20.109(S15): Spring 2015 schedule: Difference between revisions
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| Tue/Wed Feb 4 | | Tue/Wed Feb 3/4 | ||
| [[User: | | [[User:Shannon K. Alford | SKH]] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Lab tour | Orientation]] | | [[20.109(S14):Lab tour | Orientation]] | ||
| [[Media:20.109 OrientLect(S14).pdf | Introductory Lecture (PDF)]]<br>[[Media:M1D0_F14_SKH_prelab_final.pdf | T/R Pre-Lab]]<br>[[Media:S14_D0-ANS.pdf| W/F Pre-Lab]] | | [[Media:20.109 OrientLect(S14).pdf | Introductory Lecture (PDF)]]<br>[[Media:M1D0_F14_SKH_prelab_final.pdf | T/R Pre-Lab]]<br>[[Media:S14_D0-ANS.pdf| W/F Pre-Lab]] | ||
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| 1 | | 1 | ||
| 1 | | 1 | ||
| Thur/Fri Feb 6 | | Thur/Fri Feb 5/6 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Microbial DNA extraction (Day1) | Microbial DNA extraction]] | | [[20.109(S14):Microbial DNA extraction (Day1) | Microbial DNA extraction]] | ||
|<font color=green>lab orientation quiz</font color><br>[[Media:S14_M1D1-Lecture.pdf | Lecture]]<br>[[Media: S14M1-JonR_Lecture1_Outline.doc | L1 Notes]]<br>[[Media:M1D1_S14_lab_SKH_final.pdf | T/R Pre-Lab]] <br>[[Media:S14_M1D1-ANS.pdf | W/F Pre-Lab]] | |<font color=green>lab orientation quiz</font color><br>[[Media:S14_M1D1-Lecture.pdf | Lecture]]<br>[[Media: S14M1-JonR_Lecture1_Outline.doc | L1 Notes]]<br>[[Media:M1D1_S14_lab_SKH_final.pdf | T/R Pre-Lab]] <br>[[Media:S14_M1D1-ANS.pdf | W/F Pre-Lab]] | ||
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| 1 | | 1 | ||
| 2 | | 2 | ||
| Tue/Wed Feb 11 | | Tue/Wed Feb 10/11 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Diagnostic primer design (Day2) | Diagnostic primer design]] | | [[20.109(S14):Diagnostic primer design (Day2) | Diagnostic primer design]] | ||
| [[Media:S14_M1D2-Lecture.pdf | Lecture]]<br>[[Media: S14M1-JonR_Lecture2_Outline.doc | L2 Notes]]<br>[[Media:M1D2_S14_SKH_final.pdf | T/R Pre-lab]]<br>[[Media:S14_M1D2-ANS.pdf | W/F Pre-Lab]] | | [[Media:S14_M1D2-Lecture.pdf | Lecture]]<br>[[Media: S14M1-JonR_Lecture2_Outline.doc | L2 Notes]]<br>[[Media:M1D2_S14_SKH_final.pdf | T/R Pre-lab]]<br>[[Media:S14_M1D2-ANS.pdf | W/F Pre-Lab]] | ||
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| 1 | | 1 | ||
| 3 | | 3 | ||
| Thur/Fri Feb 13 | | Thur/Fri Feb 12/13 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):16S PCR and paper discussion (Day3)| 16S PCR and paper discussion]] | | [[20.109(S14):16S PCR and paper discussion (Day3)| 16S PCR and paper discussion]] | ||
| <font color=green>lab quiz</font color><br>[[Media:S14_M1D3-Lecture.pdf | Lecture]]<br>[[Media: S14M1-JonR_Lecture3_Outline.docx | L3 Notes]]<br>[[Media:M1D3_S14_SKH_final.pdf | T/R Pre-lab]]<br>[[Media:S14_M1D3-ANS.pdf | W/F Pre-Lab]]<br>[[Media:20.109_Presentation-basics_S14_Atissa.pdf | WAC lecture, talks]] | | <font color=green>lab quiz</font color><br>[[Media:S14_M1D3-Lecture.pdf | Lecture]]<br>[[Media: S14M1-JonR_Lecture3_Outline.docx | L3 Notes]]<br>[[Media:M1D3_S14_SKH_final.pdf | T/R Pre-lab]]<br>[[Media:S14_M1D3-ANS.pdf | W/F Pre-Lab]]<br>[[Media:20.109_Presentation-basics_S14_Atissa.pdf | WAC lecture, talks]] | ||
