20.109(F10): Fall 2010 schedule: Difference between revisions
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(New page: {{Template:20.109(F10)}} <div style="padding: 10px; width: 640px; border: 5px solid #999999;"> {| border=1px |'''MODULE''' |'''DAY''' |'''DATE''' |'''LECTURER''' |'''TA''' |'''LAB''' |'''n...) |
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| [[20.109(F10):Lab tour | Orientation]] | | [[20.109(F10):Lab tour | Orientation]] | ||
| | | [[Media:20.109(F10) Orientation handout.pdf| Orientation Handout Fall 2010]] | ||
|-- | |-- | ||
| colspan="7" | | | colspan="7" | | ||
| Line 23: | Line 23: | ||
| 1 | | 1 | ||
| Tue Sept 14 | | Tue Sept 14 | ||
| [ | | [[Natalie Kuldell | NK]] and [[User:Michelle R. Sukup Jackson| MSJ]] | ||
| | | JG | ||
| [[20.109(F10): Mod 1 Day 1 DNA engineering using PCR | DNA engineering using PCR]] | | [[20.109(F10): Mod 1 Day 1 DNA engineering using PCR | DNA engineering using PCR]] | ||
| | | [[Media:20.109(F10) M1D1 lecture handout.pdf| M1D1 lecture handout]]<br>[[Media:20.109(F10) M1D1 labtalk.pdf| M1D1 lab talk]] | ||
|-- | |-- | ||
| 1 | | 1 | ||
| 2 | | 2 | ||
| Thur Sept 16 | | Thur Sept 16 | ||
| [ | | [[User:Michelle R. Sukup Jackson| MSJ]] | ||
| | | JG | ||
| [[20.109(F10): Mod 1 Day 2 Clean and cut DNA | Clean and cut DNA]] | |[[20.109(F10): Mod 1 Day 2 Clean and cut DNA | Clean and cut DNA]] | ||
| Neal/Linda/Atissa visit lab<br> | | Neal/Linda/Atissa visit lab[[Media:Intro Slides 20 109 Sept 2010.pdf| their slides are here]]<br> [[Media:BE109 Fall10 Mod1 Day2 Michelle.pdf| M1D2 lecture handout]]<br>[[Media:20.109(F10) M1D2 labtalk.pdf | M1D2 lab talk]] | ||
|-- | |-- | ||
| 1 | | 1 | ||
| 3 | | 3 | ||
| Tue Sept 21 | | Tue Sept 21 | ||
| [http://web.mit.edu/be/people/wittrup.shtml DW] | | [[Natalie Kuldell | NK]] and [http://web.mit.edu/be/people/wittrup.shtml DW] | ||
| | | JG | ||
| [[20.109(F10): Mod 1 Day 3 Agarose gel electrophoresis| Agarose gel electrophoresis]] | | [[20.109(F10): Mod 1 Day 3 Agarose gel electrophoresis| Agarose gel electrophoresis]] | ||
| | | [[Media:20.109(F10) M1D3 lecture.pdf| NK M1D3 lecture]] and [[Media:BRCA 20 109.pdf| DW M1D3 lecture]] and [[Media:20.109(F10) M1D3 labtalk.pdf| M1D3 lab talk]] | ||
|-- | |-- | ||
| 1 | | 1 | ||
| 4 | | 4 | ||
| Thur Sept 23 | | Thur Sept 23 | ||
| [ | | [[User:Orsolya_Kiraly | OK]] | ||
| | | JG | ||
| [[20.109(F10): Mod 1 Day 4 DNA ligations and bacterial transformations| DNA ligation and bacterial transformation]] | | [[20.109(F10): Mod 1 Day 4 DNA ligations and bacterial transformations| DNA ligation and bacterial transformation]] | ||
| | | [[Media:20.109(F10) M1D4 lecture.pdf| M1D4 lecture slides]]<br> [[Media:20.109(F10) M1D4 labtalk.pdf| M1D4 lab lecture]] | ||
|-- | |-- | ||
| 1 | | 1 | ||
| 5 | | 5 | ||
| Tue Sept 28 | | Tue Sept 28 | ||
| [ | | [[User:Orsolya_Kiraly | OK]] | ||
| | | JG | ||
| [[20.109(F10): Mod 1 Day 5 Examine candidate clones| Examine candidate clones]] | | [[20.109(F10): Mod 1 Day 5 Examine candidate clones| Examine candidate clones]] | ||
