User:Pedrobeltrao/Notebook/Structural analysis of phosphorylation sites/Setup: Difference between revisions

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New page: {|{{table}} width="800" |- |style="background-color: #EEE"|128px<span style="font-size:22px;"> Structural analysis of phosphorylation sites</span> |- | cols...
 
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===Fetch data and code===
===Fetch data and code===


# checkout a fresh copy of the project folder
1. checkout a fresh copy of the project folder  
   <code>svn checkout http://phospho3d.googlecode.com/svn/trunk/ phospho3d</code>
   <code>svn checkout http://phospho3d.googlecode.com/svn/trunk/ phospho3d</code>
# Link the shared Dropbox folder with data into the project folder
2. Link the shared Dropbox folder with data into the project folder
   <code>ln -s ~/Dropbox/phospho3d phospho3d/dat</code>
   <code>ln -s ~/Dropbox/phospho3d phospho3d/dat</code>



Revision as of 16:57, 26 September 2009

Structural analysis of phosphorylation sites

How to set up your local copy of the project

As it seems, there is no easy one-stop solution for scientific data sharing and collaboration. So we have to rely on a mix of different programs and services.

Prerequisites

  1. Install subversion (svn)
  2. Install the Biskit library
  3. Install the Dropbox program
  4. Install the Zotero firefox plugin

Request membership

  1. send an e-mail to Pedro or Raik and ask for:
    • dropbox folder sharing
    • google code membership

Fetch data and code

1. checkout a fresh copy of the project folder

 svn checkout http://phospho3d.googlecode.com/svn/trunk/ phospho3d

2. Link the shared Dropbox folder with data into the project folder

 ln -s ~/Dropbox/phospho3d phospho3d/dat

Join Literature group

  1. http://www.zotero.org/groups/phospho3d