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! colspan="4" | President's Day Feb | ! colspan="4" | President's Day Feb 16 | ||
| '''No lab Feb | | '''No lab Feb 17 or Feb 18''' | ||
|-- | |-- | ||
| 1 | | 1 | ||
| 4 | | 4 | ||
| Thur/Fri Feb 20 | | Thur/Fri Feb 19/20 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):DNA cloning (Day4)| DNA cloning]] | | [[20.109(S14):DNA cloning (Day4)| DNA cloning]] | ||
| [[Media: S14M1-JonR_Lecture4_Outline.doc | L4 Notes]]<br>[[Media:M1D4_S14_SKH_final.pdf | T/R Pre-lab]]<br>[[Media:S14_M1D4-ANS.pdf | W/F Pre-Lab]]<br>[[Media:20.109_FIG_CAPTIONS_S14_Marilee.pdf | WAC lecture, figures]] | | [[Media: S14M1-JonR_Lecture4_Outline.doc | L4 Notes]]<br>[[Media:M1D4_S14_SKH_final.pdf | T/R Pre-lab]]<br>[[Media:S14_M1D4-ANS.pdf | W/F Pre-Lab]]<br>[[Media:20.109_FIG_CAPTIONS_S14_Marilee.pdf | WAC lecture, figures]] | ||
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| 1 | | 1 | ||
| 5 | | 5 | ||
| Tue/Wed Feb 25 | | Tue/Wed Feb 24/25 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):DNA sequencing (Day5)| DNA sequencing]] | | [[20.109(S14):DNA sequencing (Day5)| DNA sequencing]] | ||
|<font color=green>lab quiz</font color><br>[[Media:S14_M1D5-Lecture.pptx.pdf | Lecture]]<br>[[Media:Module1_Lecture5_LectureOutline.docx | L5 notes]]<br>[[Media:S14_M1D5_AKR_TR_filled.pdf | T/R Pre-lab]]<br>[[Media:S14_M1D5_AKR_WF_filled.pdf | W/F Pre-lab]] | |<font color=green>lab quiz</font color><br>[[Media:S14_M1D5-Lecture.pptx.pdf | Lecture]]<br>[[Media:Module1_Lecture5_LectureOutline.docx | L5 notes]]<br>[[Media:S14_M1D5_AKR_TR_filled.pdf | T/R Pre-lab]]<br>[[Media:S14_M1D5_AKR_WF_filled.pdf | W/F Pre-lab]] | ||
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| 1 | | 1 | ||
| 6 | | 6 | ||
| Thur/Fri Feb 27 | | Thur/Fri Feb 26/27 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Journal club I (Day6)| Journal club I]] | | [[20.109(S14):Journal club I (Day6)| Journal club I]] | ||
| [[Media:S14_M1D6-Lecture.pptx.pdf | Lecture]]<br>[[Media:Module1_Lecture6_LectureOutline.doc | L6 notes]] | | [[Media:S14_M1D6-Lecture.pptx.pdf | Lecture]]<br>[[Media:Module1_Lecture6_LectureOutline.doc | L6 notes]] | ||
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| 1 | | 1 | ||
| 7 | | 7 | ||
| Tue/Wed Mar 4 | | Tue/Wed Mar 3/4 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Phylogenetic and primer analyses (Day7)| Phylogenetic and primer analyses]] | | [[20.109(S14):Phylogenetic and primer analyses (Day7)| Phylogenetic and primer analyses]] | ||
| [[Media: S14_M1D7-Lecture.pptx.pdf | Lecture]]<br>[[Media:M1D7_S14_SKH_final.pdf|T/R Pre-lab]]<br>[[Media:S14_M1D7-ANS.pdf | W/F Pre-Lab]] | | [[Media: S14_M1D7-Lecture.pptx.pdf | Lecture]]<br>[[Media:M1D7_S14_SKH_final.pdf|T/R Pre-lab]]<br>[[Media:S14_M1D7-ANS.pdf | W/F Pre-Lab]] | ||
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| 1 | | 1 | ||
| 8 | | 8 | ||
| Thur/Fri Mar 6 | | Thur/Fri Mar 5/6 | ||
|[http://web.mit.edu/be/people/runstadler.shtml JR] | |[http://web.mit.edu/be/people/runstadler.shtml JR] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Journal club II (Day8)| Journal club II]] | | [[20.109(S14):Journal club II (Day8)| Journal club II]] | ||