| EHS visits lab<br> | | [[Media:20.109(F10) M1D5 lecture.pdf| M1D5 lecture slides]]<br> [[Media:20.109(F10) M1D5labtalk.pdf| M1D5 lab lecture]]<br>[[Media:BE GEN BIO.pdf| EHS visits lab]]<br> | ||
|-- | |-- | ||
| 1 | | 1 | ||
| 6 | | 6 | ||
| Thur Sept 30 | | Thur Sept 30 | ||
| [ | | [[User:Orsolya_Kiraly | OK]] | ||
| | | JG | ||
| [[20.109(F10): Mod 1 Day 6 Restriction map and tissue culture | Restriction map and tissue culture]] | | [[20.109(F10): Mod 1 Day 6 Restriction map and tissue culture | Restriction map and tissue culture]] | ||
| Neal/Linda visit lab for peer review exercise<br> | | [[Media:20.109(F10) M1D6 lecture.pdf| M1D6 lecture slides]]<br> [[Media:20.109(F10) M1D6 labtalk.pdf| M1D6 lab lecture]]<br> Neal/Linda visit lab for peer review exercise<br> | ||
|-- | |-- | ||
| 1 | | 1 | ||
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| Tue Oct 5 | | Tue Oct 5 | ||
| [http://web.mit.edu/be/people/wittrup.shtml DW] | | [http://web.mit.edu/be/people/wittrup.shtml DW] | ||
| | | JG | ||
| [[20.109(F10): Mod 1 Day 7 Lipofection| Lipofection]] | | [[20.109(F10): Mod 1 Day 7 Lipofection| Lipofection]] | ||
| [[20.109(F10):DNA engineering "Progress Report"| Mod 1 "progress report"]] due by 11AM today <br> | | '''[[20.109(F10):DNA engineering "Progress Report"| Mod 1 "progress report"]] due by 11AM today''' <br>[[Media:20.109(F10) M1D7 lecture.pdf| M1D7 lecture slides]][[Media:BackgroundPapers Stats.pdf| and stats papers]]<br>[[Media:20.109(F10) M1D7 labtalk.ppt| M1D7 lab talk]]<br>[[Media:20.109(F10) M1D7 109StatsExercises.pptx | M1D7 lab stats talk pptx]][[Media:20.109(F10) M1D7 109StatsExercises.pdf| and as pdf]] | ||
|-- | |-- | ||
| 1 | | 1 | ||
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| Thur Oct 7 | | Thur Oct 7 | ||
| [http://web.mit.edu/be/people/wittrup.shtml DW] | | [http://web.mit.edu/be/people/wittrup.shtml DW] | ||
| | | JG | ||
| [[20.109(F10): Mod 1 Day 8 FACS analysis| FACS analysis]] | | [[20.109(F10): Mod 1 Day 8 FACS analysis| FACS analysis]] | ||
| [[20.109(F10) | | [[Media:20.109(F10) M1D8 lecture.pdf| M1D8 lecture slides]] | ||
|-- | |-- | ||
| colspan="7" | | | colspan="7" | | ||
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| | | | ||
! colspan="4" | Columbus Day Break Monday Oct | ! colspan="4" | Columbus Day Break Monday Oct 11 | ||
| '''No lab Tuesday''' | | '''No lab Tuesday, but [[20.109(F10):DNA engineering "P3"| Mod 1 "P3"]] is due by 11AM 10.13.10''' | ||
|-- | |-- | ||
| colspan="7" | | | colspan="7" | | ||
| Line 97: | Line 97: | ||
| Thurs Oct 14 | | Thurs Oct 14 | ||
| [[Natalie Kuldell | NK]] | | [[Natalie Kuldell | NK]] | ||
| | | [[User: Mark B. Smith| MS]] | ||
| [[20.109(F10): Mod 2 Day 1 Testing an engineered biological system| Testing an engineered biological system]] | | [[20.109(F10): Mod 2 Day 1 Testing an engineered biological system| Testing an engineered biological system]] | ||
| | | [[Media:20.109(F10) M2D1 Handout.pdf| M2D1 lecture handout]]<br>[[Media:20.109(F10) M1D1 LabTalk.pptx| M2D1 lab slides]] | ||
