20.109(S09) TR-yellow Mod3-proposal: Difference between revisions

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==Background==
==Background==


==04/21/2009 Meeting minutes==
==04/21/2009 Meeting minutes==
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===Experimental steps:===
===Experimental steps:===
1. pick prion disease (mad cow)
1. pick prion disease (eg. mad cow)
2. knockdown expression of normal protein in (bovinized) mice, see if essential
2. knockdown expression of normal protein in (bovinized) mice, see if essential
3. expose to knockdown mice to prion pathogen
3. expose to knockdown mice to prion pathogen
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c. to what it binds, etc
c. to what it binds, etc


===Papers===
===Papers to discuss next time===
# Kong, Q. [http://www.ncbi.nlm.nih.gov/pubmed/17143323 RNAi: a novel strategy for the treatment of prion diseases.] J Clin Invest. 2006 Dec;116(12):3101-3.
# Pfiefer et al. [http://www.ncbi.nlm.nih.gov/pubmed/17143329?ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_RVAbstractPlus Lentivector-mediated RNAi efficiently suppresses prion protein and prolongs survival of scrapie-infected mice.] J Clin Invest. 2006 Dec;116(12):3204-10
# Mallucci et al. [http://www.ncbi.nlm.nih.gov/pubmed/17270731 Targeting cellular prion protein reverses early cognitive deficits and neurophysiological dysfunction in prion-infected mice.] Neuron. 2007 Feb 1;53(3):325-35.
# Sutou et al. [http://www.ncbi.nlm.nih.gov/pubmed/17655742?ordinalpos=16&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DefaultReportPanel.Pubmed_RVDocSum Knockdown of the bovine prion gene PRNP by RNA interference (RNAi) technology.] BMC Biotechnol. 2007 Jul 26;7:44.
# Meslin et al. [http://www.ncbi.nlm.nih.gov/pubmed/18006836?ordinalpos=13&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DefaultReportPanel.Pubmed_RVDocSum Silencing of prion protein sensitizes breast adriamycin-resistant carcinoma cells to TRAIL-mediated cell death.] Cancer Res. 2007 Nov 15;67(22):10910-9.
# White et al. [http://www.ncbi.nlm.nih.gov/pubmed/18632556?ordinalpos=9&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DefaultReportPanel.Pubmed_RVDocSum Single treatment with RNAi against prion protein rescues early neuronal dysfunction and prolongs survival in mice with prion disease.] Proc Natl Acad Sci U S A. 2008 Jul 22;105(29):10238-43. Epub 2008 Jul 16.


[http://www.ncbi.nlm.nih.gov/pubmed/18632556?ordinalpos=9&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DefaultReportPanel.Pubmed_RVDocSum Single treatment with RNAi against prion protein rescues early neuronal dysfunction and prolongs survival in mice with prion disease.]
[http://www.ncbi.nlm.nih.gov/pubmed/18006836?ordinalpos=13&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DefaultReportPanel.Pubmed_RVDocSum Silencing of prion protein sensitizes breast adriamycin-resistant carcinoma cells to TRAIL-mediated cell death.]
[http://www.ncbi.nlm.nih.gov/pubmed/17655742?ordinalpos=16&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DefaultReportPanel.Pubmed_RVDocSum Knockdown of the bovine prion gene PRNP by RNA interference (RNAi) technology.]
[http://www.ncbi.nlm.nih.gov/pubmed/17143329?ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_RVAbstractPlus Lentivector-mediated RNAi efficiently suppresses prion protein and prolongs survival of scrapie-infected mice.]


==05/03/2009 Meeting Minutes==
==05/03/2009 Meeting Minutes==
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** FFI (Fatal Familial Insomnia)
** FFI (Fatal Familial Insomnia)
** Kuru
** Kuru
** Gertsmann-Straussler-Scheinker syndrom (GSS)
** Gertsmann-Straussler-Scheinker syndrome (GSS)
 
==Most relevant papers==
* [http://www.ncbi.nlm.nih.gov/pubmed/18632556?ordinalpos=9&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DefaultReportPanel.Pubmed_RVDocSum Single treatment with RNAi against prion protein rescues early neuronal dysfunction and prolongs survival in mice with prion disease.]
** This paper pretty much paves the way for our work
** Summary: Treated prion-infected mice with lentiviral siRNA which was injected into the brain. Lentiviral treated mice lived longer than untreated ones.
* [http://www.ncbi.nlm.nih.gov/pubmed/17143329?ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_RVAbstractPlus Lentivector-mediated RNAi efficiently suppresses prion protein and prolongs survival of scrapie-infected mice.]
** This paper was the first to successfully do lentivector-mediated RNAi treatment in prion-infected mice
** Summary: infected cells with scrapie, created chimeric mice. Treated those with siRNA that was injected into the striatum.

Revision as of 07:36, 3 May 2009

Resources

prions

Idea

  • Do a time course analysis of human diseases, see if knockdown of expression of just one protein can be used to treat multiple prion diseases.
  • Treat the whole brain (ie global treatment instead of local treatment)

Background

04/21/2009 Meeting minutes

Idea: siRNA knockdown of prion

Experimental steps:

1. pick prion disease (eg. mad cow) 2. knockdown expression of normal protein in (bovinized) mice, see if essential 3. expose to knockdown mice to prion pathogen

Our next steps:

1. research mad cow disease a. mechanism b. how it comes up as a disease c. to what it binds, etc

Papers to discuss next time

  1. Kong, Q. RNAi: a novel strategy for the treatment of prion diseases. J Clin Invest. 2006 Dec;116(12):3101-3.
  2. Pfiefer et al. Lentivector-mediated RNAi efficiently suppresses prion protein and prolongs survival of scrapie-infected mice. J Clin Invest. 2006 Dec;116(12):3204-10
  3. Mallucci et al. Targeting cellular prion protein reverses early cognitive deficits and neurophysiological dysfunction in prion-infected mice. Neuron. 2007 Feb 1;53(3):325-35.
  4. Sutou et al. Knockdown of the bovine prion gene PRNP by RNA interference (RNAi) technology. BMC Biotechnol. 2007 Jul 26;7:44.
  5. Meslin et al. Silencing of prion protein sensitizes breast adriamycin-resistant carcinoma cells to TRAIL-mediated cell death. Cancer Res. 2007 Nov 15;67(22):10910-9.
  6. White et al. Single treatment with RNAi against prion protein rescues early neuronal dysfunction and prolongs survival in mice with prion disease. Proc Natl Acad Sci U S A. 2008 Jul 22;105(29):10238-43. Epub 2008 Jul 16.


05/03/2009 Meeting Minutes

Possible experiments

  • want to see if all human prion diseases (which are various mutations in PrnP) can be cured via knockdown of PrnPC with siRNA
    • Creuztfeldt-Jakob Disease (CJD)
    • FFI (Fatal Familial Insomnia)
    • Kuru
    • Gertsmann-Straussler-Scheinker syndrome (GSS)

Most relevant papers