|<font color=green>lab quiz</font color><br>[[Media: S14_M1D8-Lecture-AdditionalSlides.pptx.pdf | Lecture]]<br>[[Media: S14M1-JonR_Lecture7-8_Outline.doc | L7/8 notes]]<br>[[Media:20.109_Abstract_SP14.pdf | WAC lecture, abstracts]] | |<font color=green>lab quiz</font color><br>[[Media: S14_M1D8-Lecture-AdditionalSlides.pptx.pdf | Lecture]]<br>[[Media: S14M1-JonR_Lecture7-8_Outline.doc | L7/8 notes]]<br>[[Media:20.109_Abstract_SP14.pdf | WAC lecture, abstracts]] | ||
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| 2 | | 2 | ||
| 1 | | 1 | ||
| Tue/Wed Mar 11 | | Tue/Wed Mar 10/11 | ||
| [http://web.mit.edu/be/people/samson.shtml LS] | | [http://web.mit.edu/be/people/samson.shtml LS] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Introduction to cell strains and plating (Day1)| Introduction to cell strains and plating]] | | [[20.109(S14):Introduction to cell strains and plating (Day1)| Introduction to cell strains and plating]] | ||
| [[Media:20109_S14-M2Lec1_LSamson.pdf | Lecture]]<br>[[Media:M2D1_S14_SKH_final.pdf|T/R Prelab]]<br>[[Media:S14_M2D1-ANS.pdf | W/F Pre-Lab]]<br>[[Media:20.109_IMRD_SP14a.pdf | WAC lecture, IMRD]]<br><font color = CC0000><b>Draft Mod 1 Abstract and Summary Due WED 1 PM</b></font color><br> | | [[Media:20109_S14-M2Lec1_LSamson.pdf | Lecture]]<br>[[Media:M2D1_S14_SKH_final.pdf|T/R Prelab]]<br>[[Media:S14_M2D1-ANS.pdf | W/F Pre-Lab]]<br>[[Media:20.109_IMRD_SP14a.pdf | WAC lecture, IMRD]]<br><font color = CC0000><b>Draft Mod 1 Abstract and Summary Due WED 1 PM</b></font color><br> | ||
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| 2 | | 2 | ||
| 2 | | 2 | ||
| Thur/Fri Mar 13 | | Thur/Fri Mar 12/13 | ||
| [http://web.mit.edu/be/people/samson.shtml LS] | | [http://web.mit.edu/be/people/samson.shtml LS] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Begin Western protein analysis (Day2)| Begin Western protein analysis]] | | [[20.109(S14):Begin Western protein analysis (Day2)| Begin Western protein analysis]] | ||
|[[Media:20109_S14-M2Lec2_LSamson.pdf | Lecture]]<br>[[Media:M2D2_S14_SKH_final.pdf|T/R Prelab]]<br>[[Media:S14_M2D2-ANS.pdf | W/F Pre-Lab]] | |[[Media:20109_S14-M2Lec2_LSamson.pdf | Lecture]]<br>[[Media:M2D2_S14_SKH_final.pdf|T/R Prelab]]<br>[[Media:S14_M2D2-ANS.pdf | W/F Pre-Lab]] | ||
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| 2 | | 2 | ||
| 3 | | 3 | ||
| Tue/Wed Mar 18 | | Tue/Wed Mar 17/18 | ||
| [http://web.mit.edu/be/people/samson.shtml LS] | | [http://web.mit.edu/be/people/samson.shtml LS] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14): Choose system conditions and paper discussion (Day3)| Choose system conditions and paper discussion]] | | [[20.109(S14): Choose system conditions and paper discussion (Day3)| Choose system conditions and paper discussion]] | ||
|<br><font color = CC0000><b>Mod 1 Memo Due</b></font color><br><font color=green>lab quiz</font color><br>[[Media:20109_S14-M2Lec3_LSamson.pdf | Lecture]]<br>[[Media:M2D3_S14_SKH_final.pdf | T/R Pre-Lab]]<br>[[Media:S14_M2D3-ANS.pdf | W/F Pre-Lab]] | |<br><font color = CC0000><b>Mod 1 Memo Due</b></font color><br><font color=green>lab quiz</font color><br>[[Media:20109_S14-M2Lec3_LSamson.pdf | Lecture]]<br>[[Media:M2D3_S14_SKH_final.pdf | T/R Pre-Lab]]<br>[[Media:S14_M2D3-ANS.pdf | W/F Pre-Lab]] | ||
