG CAGGAAAGAA CATGTGAGCA AAAGGCCAGC AAAAGGCCAG GAACCGTAAA 241 AAGGCCGCGT TGCTGGCGTT TTTCCATAGG CTCCGCCCCC CTGACGAGCA TCACAAAAAT 301 CGACGCTCAA GTCAGAGGTG GCGAAACCCG ACAGGACTAT AAAGATACCA GGCGTTTCCC 361 CCTGGAAGCT CCCTCGTGCG CTCTCCTGTT CCGACCCTGC CGCTTACCGG ATACCTGTCC 421 GCCTTTCTCC CTTCGGGAAG CGTGGCGCTT TCTCAATGCT CACGCTGTAG GTATCTCAGT 481 TCGGTGTAGG TCGTTCGCTC CAAGCTGGGC TGTGTGCACG AACCCCCCGT TCAGCCCGAC 541 CGCTGCGCCT TATCCGGTAA CTATCGTCTT GAGTCCAACC CGGTAAGACA CGACTTATCG 601 CCACTGGCAG CAGCCACTGG TAACAGGATT AGCAGAGCGA GGTATGTAGG CGGTGCTACA 661 GAGTTCTTGA AGTGGTGGCC TAACTACGGC TACACTAGAA GGACAGTATT TGGTATCTGC 721 GCTCTGCTGA AGCCAGTTAC CTTCGGAAAA AGAGTTGGTA GCTCTTGATC CGGCAAACAA 781 ACCACCGCTG GTAGCGGTGG TTTTTTTGTT TGCAAGCAGC AGATTACGCG CAGAAAAAAA 841 GGATCTCAAG AAGATCCTTT GATCTTTTCT ACGGGGTCTG ACGCTCAGTG GAACGAAAAC 901 TCACGTTAAG GGATTTTGGT CATGACTAGT GCTTGGATTC TCACCAATAA AAAACGCCCG 961 GCGGCAACCG AGCGTTCTGA ACAAATCCAG ATGGAGTTCT GAGGTCATTA CTGGATCTAT 1021 CAACAGGAGT CCAAGCGAGC TCGATATCAA ATTACGCCCC GCCCTGCCAC TCATCGCAGT 1081 ACTGTTGTAA TTCATTAAGC ATTCTGCCGA CATGGAAGCC ATCACAGACG GCATGATGAA 1141 CCTGAATCGC CAGCGGCATC AGCACCTTGT CGCCTTGCGT ATAATATTTG CCCATGGTGA 1201 AAACGGGGGC GAAGAAGTTG TCCATATTGG CCACGTTTAA ATCAAAACTG GTGAAACTCA 1261 CCCAGGGATT GGCTGAGACG AAAAACATAT TCTCAATAAA CCCTTTAGGG AAATAGGCCA 1321 GGTTTTCACC GTAACACGCC ACATCTTGCG AATATATGTG TAGAAACTGC CGGAAATCGT 1381 CGTGGTATTC ACTCCAGAGC GATGAAAACG TTTCAGTTTG CTCATGGAAA ACGGTGTAAC 1441 AAGGGTGAAC ACTATCCCAT ATCACCAGCT CACCGTCTTT CATTGCCATA CGAAATTCCG 1501 GATGAGCATT CATCAGGCGG GCAAGAATGT GAATAAAGGC CGGATAAAAC TTGTGCTTAT 1561 TTTTCTTTAC GGTCTTTAAA AAGGCCGTAA TATCCAGCTG AACGGTCTGG TTATAGGTAC 1621 ATTGAGCAAC TGACTGAAAT GCCTCAAAAT GTTCTTTACG ATGCCATTGG GATATATCAA 1681 CGGTGGTATA TCCAGTGATT TTTTTCTCCA TTTTAGCTTC CTTAGCTCCT GAAAATCTCG 1741 ATAACTCAAA AAATACGCCC GGTAGTGATC TTATTTCATT ATGGTGAAAG TTGGAACCTC 1801 TTACGTGCCG ATCAACGTCT CATTTTCGCC AGATATCGAC GTCTAAGAAA CCATTATTAT 1861 CATGACATTA ACCTATAAAA ATAGGCGTAT CACGAGGCCC TTTCGTCTTC ACCTCGAGTC 1921 CCTATCAGTG ATAGAGATAC TGAGCACATC AGCAGGACGC ACTGACCGAA TTCATTAAAG 1981 AGGAGAAAgg taccCATGGC CACCACCGTA CAACTCAGCG ACCAATCCCT CCGTCAGCTA 2041 GAAACCCTCG CCATCCACAC CGCCCACCTG ATTCAGCCCC ACGGTTTAGT GGTGGTCCTG 2101 CAGGAACCAG ACCTCACCAT CAGCCAAATT AGCGCCAACT GCACCGGCAT TTTAGGGCGA 2161 TCGCCAGAGG ATTTGTTGGG CAGAACCCTA GGGGAAGTGT TTGATAGCTT TCAGATTGAT 