|-- | |-- | ||
| 2 | | 2 | ||
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| Tues Oct 19 | | Tues Oct 19 | ||
| [[Natalie Kuldell | NK]] | | [[Natalie Kuldell | NK]] | ||
| | | [[User: Mark B. Smith| MS]] | ||
| [[20.109(F10): Mod 2 Day 2 Measuring system performance | Measuring System Performance]] | | [[20.109(F10): Mod 2 Day 2 Measuring system performance | Measuring System Performance]] | ||
| | | [[Media:20.109(F10) M2D2 handout.pdf| M2D2 lecture handout]] <br> [[Media:20.109(F10) M2D2 labtalk.pptx| M2D2 lab slides]] | ||
|-- | |-- | ||
| 2 | | 2 | ||
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| Thurs Oct 21 | | Thurs Oct 21 | ||
| [[Natalie Kuldell | NK]] | | [[Natalie Kuldell | NK]] | ||
| | | [[User: Mark B. Smith| MS]] | ||
| [[20.109(F10): Mod 2 Day 3 Tools for system engineering | Tools for System Engineering]] | | [[20.109(F10): Mod 2 Day 3 Tools for system engineering | Tools for System Engineering]] | ||
| | | [[Media:20.109(F10) M2D3 handout.pdf| M2D3 lecture handout]]<br> [[Media:20.109(F10) M2D3 labtalk.pptx| M2D3 lab slides]] | ||
|-- | |-- | ||
| 2 | | 2 | ||
| 4 | | 4 | ||
| Tues Oct 26 | | Tues Oct 26 | ||
| [[ | | Journal Club | ||
| [[User: Mark B. Smith| MS]] | |||
| [[20.109(F10): Journal Club I| Journal Club I]] | | [[20.109(F10): Journal Club I| Journal Club I]] | ||
| We'll be | | We'll be having lecture at the regular time/place and then meeting in the lab for a few minutes starting at 1. | ||
|- | |- | ||
| 2 | | 2 | ||
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| Thurs Oct 28 | | Thurs Oct 28 | ||
| [[Natalie Kuldell | NK]] | | [[Natalie Kuldell | NK]] | ||
| | | [[User: Mark B. Smith| MS]] | ||
| [[20.109(F10): Mod 2 Day 5 Assessing re-tuned system | Assessing re-tuned system]] | | [[20.109(F10): Mod 2 Day 5 Assessing re-tuned system | Assessing re-tuned system]] | ||
| | | Neal and Linda visit lab for IMRD training<br>[[Media:20.109(F10) M2D5 handout.pdf| M2D5 lecture handout]] | ||
|-- | |-- | ||
| 2 | | 2 | ||
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| Tues Nov 2 | | Tues Nov 2 | ||
| [[Natalie Kuldell | NK]] | | [[Natalie Kuldell | NK]] | ||
| | | [[User: Mark B. Smith| MS]] | ||
| [[20.109(F10): Mod 2 Day 6 Readouts of DNA, Protein | | | [[20.109(F10): Mod 2 Day 6 Readouts of DNA, Protein | Readout: DNA]] | ||
| | | [[Media:20.109(F10) M2D6 handout.pdf| M2D6 lecture handout]] | ||
|-- | |-- | ||
| 2 | | 2 | ||
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| Thurs Nov 4 | | Thurs Nov 4 | ||
| [[Natalie Kuldell | NK]] | | [[Natalie Kuldell | NK]] | ||
| | | [[User: Mark B. Smith| MS]] | ||
| [[20.109(F10): | | [[20.109(F10): Mod 2 Day 7 Readout of Protein | Readout: Protein]] | ||
| | | [[Media:20.109(F10) M2D7 handout.pdf| M2D7 lecture handout]]<br>Bring your writing and your questions by the lab as needed | ||
|-- | |-- | ||
| 2 | | 2 | ||
| 8 | | 8 | ||
| Tues Nov 9 | | Tues Nov 9 | ||
| | | Journal Club | ||
| | |[[User: Mark B. Smith| MS]] | ||
| | | [[20.109(F10): Journal Club II| Journal Club II]] | ||
| | | | ||