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| 2 | | 2 | ||
| 4 | | 4 | ||
| Thur/Fri Mar 20 | | Thur/Fri Mar 19/20 | ||
| [http://web.mit.edu/be/people/samson.shtml LS] | | [http://web.mit.edu/be/people/samson.shtml LS] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Complete Western and prepare damaged DNA (Day4)| Complete Western and prepare damaged DNA]] | | [[20.109(S14):Complete Western and prepare damaged DNA (Day4)| Complete Western and prepare damaged DNA]] | ||
| [[Media:20109_S14-M2Lec4_LSamson.pdf | Lecture]]<br>[[Media:M2D4_S14_SKH_final.pdf| T/R Pre-lab]]<br>[[Media:S14_M2D4-ANS.pdf | W/F Pre-Lab]] | | [[Media:20109_S14-M2Lec4_LSamson.pdf | Lecture]]<br>[[Media:M2D4_S14_SKH_final.pdf| T/R Pre-lab]]<br>[[Media:S14_M2D4-ANS.pdf | W/F Pre-Lab]] | ||
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! colspan="4" | Spring Break Mar | ! colspan="4" | Spring Break Mar 23-27 | ||
| '''No lab all week''' | | '''No lab all week''' | ||
|-- | |-- | ||
| 2 | | 2 | ||
| 5 | | 5 | ||
| Tue/Wed Apr 1 | | Tue/Wed Mar/Apr 31/1 | ||
| [http://web.mit.edu/be/people/samson.shtml LS] | | [http://web.mit.edu/be/people/samson.shtml LS] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Cell preparation for DNA repair assays (Day5)| Cell preparation for DNA repair assays]] | | [[20.109(S14):Cell preparation for DNA repair assays (Day5)| Cell preparation for DNA repair assays]] | ||
|<font color=green>lab quiz</font color><br>[[Media:20109_S14-M2Lec5_LSamson.pdf | Lecture]]<br>[[Media:M2D5_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M2D5-ANS.pdf | W/F Pre-Lab]] | |<font color=green>lab quiz</font color><br>[[Media:20109_S14-M2Lec5_LSamson.pdf | Lecture]]<br>[[Media:M2D5_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M2D5-ANS.pdf | W/F Pre-Lab]] | ||
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| 2 | | 2 | ||
| 6 | | 6 | ||
| Thur/Fri Apr 3 | | Thur/Fri Apr 2/3 | ||
| [http://web.mit.edu/be/people/samson.shtml LS] | | [http://web.mit.edu/be/people/samson.shtml LS] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):DNA repair assays(Day6)| DNA repair assays]] | | [[20.109(S14):DNA repair assays(Day6)| DNA repair assays]] | ||
|[[Media:20109_S14-M2Lec6_LSamson.pdf | Lecture]]<br>[[Media:M2D6_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M2D6-ANS.pdf | W/F Pre-Lab]]<br><font color = CC0000><b>Final Mod 1 Abstract and Summary Due</b></font color><br> | |[[Media:20109_S14-M2Lec6_LSamson.pdf | Lecture]]<br>[[Media:M2D6_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M2D6-ANS.pdf | W/F Pre-Lab]]<br><font color = CC0000><b>Final Mod 1 Abstract and Summary Due</b></font color><br> | ||
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| 2 | | 2 | ||
| 7 | | 7 | ||
| Tue/Wed Apr 8 | | Tue/Wed Apr 7/8 | ||
| [http://web.mit.edu/be/people/samson.shtml LS] | | [http://web.mit.edu/be/people/samson.shtml LS] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Data analysis (Day7)| Data analysis]] | | [[20.109(S14):Data analysis (Day7)| Data analysis]] | ||
