Talk:20.109(S07): Bio-material engineering/Sequence analysis

Tuesday/Thursday Lab Sequence Data

team color	candidate number	sequence	relative strength	comments/notes
Green	A	XXXXXYXXXXXXXXXSGGXXSGGGXSAXQGXXXXGXXXXXXXXRXXXXXAXPXXXXXXXTXAYFXXXLXIXXXXXXTXXXXXXXXXSXXVFXDNS STIEGXXPXXXPXXALXXXXXXXXXXXXXXXXXXAXXXDXXXGXXXXXXXGXXXXXXXXXXAXXXXXTKXXXXXXXXXXXXXXXXXXXXXXXXXXX	as strong as pAu1	too many unknown codons to analyze
Green	D	XXXXXYALQASGGGGSGGGGSGGGGSASQGGGGSGTRMRDAWXLMKGYLARPVAXXRIRTKAYF*RGLVIARDLITTXXM*XXXLXXXXVFXDN XSXXXXXXXXKTXXTXXXY*VXXXXNSLXXXXXGXXXXR*XXXRRXFXXW*GDLXXXXXQFLXXXXXXNXXXXXTXXXLXLX*XXMXXNSIXYXXX	as strong as pAu1	seems to be a longer sequence than other library sequences...a stop codon might have been mutated into a tyrosine
Purple	D	SGGGG SGGGG SGGGA SEIVL TQSPA LLSLS PGXRA TLSCR TSQSI SSTYL AWYQQ KPGQA PRLLI YGTSG RXTGI PYRFQ WXGSG XDFTX TISRL EPEDF AVXYC QQXAT SPRLL XGDQG GDQIR NSRTK AYF*R RLXXX XAASR SDTXC XC	weaker than pAU1	a few of the amino acids are conserved although the order is not. our sequence is longer than that of pAU1
Yellow	B	YALQA SGGGG SGGGG SGGGG SASQG GGXXX XXLXR XCXXL XXYXA RPVAX XRIRT KAYF*	weaker than pAu1	most of amino acids in variable region are uncertain
Yellow	D	YALQA SGGGG SGGGG SGGGG SASQG GGGXX LXLPT XCTXX GXXLA RXVAX XRIRT KAYF*	weaker than pAu1
Blue
Pink	A	YAXQA SGGGG SGGGG SGGGG SASQG GGGSG SRXXX SXLYH FLXLA XPVAX XRIRT KAYF* RGLVI XXDLI TXXXM*
Pink	C	YALQA SGGGG SGGGG SGGGG SASQG GGGSG GRWIR CWQXX PXXLA RPVAX XRIRT KAYF*
Red	D	YALQA SGGGG SGGGG SGGGG SASQG GGGSG ERXLA CXKKF EWYLX RPVAX XRIRT KAYF	not really a gold binder (less colonies than pCT-CON)	Colony C sequencing failed

Wednesday/Friday Lab Sequence Data

team color	candidate number	sequence	relative strength	comments/notes
Green
Purple
Yellow
Blue
Pink
Red

HAVE A GREAT SUMMER!!