|-- | |-- | ||
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! colspan="4" | Veteran's Day Break Thurs Nov 11 | ! colspan="4" | Veteran's Day Break Thurs Nov 11 | ||
| '''[[20.109(F10): System engineering research article| Mod 2 research article]] is due by | | '''[[20.109(F10): System engineering research article| Mod 2 research article]] is due by 11:59PM on 11.11.10 <br>''' | ||
|-- | |-- | ||
| colspan="7" | | | colspan="7" | | ||
| Line 170: | Line 170: | ||
| Tues Nov 16 | | Tues Nov 16 | ||
| [[User:Abelcher| AB]] | | [[User:Abelcher| AB]] | ||
| | | [[User: JCasey4| JC]] | ||
| [[20.109(F10): Mod 3 Day 1 Growth of phage materials| Growth of phage materials]] | | [[20.109(F10): Mod 3 Day 1 Growth of phage materials| Growth of phage materials]] | ||
| | | [[Media:20.109(F10) M3D1 lablecture.pptx| M3D1 lab lecture]] | ||
|-- | |-- | ||
| 3 | | 3 | ||
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| Thurs Nov 18 | | Thurs Nov 18 | ||
| [[User:Abelcher| AB]] | | [[User:Abelcher| AB]] | ||
| | | [[User: JCasey4| JC]] | ||
| [[20.109(F10): Mod 3 Day 2 Phage nanowires| Phage nanowires]] | | [[20.109(F10): Mod 3 Day 2 Phage nanowires| Phage nanowires]] | ||
| | | | ||
| Line 186: | Line 186: | ||
| Tues Nov 23 | | Tues Nov 23 | ||
| [[User:Abelcher| AB]] | | [[User:Abelcher| AB]] | ||
| | | [[User: JCasey4| JC]] | ||
| [[20.109(F10): Mod 3 Day 3 TEM| TEM]] | | [[20.109(F10): Mod 3 Day 3 TEM| TEM]] | ||
| | | | ||
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| Tues Nov 30 | | Tues Nov 30 | ||
| [[User:Abelcher| AB]] | | [[User:Abelcher| AB]] | ||
| | | [[User: JCasey4| JC]] | ||
| [[20.109(F10): Mod 3 Day 4 Battery assembly| Battery assembly]] | | [[20.109(F10): Mod 3 Day 4 Battery assembly| Battery assembly]] | ||
| | | [[Media:20.109 Battery Lecture, 30NOV10.pptx| John's lecture slides]]<br>[[Media:20.109(F10) M3D4 lab.pdf| M3D4 lab lecture]]<br>Atissa will visit lab @4PM to offer tips for giving talks with a partner<br> | ||
|-- | |-- | ||
| 3 | | 3 | ||
| Line 211: | Line 211: | ||
| Thurs Dec 2 | | Thurs Dec 2 | ||
| [[User:Abelcher| AB]] | | [[User:Abelcher| AB]] | ||
| | | [[User: JCasey4| JC]] | ||
| [[20.109(F10): Mod 3 Day 5 Battery testing| Battery testing]] | | [[20.109(F10): Mod 3 Day 5 Battery testing| Battery testing]] | ||
| | | | ||
| Line 219: | Line 219: | ||
| Tues Dec 7 | | Tues Dec 7 | ||
| [[User:Abelcher| AB]] | | [[User:Abelcher| AB]] | ||
| | | [[User: JCasey4| JC]] | ||
| [[20.109(F10): Mod 3 Day 6 Oral presentations| Research proposal presentations]] | | [[20.109(F10): Mod 3 Day 6 Oral presentations| Research proposal presentations]] | ||
| We'll start this day in lab, 56-322, to finish off the BioMaterials module <br> | | We'll start this day in lab, 56-322, to finish off the BioMaterials module <br> | ||
| Line 229: | Line 229: | ||
| | | | ||
| end of term celebration... | | end of term celebration... | ||
| Lecture for class evaluations then lunch from | | Lecture for class evaluations then lunch from 11:30-1 PM, 56-614, no lab | ||
|} | |} | ||