|<font color=green>lab quiz</font color><br>[[Media:ZDN_Module_Lecture_4-8-14.pdf| Lecture]]<br>[[Media:M2D7_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M2D7-ANS.pdf | W/F Pre-Lab]] | |<font color=green>lab quiz</font color><br>[[Media:ZDN_Module_Lecture_4-8-14.pdf| Lecture]]<br>[[Media:M2D7_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M2D7-ANS.pdf | W/F Pre-Lab]] | ||
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| 3 | | 3 | ||
| 1 | | 1 | ||
| Thur/Fri Apr 10 | | Thur/Fri Apr 9/10 | ||
| [[User:AgiStachowiak | ANS]] | | [[User:AgiStachowiak | ANS]] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Design experiment (Day1)| Design experiment]] | | [[20.109(S14):Design experiment (Day1)| Design experiment]] | ||
| [[Media: 20109_S14-M3Lec1_AStachowiak.pdf | Lecture]]<br>[[Media: M3D1_S14_SKH_final.pdf | T/R Pre-Lab]] <br>[[Media:S14_M3D1-ANS.pdf | W/F Pre-Lab]] | | [[Media: 20109_S14-M3Lec1_AStachowiak.pdf | Lecture]]<br>[[Media: M3D1_S14_SKH_final.pdf | T/R Pre-Lab]] <br>[[Media:S14_M3D1-ANS.pdf | W/F Pre-Lab]] | ||
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| 3 | | 3 | ||
| 2 | | 2 | ||
| Tue/Wed Apr 15 | | Tue/Wed Apr 14/15 | ||
| [[User:AgiStachowiak | ANS]] | | [[User:AgiStachowiak | ANS]] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Initiate cell culture (Day2)| Initiate cell culture]] | | [[20.109(S14):Initiate cell culture (Day2)| Initiate cell culture]] | ||
| <font color=green>lab quiz</font color><br>[[Media: 20109_S14-M3Lec2_AStachowiak.pdf | Lecture]]<br> | | <font color=green>lab quiz</font color><br>[[Media: 20109_S14-M3Lec2_AStachowiak.pdf | Lecture]]<br> | ||
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| 3 | | 3 | ||
| 3 | | 3 | ||
| Thur/Fri Apr 17 | | Thur/Fri Apr 16/17 | ||
| [[User:AgiStachowiak | ANS]] | | [[User:AgiStachowiak | ANS]] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Testing cell viability (Day3)| Testing cell viability]] | | [[20.109(S14):Testing cell viability (Day3)| Testing cell viability]] | ||
| [[Media: 20109_S14-M3Lec3_AStachowiak.pdf | Lecture]]<br> | | [[Media: 20109_S14-M3Lec3_AStachowiak.pdf | Lecture]]<br> | ||
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! colspan="4" | Patriot's Day April 21 | ! colspan="4" | Patriot's Day April 20-21 | ||
| '''No lab Apr | | '''No lab Apr 21 or Apr 22''' <br><font color = CC0000><b>Mod 2 Report Due</b></font color><br> | ||
| | | | ||
|-- | |-- | ||
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| 3 | | 3 | ||
| 4 | | 4 | ||
| Thu/Fri Apr 24 | | Thu/Fri Apr 23/24 | ||
| [[User:AgiStachowiak | ANS]] | | [[User:AgiStachowiak | ANS]] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Preparing cells for analysis (Day4)| Preparing cells for analysis]] | | [[20.109(S14):Preparing cells for analysis (Day4)| Preparing cells for analysis]] | ||
| <font color=green>lab quiz</font color><br>[[Media: 20109_S14-M3Lec4_AStachowiak.pdf | Lecture]]<br>[[Media:M3D4_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M3D4-ANS.pdf | W/F Pre-Lab]] | | <font color=green>lab quiz</font color><br>[[Media: 20109_S14-M3Lec4_AStachowiak.pdf | Lecture]]<br>[[Media:M3D4_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M3D4-ANS.pdf | W/F Pre-Lab]] | ||
