20.109(F09): Fall 2009 schedule: Difference between revisions
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| [[User:Michelle R. Sukup Jackson| MSJ]] | | [[User:Michelle R. Sukup Jackson| MSJ]] | ||
| [[20.109(F09): Mod 1 Day 4 DNA ligations and bacterial transformations| DNA ligation and bacterial transformation]] | | [[20.109(F09): Mod 1 Day 4 DNA ligations and bacterial transformations| DNA ligation and bacterial transformation]] | ||
| | | [[Media:20.109(F09) M1D4lab.pptx| NK lab notes]], [[Media:F09_M1D4-ANS.pdf | ANS lab notes]], [[Media:BE109 Fall09 Mod1 Day4 Lecture to post.pdf | Lecture Handout]] | ||
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| [[User:Michelle R. Sukup Jackson| MSJ]] | | [[User:Michelle R. Sukup Jackson| MSJ]] | ||
| [[20.109(F09): Mod 1 Day 5 Examine candidate clones| Examine candidate clones]] | | [[20.109(F09): Mod 1 Day 5 Examine candidate clones| Examine candidate clones]] | ||
| Christine from EHS visits lab | | Christine from EHS visits lab<br> | ||
[[Media:20.109(F09) M1D5lab.pptx| NK lab notes]], [[Media:F09_M1D5-ANS.pdf | ANS lab notes]], [[Media:BE109 Fall09 Mod1 Day5 Lecture fin To Post.pdf | Lecture Handout]] | |||
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| [[User:Michelle R. Sukup Jackson| MSJ]] | | [[User:Michelle R. Sukup Jackson| MSJ]] | ||
| [[20.109(F09): Mod 1 Day 6 Restriction map and tissue culture | Restriction map and tissue culture]] | | [[20.109(F09): Mod 1 Day 6 Restriction map and tissue culture | Restriction map and tissue culture]] | ||
| Neal/Linda visit lab for peer review exercise | | Neal/Linda visit lab for peer review exercise<br> [[Media:20.109(F09) M1D6lab.pptx| NK lab notes]], [[Media:F09_M1D6-ANS.pdf | ANS lab notes]], [[Media:BE109 Fall09 Mod1 Day6 to POST.pdf | Lecture notes]], [[Media:Statistics for 109.pptx | Michelle's Stats for TR lab]] | ||
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| [[User:Michelle R. Sukup Jackson| MSJ]] | | [[User:Michelle R. Sukup Jackson| MSJ]] | ||
| [[20.109(F09): Mod 1 Day 7 Lipofection| Lipofection]] | | [[20.109(F09): Mod 1 Day 7 Lipofection| Lipofection]] | ||
| [[20.109(F09):DNA engineering "Progress Report"| Mod 1 "progress report"]] due by 11AM on the day you have lab | | [[20.109(F09):DNA engineering "Progress Report"| Mod 1 "progress report"]] due by 11AM on the day you have lab<br> | ||
[[Media:20.109(F09) M1D7lab.pdf| NK lab notes]], [[Media:F09_M1D7-ANS.pdf | ANS lab notes]], [[Media:BE109 Fall09 Mod1 Day7 to POST.pdf | Lecture notes]] | |||
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| [[User:Michelle R. Sukup Jackson| MSJ]] | | [[User:Michelle R. Sukup Jackson| MSJ]] | ||
| [[20.109(F09): Mod 1 Day 8 FACS analysis| FACS analysis]] | | [[20.109(F09): Mod 1 Day 8 FACS analysis| FACS analysis]] | ||
| | | [[Media:BE109 Fall09 Mod1 Day8 to POST.pdf | Lecture notes]] | ||
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| colspan="7" | | | colspan="7" | | ||
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| [[User:Tyler Dewitt| TD]] | | [[User:Tyler Dewitt| TD]] | ||
| [[20.109(F09): Mod 2 Day 1 Testing an engineered biological system| Testing an engineered biological system]] | | [[20.109(F09): Mod 2 Day 1 Testing an engineered biological system| Testing an engineered biological system]] | ||
| [[20.109(F09):DNA engineering "Memo"| Mod 1 "memo"]] is due by 11AM on the day you have lab | | [[20.109(F09):DNA engineering "Memo"| Mod 1 "memo"]] is due by 11AM on the day you have lab <br> [[Media:20.109(F09) lectureM2D1 handout.pdf| M2D1 lecture handout]]<br>[[Media:20.109(F09) M2D1 labpix.pptx| NK lab notes]], [[Media:F09_M2D1-ANS.pdf | ANS lab notes]] | ||
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| [[User:Tyler Dewitt| TD]] | | [[User:Tyler Dewitt| TD]] | ||
| [[20.109(F09): Mod 2 Day 2 Measuring system performance | Measuring System Performance]] | | [[20.109(F09): Mod 2 Day 2 Measuring system performance | Measuring System Performance]] | ||
