OpenWetWare:Presentations/NCI-ICBP: Difference between revisions
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=Solution: OpenWetWare= | =Solution: OpenWetWare= | ||
[ | [[Image:Openwetwarehomepage.png|800px]] | ||
</div> | </div> | ||
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=Labs on OpenWetWare= | =Labs on OpenWetWare= | ||
[ | [[Image:SilverLabhomepage.png|800px]] | ||
</div> | </div> | ||
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=Integrating OpenWetWare into research= | =Integrating OpenWetWare into research= | ||
[ | [[Image:SilverProtocolshomepage.png|800px]] | ||
</div> | </div> | ||
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=Dysfunctionality of Model Publishing= | =Dysfunctionality of Model Publishing= | ||
[[Image:Icbp-talk-pyramid.png]] | [[Image:Icbp-talk-pyramid.png]] | ||
'''figure: Ty | '''figure: Ty Thomson''' | ||
</div> | </div> | ||
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=Systematization and Data Standards= | =Systematization and Data Standards= | ||
<html><img src="http://www.fotosearch.com/thumb/ICL/ICL154/BIM_116.jpg"</img></html> | <html><img src="http://www.fotosearch.com/thumb/ICL/ICL154/BIM_116.jpg"</img></html> | ||
* Standards for models | |||
** MIRIAM - Minimum Information Requested in the Annotation of Biochemical Models | |||
** SBML - Systems Biology Markup Language | |||
* Communicating with computers, not people | * Communicating with computers, not people | ||
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=YeastPheromoneModel.org= | =YeastPheromoneModel.org= | ||
[[Image:Yeastpheromonemodel reaction page.png]] | [[Image:Yeastpheromonemodel reaction page.png]] | ||
</div> | </div> | ||
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To be integrated into OWW | To be integrated into OWW | ||
Part of a larger workflow:<br> | |||
[[Image:OverallWorkflow.png]] | |||
</div> | </div> | ||
Latest revision as of 14:09, 14 June 2007
<html>
<script>
function addStylesheet(url)
{
// presentation mode
if (document.createStyleSheet) {
document.createStyleSheet(url);
}
else {
var styles = "@import url('" + url + "');";
var newSS=document.createElement('link');
newSS.rel='stylesheet';
newSS.href='data:text/css,'+escape(styles);
document.getElementsByTagName("head")[0].appendChild(newSS);
}
} if (location.href.indexOf('action=render') > 0) {
document.write("<head><title>Presentation</title></head>"); // need this for some browsers for addStylesheet to work
addStylesheet('http://www.w3.org/Talks/Tools/Slidy/slidy.css');
addStylesheet("/skins/monobook/main.css");
addStylesheet("/index.php?title=MediaWiki:Common.css&usemsgcache=yes&action=raw&ctype=text/css&smaxage=18000");
addStylesheet("/index.php?title=MediaWiki:Monobook.css&usemsgcache=yes&action=raw&ctype=text/css&smaxage=18000");
addStylesheet("/index.php?title=-&action=raw&gen=css&maxage=18000&smaxage=0&ts=20070606210926");
document.write('<script src="http://www.w3.org/Talks/Tools/Slidy/slidy.js" type="text/javascript"><' + '/script>');
document.write('<script type="text/javascript">wgBreakFrames = false;<' + '/script>'); // for wikibits.js
document.write('<script src="/skins/common/wikibits.js" type="text/javascript"><' + '/script>');
document.write('<script src="/index.php?title=-&action=raw&smaxage=0&gen=js" type="text/javascript"><' + '/script>');
} else {
// wiki mode
if (wgServer)
document.write('<a href="' + wgServer + '/index.php?title=' + wgPageName + '&action=render">=> Start web presentation</a>');
} </script> </html>
|
OpenWetWareA wiki for capturing and sharing biological knowledge |
Solution: OpenWetWare
OpenWetWare's contributions
|
|
Labs on OpenWetWare
Integrating OpenWetWare into research
Dysfunctionality of Model Publishing
figure: Ty Thomson
YeastPheromoneModel.org
Ty Thomson, MIT
YeastPheromoneModel.org
80-20 Rule / Pareto Principle
Agile Informatics effort
Wiki-based model documentation
with Brian Joughin, MIT/ICBP
To be integrated into OWW
Part of a larger workflow:
