Chan:Bioinformatics Sites: Difference between revisions
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<b>Arabidopsis thaliana:</b><br> | |||
[http://www.arabidopsis.org/ TAIR (The Arabidopsis Information Resource)]<br> | |||
[http://atensembl.arabidopsis.info/index.html AtEnsembl]<br> | |||
[http://www.arabidopsis.org/Blast/ TAIR BLAST search]<br> | |||
[http://tigrblast.tigr.org/er-blast/index.cgi?project=ath1 TIGR Arabidopsis BLAST Search]<br> | |||
[http://www.arabidopsis.org/servlets/sv TAIR Seqviewer]<br> | |||
[http://signal.salk.edu/cgi-bin/tdnaexpress Salk Institute Genome Analysis Laboratory (SIGnaL) T-DNA Express]<br> | |||
[http://www.weigelworld.org/resources WeigelWorld Resources incl. AtGenExpress]<br> | |||
[http://epigenomics.mcdb.ucla.edu/DNAmeth/ Jacobsen/Ecker Arabidopsis Methylome Database]<br> | |||
[http://asrp.cgrb.oregonstate.edu/ Carrington Lab siRNA Database]<br> | |||
[http://mpss.udel.edu/at/ MPSS Small RNAs and Transcripts]<br> | |||
---- | |||
<br> | |||
<b>Bioinformatics:</b><br> | |||
[http://www.ncbi.nlm.nih.gov/blast/ BLAST at NCBI]<br> | |||
[http://www.ncbi.nlm.nih.gov/BLAST/Genome/PlantBlast.shtml BLAST Plant Genomes]<br> | |||
[http://smart.embl-heidelberg.de/ SMART Protein Domains]<br> | |||
[http://www.ebi.ac.uk/clustalw/ ClustalW at EBI]<br> | |||
---- | |||
<br> | |||
<b>Experimental:</b><br> | |||
[http://frodo.wi.mit.edu/cgi-bin/primer3/primer3_www.cgi Primer3]<br> | |||
[http://www.basic.northwestern.edu/biotools/oligocalc.html Oligo Calculator]<br> | |||
[http://rebase.neb.com/rebase/rebase.html REBase at NEB]<br> | |||
[http://helix.wustl.edu/dcaps/dcaps.html dCAPs Finder]<br> | |||
---- | |||
<br> | |||
<b>Literature:</b><br> | |||
[http://www.ncbi.nlm.nih.gov/ NCBI]<br> | |||
[http://isi01.isiknowledge.com/portal.cgi ISI Web of Knowledge]<br> | |||
[http://scholar.google.com/ Google Scholar]<br> | |||
[http://www.openwetware.org/wiki/Chan Home]<br> | |||
Revision as of 02:42, 8 November 2007
Arabidopsis thaliana:
TAIR (The Arabidopsis Information Resource)
AtEnsembl
TAIR BLAST search
TIGR Arabidopsis BLAST Search
TAIR Seqviewer
Salk Institute Genome Analysis Laboratory (SIGnaL) T-DNA Express
WeigelWorld Resources incl. AtGenExpress
Jacobsen/Ecker Arabidopsis Methylome Database
Carrington Lab siRNA Database
MPSS Small RNAs and Transcripts
Bioinformatics:
BLAST at NCBI
BLAST Plant Genomes
SMART Protein Domains
ClustalW at EBI
Experimental:
Primer3
Oligo Calculator
REBase at NEB
dCAPs Finder
Literature:
NCBI
ISI Web of Knowledge
Google Scholar