| | | [[Media:20.109(F09) M2D2 Handout.pdf| M2D2 lecture handout]]<br>[[Media:20.109(F09) M2D2 labpix.pptx| NK lab notes]], [[Media:F09_M2D2-ANS.pdf | ANS lab notes]] | ||
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| [[User:Tyler Dewitt| TD]] | | [[User:Tyler Dewitt| TD]] | ||
| [[20.109(F09): Mod 2 Day 3 Tools for system engineering | Tools for System Engineering]] | | [[20.109(F09): Mod 2 Day 3 Tools for system engineering | Tools for System Engineering]] | ||
| | | [[Media:20.109(F09) M2D3 handout.pdf| M2D3 lecture handout]]<br> [[Media:20.109(F09) M2D3 labpix.pptx| NK lab notes]], [[Media:F09_M2D3-ANS.pdf | ANS lab notes]] | ||
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| [[User:Tyler Dewitt| TD]] | | [[User:Tyler Dewitt| TD]] | ||
| [[20.109(F09): Mod 2 Day 5 Assessing re-tuned system | Assessing re-tuned system]] | | [[20.109(F09): Mod 2 Day 5 Assessing re-tuned system | Assessing re-tuned system]] | ||
| | | [[Media:20.109(F09) M2D5 handout.pdf| M2D5 lecture handout]], [[Media:F09_M2D5-ANS.pdf | ANS lab notes]] | ||
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| [[User:Tyler Dewitt| TD]] | | [[User:Tyler Dewitt| TD]] | ||
| [[20.109(F09): Mod 2 Day 6 Readouts of DNA, Protein | Readouts: DNA, Protein]] | | [[20.109(F09): Mod 2 Day 6 Readouts of DNA, Protein | Readouts: DNA, Protein]] | ||
| | | Guest lecture from [http://openwetware.org/wiki/Endy_Lab Drew Endy]<br> [[Media:20.109(F09) M2D6 lab.pptx| NK lab handout]], [[Media:F09_M2D6-ANS.pdf | ANS lab notes]] | ||
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| [[User:Tyler Dewitt| TD]] | | [[User:Tyler Dewitt| TD]] | ||
| [[20.109(F09): Journal Club II| Journal Club II]] | | [[20.109(F09): Journal Club II| Journal Club II]] | ||
| | | [[Media:Research-article_OH-slides.pdf | ANS slides from 11/9 office hour]] | ||
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| colspan="7" | | | colspan="7" | | ||
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| [[User:Bridget Wall| BW]] | | [[User:Bridget Wall| BW]] | ||
| [[20.109(F09): Mod 3 Day 1 Growth of phage materials| Growth of phage materials]] | | [[20.109(F09): Mod 3 Day 1 Growth of phage materials| Growth of phage materials]] | ||
| Your [[20.109(F09): System engineering research article| Mod 2 research article]] is due before 11AM on the day you have lab | | Your [[20.109(F09): System engineering research article| Mod 2 research article]] is due before 11AM on the day you have lab<br> | ||
[[Media:20.109(F09) M3D1 labpix.pptx| NK lab handout]], [[Media:F09_M3D1-ANS.pdf | ANS lab notes]] | |||
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| [[User:Bridget Wall| BW]] | | [[User:Bridget Wall| BW]] | ||
| [[20.109(F09): Mod 3 Day 2 Phage nanowires| Phage nanowires]] | | [[20.109(F09): Mod 3 Day 2 Phage nanowires| Phage nanowires]] | ||
| | | [[Media:20.109(F09) M3D2 lab.pdf| NK lab handout]], [[Media:F09_M3D2-ANS.pdf | ANS lab notes]] | ||
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| [[User:Bridget Wall| BW]] | | [[User:Bridget Wall| BW]] | ||
| [[20.109(F09): Mod 3 Day 3 TEM| TEM]] | | [[20.109(F09): Mod 3 Day 3 TEM| TEM]] | ||
| | | [[Media:Trouble-shooting (2).ppt| troubleshooting ppt]] | ||
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| colspan="7" | | | colspan="7" | | ||
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| [[User:Bridget Wall| BW]] | | [[User:Bridget Wall| BW]] | ||
| [[20.109(F09): Mod 3 Day 4 Battery assembly| Battery assembly]] | | [[20.109(F09): Mod 3 Day 4 Battery assembly| Battery assembly]] | ||
| | | At the start of today's lecture, Linda Sutliff will offer tips for giving talks with a partner<br> | ||
[[Media:Proposing Biological Engineering Projects.pdf| Linda's lecture slides]]<br> | |||
[[Media:20.109(F09) M3D4 labpic.pptx| NK lab notes]] | |||
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| [[User:Bridget Wall| BW]] | | [[User:Bridget Wall| BW]] | ||