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| | | | ||
| | | | ||
| Tue/Wed Apr 29 | | Tue/Wed Apr 28/29 | ||
| | | | ||
| | | | ||
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| 3 | | 3 | ||
| 5 | | 5 | ||
| Thur/Fri May 1 | | Thur/Fri Apr/May 30/1 | ||
| [[User:AgiStachowiak | ANS]] | | [[User:AgiStachowiak | ANS]] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Initiating transcript and protein assays (Day5)| Initiating transcript and protein assays]] | | [[20.109(S14):Initiating transcript and protein assays (Day5)| Initiating transcript and protein assays]] | ||
| [[Media: 20109_S14-M3Lec5_AStachowiak.pdf | Lecture]]<br>[[Media:M3D5_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M3D5-ANS.pdf | W/F Pre-Lab]] | | [[Media: 20109_S14-M3Lec5_AStachowiak.pdf | Lecture]]<br>[[Media:M3D5_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M3D5-ANS.pdf | W/F Pre-Lab]] | ||
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| 3 | | 3 | ||
| 6 | | 6 | ||
| Tue/Wed May 6 | | Tue/Wed May 5/6 | ||
| [[User:AgiStachowiak | ANS]] | | [[User:AgiStachowiak | ANS]] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Transcript-level analysis (Day6)| Transcript-level analysis]] | | [[20.109(S14):Transcript-level analysis (Day6)| Transcript-level analysis]] | ||
| <font color=green>lab quiz</font color><br>[[Media: 20109_S14-M3Lec6_AStachowiak.pdf | Lecture]]<br>[[Media:S14_M3D6-ANS-TR.pdf|T/R Pre-Lab]]<br>[[Media:S14_M3D6-ANS.pdf | W/F Pre-Lab]] | | <font color=green>lab quiz</font color><br>[[Media: 20109_S14-M3Lec6_AStachowiak.pdf | Lecture]]<br>[[Media:S14_M3D6-ANS-TR.pdf|T/R Pre-Lab]]<br>[[Media:S14_M3D6-ANS.pdf | W/F Pre-Lab]] | ||
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| 3 | | 3 | ||
| 7 | | 7 | ||
| Thur/Fri May 8 | | Thur/Fri May 7/8 | ||
| [[User:AgiStachowiak | ANS]] | | [[User:AgiStachowiak | ANS]] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Protein-level and wrap-up analysis (Day7)| Protein-level and wrap-up analysis]] | | [[20.109(S14):Protein-level and wrap-up analysis (Day7)| Protein-level and wrap-up analysis]] | ||
| <br><font color = CC0000><b>Mod 3 Mini-report Due</b></font color><br>[[Media:M3D7_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M3D7-ANS.pdf | W/F Pre-Lab]] | | <br><font color = CC0000><b>Mod 3 Mini-report Due</b></font color><br>[[Media:M3D7_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M3D7-ANS.pdf | W/F Pre-Lab]] | ||
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| Tue/Wed May 13 | | Tue/Wed May 12/13 | ||
| [[User:AgiStachowiak | ANS]] | | [[User:AgiStachowiak | ANS]] | ||
| [[User: | | [[User:| ]] | ||
| [[20.109(S14):Student presentations (Day8)| Student presentations]] | | [[20.109(S14):Student presentations (Day8)| Student presentations]] | ||
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| Thur May | | Thur May 14 | ||
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Revision as of 15:34, 7 November 2014
MODULE | DAY | DATE | LECTURER | TA | LAB | NOTES | |
Tue/Wed Feb 3/4 | SKH | [[User:| ]] | Orientation | Introductory Lecture (PDF) T/R Pre-Lab W/F Pre-Lab | |||