2221 CCCATCCAGA GTCGCCTAAC GGCCGGACAA ATCAGCAGCC TCAACCCCAG TAAACTTTGG 2281 GCGCGGGTCA TGGGGGACGA CTTTGTCATT TTTGACGGGG TTTTTCATCG CAACAGTGAC 2341 GGTTTATTGG TATGTGAACT CGAGCCAGCC TACACTTCCG ATAATCTGCC CTTCCTCGGT 2401 TTTTATCACA TGGCCAACGC TGCCCTGAAT CGGTTGCGCC AACAAGCTAA TCTACGGGAT 2461 TTCTACGATG TTATTGTCGA AGAAGTCCGC CGTATGACTG GCTTTGACCG GGTGATGCTA 2521 TACCGCTTTG ATGAAAATAA CCACGGTGAT GTCATTGCCG AAGATAAACG GGATGATATG 2581 GAACCCTATT TGGGCCTGCA CTATCCCGAA TCGGATATTC CCCAACCCGC CCGTCGGCTA 2641 TTTATCCACA ACCCCATTCG AGTAATTCCC GATGTTTATG GTGTGGCGGT GCCCCTGACC 2701 CCAGCGGTTA ACCCCAGCAC CAACCGAGCG GTGGATTTAA CAGAATCCAT TCTGCGCAGT 2761 GCGTACCATT GCCACTTGAC CTATCTGAAA AATATGGGGG TAGGAGCGTC TTTAACCATT 2821 TCCCTAATTA AGGACGGCCA TCTCTGGGGG CTCATTGCCT GCCACCATCA AACCCCCAAA 2881 GTAATTCCCT TTGAACTGCG TAAAGCCTGC GAATTTTTTG GTCGGGTGGT GTTTAGCAAC 2941 ATTTCCGCCC AGGAAGATAC GGAAACCTTC GATTACCGGG TGCAGCTGGC GGAGCATGAA 3001 GCGGTTTTAT TGGACAAAAT GACCACGGCG GCGGATTTTG TCGAAGGATT AACTAATCAT 3061 CCCGATCGCC TGTTGGGATT AACGGGCTCC CAGGGGGCGG CCATTTGCTT TGGGGAAAAA 3121 TTGATTTTAG TAGGGGAAAC CCCGGACGAG AAAGCAGTGC AATATTTACT GCAATGGTTG 3181 GAGAATCGGG AAGTGCAAGA CGTTTTCTTC ACCTCTTCCC TCTCACAAAT TTATCCTGAT 3241 GCAGTGAATT TTAAATCCGT GGCCAGTGGC TTATTGGCCA TTCCCATTGC CCGTCACAAC 3301 TTTTTGCTCT GGTTTCGCCC TGAAGTGTTG CAAACGGTTA ATTGGGGCGG TGACCCAAAT 3361 CATGCTTACG AAGCTACCCA GGAAGACGGT AAAATCGAGC TCCATCCCCG CCAATCCTTT 3421 GACCTCTGGA AAGAAATTGT CCGACTCCAA TCTTTGCCCT GGCAATCGGT GGAAATCCAA 3481 AGTGCCCTGG CCCTGAAAAA GGCGATCGTC AACCTCATTT TGCGCCAGGC AGAAGAATTG 3541 CATATGGCGG CTGGTGTTAA GCAACTGGCG GATGACCGCA CGCTGCTGAT GGCGGGGGTA 3601 AGTCACGACT TGCGCACGCC GCTGACGCGT ATTCGCCTGG CGACTGAGAT GATGAGCGAG 3661 CAGGATGGCT ATCTGGCAGA ATCGATCAAT AAAGATATCG AAGAGTGCAA CGCCATCATT 3721 GAGCAGTTTA TCGACTACCT GCGCACCGGG CAGGAGATGC CGATGGAAAT GGCGGATCTT 3781 AATGCAGTAC TCGGTGAGGT GATTGCTGCC GAAAGTGGCT ATGAGCGGGA AATTGAAACC 3841 GCGCTTTACC CCGGCAGCAT TGAAGTGAAA ATGCACCCGC TGTCGATCAA ACGCGCGGTG 3901 GCGAATATGG TGGTCAACGC CGCCCGTTAT GGCAATGGCT GGGTCAAAGT CAGCAGCGGA 3961 ACGGAGCCGA ATCGCGCCTG GTTCCAGGTG GAAGATGACG GTCCGGGAAT TGCGCCGGAA 4021 CAACGTAAGC ACCTGTTCCA GCCGTTTGTC CGCGGCGACA GTGCGCGCAC CATTAGCGGC 4081 ACGGGATTAG GGCTGGCAAT TGTGCAGCGT ATCGTGGATA ACCATAACGG GATGCTGGAG 4141 CTTGGCACCA GCGAGCGGGG CGGGCTTTCC ATTCGCGCCT GGCTGCCAGT GCCGGTAACG 4201 CGGGCGCAGG GCATGACAAA AGAAGGGTAA t //