</div> | </div> | ||
Latest revision as of 12:44, 30 November 2010
| MODULE | DAY | DATE | LECTURER | TA | LAB | note |
| Thur Sept 9 | NK | Orientation | Orientation Handout Fall 2010 | |||
| 1 | 1 | Tue Sept 14 | NK and MSJ | JG | DNA engineering using PCR | M1D1 lecture handout M1D1 lab talk |
| 1 | 2 | Thur Sept 16 | MSJ | JG | Clean and cut DNA | Neal/Linda/Atissa visit lab their slides are here M1D2 lecture handout M1D2 lab talk |
| 1 | 3 | Tue Sept 21 | NK and DW | JG | Agarose gel electrophoresis | NK M1D3 lecture and DW M1D3 lecture and M1D3 lab talk |
| 1 | 4 | Thur Sept 23 | OK | JG | DNA ligation and bacterial transformation | M1D4 lecture slides M1D4 lab lecture |
| 1 | 5 | Tue Sept 28 | OK | JG | Examine candidate clones | M1D5 lecture slides M1D5 lab lecture EHS visits lab |
| 1 | 6 | Thur Sept 30 | OK | JG | Restriction map and tissue culture | M1D6 lecture slides M1D6 lab lecture Neal/Linda visit lab for peer review exercise |
| 1 | 7 | Tue Oct 5 | DW | JG | Lipofection | Mod 1 "progress report" due by 11AM today M1D7 lecture slides and stats papers M1D7 lab talk M1D7 lab stats talk pptx and as pdf |
| 1 | 8 | Thur Oct 7 | DW | JG | FACS analysis | M1D8 lecture slides |
| Columbus Day Break Monday Oct 11 | No lab Tuesday, but Mod 1 "P3" is due by 11AM 10.13.10 | |||||
|---|---|---|---|---|---|---|
| 2 | 1 | Thurs Oct 14 | NK | MS | Testing an engineered biological system | M2D1 lecture handout M2D1 lab slides |
| 2 | 2 | Tues Oct 19 | NK | MS | Measuring System Performance | M2D2 lecture handout M2D2 lab slides |
| 2 | 3 | Thurs Oct 21 | NK | MS | Tools for System Engineering | M2D3 lecture handout M2D3 lab slides |
| 2 | 4 | Tues Oct 26 | Journal Club | MS | Journal Club I | We'll be having lecture at the regular time/place and then meeting in the lab for a few minutes starting at 1. |
| 2 | 5 | Thurs Oct 28 | NK | MS | Assessing re-tuned system | Neal and Linda visit lab for IMRD training M2D5 lecture handout |
| 2 | 6 | Tues Nov 2 | NK | MS | Readout: DNA | M2D6 lecture handout |
| 2 | 7 | Thurs Nov 4 | NK | MS | Readout: Protein | M2D7 lecture handout Bring your writing and your questions by the lab as needed |
| 2 | 8 | Tues Nov 9 | Journal Club | MS | Journal Club II | |
| Veteran's Day Break Thurs Nov 11 | Mod 2 research article is due by 11:59PM on 11.11.10 | |||||
| 3 | 1 | Tues Nov 16 | AB | JC | Growth of phage materials | M3D1 lab lecture |
| 3 | 2 | Thurs Nov 18 | AB | JC | Phage nanowires | |
| 3 | 3 | Tues Nov 23 | AB | JC | TEM | |
| Thanksgiving Break Nov 25, 26 | No lab or lecture | |||||
| 3 | 4 | Tues Nov 30 | AB | JC | Battery assembly | John's lecture slides M3D4 lab lecture Atissa will visit lab @4PM to offer tips for giving talks with a partner |
| 3 | 5 | Thurs Dec 2 | AB | JC | Battery testing | |
| 3 | 6 | Tues Dec 7 | AB | JC | Research proposal presentations | We'll start this day in lab, 56-322, to finish off the BioMaterials module |
| Thurs Dec 9 | end of term celebration... | Lecture for class evaluations then lunch from 11:30-1 PM, 56-614, no lab | ||||