1 | 1 | Thur/Fri Feb 5/6 | JR | [[User:| ]] | Microbial DNA extraction | lab orientation quiz Lecture L1 Notes T/R Pre-Lab W/F Pre-Lab | |
1 | 2 | Tue/Wed Feb 10/11 | JR | [[User:| ]] | Diagnostic primer design | Lecture L2 Notes T/R Pre-lab W/F Pre-Lab | |
1 | 3 | Thur/Fri Feb 12/13 | JR | [[User:| ]] | 16S PCR and paper discussion | lab quiz Lecture L3 Notes T/R Pre-lab W/F Pre-Lab WAC lecture, talks | |
President's Day Feb 16 | No lab Feb 17 or Feb 18 | ||||||
---|---|---|---|---|---|---|---|
1 | 4 | Thur/Fri Feb 19/20 | JR | [[User:| ]] | DNA cloning | L4 Notes T/R Pre-lab W/F Pre-Lab WAC lecture, figures | |
1 | 5 | Tue/Wed Feb 24/25 | JR | [[User:| ]] | DNA sequencing | lab quiz Lecture L5 notes T/R Pre-lab W/F Pre-lab | |
1 | 6 | Thur/Fri Feb 26/27 | JR | [[User:| ]] | Journal club I | Lecture L6 notes | |
1 | 7 | Tue/Wed Mar 3/4 | JR | [[User:| ]] | Phylogenetic and primer analyses | Lecture T/R Pre-lab W/F Pre-Lab | |
1 | 8 | Thur/Fri Mar 5/6 | JR | [[User:| ]] | Journal club II | lab quiz Lecture L7/8 notes WAC lecture, abstracts | |
2 | 1 | Tue/Wed Mar 10/11 | LS | [[User:| ]] | Introduction to cell strains and plating | Lecture T/R Prelab W/F Pre-Lab WAC lecture, IMRD Draft Mod 1 Abstract and Summary Due WED 1 PM | |
2 | 2 | Thur/Fri Mar 12/13 | LS | [[User:| ]] | Begin Western protein analysis | Lecture T/R Prelab W/F Pre-Lab | |
2 | 3 | Tue/Wed Mar 17/18 | LS | [[User:| ]] | Choose system conditions and paper discussion | Mod 1 Memo Due lab quiz Lecture T/R Pre-Lab W/F Pre-Lab | |
2 | 4 | Thur/Fri Mar 19/20 | LS | [[User:| ]] | Complete Western and prepare damaged DNA | Lecture T/R Pre-lab W/F Pre-Lab | |
Spring Break Mar 23-27 | No lab all week | ||||||
2 | 5 | Tue/Wed Mar/Apr 31/1 | LS | [[User:| ]] | Cell preparation for DNA repair assays | lab quiz Lecture T/R Pre-Lab W/F Pre-Lab | |
2 | 6 | Thur/Fri Apr 2/3 | LS | [[User:| ]] | DNA repair assays | Lecture T/R Pre-Lab W/F Pre-Lab Final Mod 1 Abstract and Summary Due | |
2 | 7 | Tue/Wed Apr 7/8 | LS | [[User:| ]] | Data analysis | lab quiz Lecture T/R Pre-Lab W/F Pre-Lab | |
3 | 1 | Thur/Fri Apr 9/10 | ANS | [[User:| ]] | Design experiment | Lecture T/R Pre-Lab W/F Pre-Lab | |
3 | 2 | Tue/Wed Apr 14/15 | ANS | [[User:| ]] | Initiate cell culture | lab quiz Lecture | |
3 | 3 | Thur/Fri Apr 16/17 | ANS | [[User:| ]] | Testing cell viability | Lecture | |
Patriot's Day April 20-21 | No lab Apr 21 or Apr 22 Mod 2 Report Due |
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3 | 4 | Thu/Fri Apr 23/24 | ANS | [[User:| ]] | Preparing cells for analysis | lab quiz Lecture T/R Pre-Lab W/F Pre-Lab | |
Tue/Wed Apr 28/29 | No lecture or lab today. | ||||||
3 | 5 | Thur/Fri Apr/May 30/1 | ANS | [[User:| ]] | Initiating transcript and protein assays | Lecture T/R Pre-Lab W/F Pre-Lab | |
3 | 6 | Tue/Wed May 5/6 | ANS | [[User:| ]] | Transcript-level analysis | lab quiz Lecture T/R Pre-Lab W/F Pre-Lab | |
3 | 7 | Thur/Fri May 7/8 | ANS | [[User:| ]] | Protein-level and wrap-up analysis | Mod 3 Mini-report Due T/R Pre-Lab W/F Pre-Lab | |
3 | 8 | Tue/Wed May 12/13 | ANS | [[User:| ]] | Student presentations | ||
Thur May 14 | No lab session. Meet in 16-220 from 11am-1pm: feedback/discussion about class, then celebratory lunch etc. |