| [[20.109(F09): Mod 3 Day 5 Battery testing| Battery testing]] | | [[20.109(F09): Mod 3 Day 5 Battery testing| Battery testing]] | ||
| | | Guest Lecture Dr. Mark Allen<br>[[Media:12 3 MAA.ppt| lecture ppt]]and [[Media:BatteryLab Calculations DataProcessing.pdf| calculation info]]<br> | ||
[[Media:20.109(F09) M3D5 labpics.pdf| NK lab notes]], [[Media:F09_M3D2-ANS.pdf | ANS lab notes]]<br> | |||
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| [[User:Bridget Wall| BW]] | | [[User:Bridget Wall| BW]] | ||
| [[20.109(F09): Mod 3 Day 6 Oral presentations| Research proposal presentations]] | | [[20.109(F09): Mod 3 Day 6 Oral presentations| Research proposal presentations]] | ||
| | | We'll start this day in lab, 56-322, to finish off the BioMaterials module <br>[[Media:20 109 Battery Discharge Results (2).pptx| charge/discharge ppt]]and [[Media:Copy of 20 109 Consolidated Data(2).xlsx| data xls]] from John | ||
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Latest revision as of 09:56, 8 December 2009
FrontPage.jpg)
| MODULE | DAY | DATE | LECTURER | TA | LAB | note |
| Thur Sept 10 | NK | Orientation | Orientation lecture handout | |||
| 1 | 1 | Tue Sept 15 | BE | MSJ | DNA engineering using PCR | Lecture Handout |
| 1 | 2 | Thur Sept 17 | BE | MSJ | Clean and cut DNA | Neal/Linda/Atissa visit lab |
| 1 | 3 | Tue Sept 22 | BE | MSJ | Agarose gel electrophoresis | NK lab notes, ANS lab notes, Lecture Handout |
| 1 | 4 | Thur Sept 24 | BE | MSJ | DNA ligation and bacterial transformation | NK lab notes, ANS lab notes, Lecture Handout |
| 1 | 5 | Tue Sept 29 | BE | MSJ | Examine candidate clones | Christine from EHS visits lab |
| 1 | 6 | Thur Oct 1 | BE | MSJ | Restriction map and tissue culture | Neal/Linda visit lab for peer review exercise NK lab notes, ANS lab notes, Lecture notes, Michelle's Stats for TR lab |
| 1 | 7 | Tue Oct 6 | BE | MSJ | Lipofection | Mod 1 "progress report" due by 11AM on the day you have lab |
| 1 | 8 | Thur Oct 8 | BE | MSJ | FACS analysis | Lecture notes |
| Columbus Day Break Monday Oct 12 | No lab Tuesday and Wednesday | |||||
|---|---|---|---|---|---|---|
| 2 | 1 | Thurs Oct 15 | NK | TD | Testing an engineered biological system | Mod 1 "memo" is due by 11AM on the day you have lab M2D1 lecture handout NK lab notes, ANS lab notes |
| 2 | 2 | Tues Oct 20 | NK | TD | Measuring System Performance | M2D2 lecture handout NK lab notes, ANS lab notes |
| 2 | 3 | Thurs Oct 22 | NK | TD | Tools for System Engineering | M2D3 lecture handout NK lab notes, ANS lab notes |
| 2 | 4 | Tues Oct 27 | NK | TD | Journal Club I | We'll be starting and ending this day in the lab so meet in 56-322 |
| 2 | 5 | Thurs Oct 29 | NK | TD | Assessing re-tuned system | M2D5 lecture handout, ANS lab notes |
| 2 | 6 | Tues Nov 3 | NK | TD | Readouts: DNA, Protein | Guest lecture from Drew Endy NK lab handout, ANS lab notes |
| 2 | 7 | Thurs Nov 5 | NK | TD | Journal Club II | ANS slides from 11/9 office hour |
| Veteran's Day Break Wed Nov 11 | No lab Tuesday and Wednesday | |||||
| 3 | 1 | Thurs Nov 12 | AB | BW | Growth of phage materials | Your Mod 2 research article is due before 11AM on the day you have lab |
| 3 | 2 | Tues Nov 17 | AB | BW | Phage nanowires | NK lab handout, ANS lab notes |
| 3 | 3 | Thurs Nov 19 | AB | BW | TEM | troubleshooting ppt |
| Thanksgiving Break Nov 26, 27 | No lab or lecture all week | |||||
| 3 | 4 | Tues Dec 1 | AB | BW | Battery assembly | At the start of today's lecture, Linda Sutliff will offer tips for giving talks with a partner |
| 3 | 5 | Thurs Dec 3 | AB | BW | Battery testing | Guest Lecture Dr. Mark Allen lecture pptand calculation info |
| 3 | 6 | Tues Dec 8 | AB | BW | Research proposal presentations | We'll start this day in lab, 56-322, to finish off the BioMaterials module charge/discharge pptand data xls from John |
| Thurs Dec 10 | end of term celebration... | Lecture for class evaluations then lunch from noon-1:30 PM, no lab | ||||
