20.109(F12): Journal Club II - Revision history

Nkuldell: /* Logistics of Paper Selection */

Nkuldell — Fri, 19 Oct 2012 21:56:04 GMT

Logistics of Paper Selection

←Older revision		Revision as of 21:56, 19 October 2012
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	As you prepare your talk be sure to follow the [[20.109(F12):Guidelines for oral presentations\| specific guidelines for oral presentations]] in this class.		As you prepare your talk be sure to follow the [[20.109(F12):Guidelines for oral presentations\| specific guidelines for oral presentations]] in this class.

-	*Please email your finished journal club presentation to [http://stellar.mit.edu/S/course/20/fa12/20.109/index.html the Stellar site] associated with our subject no later than ~~11 AM~~ on the day of your presentation. The order in which your presentations are uploaded to Stellar will determine the order of speakers.	+	*Please email your finished journal club presentation to [http://stellar.mit.edu/S/course/20/fa12/20.109/index.html the Stellar site] associated with our subject no later than 1 PM on the day of your presentation. The order in which your presentations are uploaded to Stellar will determine the order of speakers.

	*Presentations will take place in room 16-336.		*Presentations will take place in room 16-336.

Esha Atolia: /* Programming Cells */

Esha Atolia — Fri, 19 Oct 2012 07:00:35 GMT

Programming Cells

←Older revision		Revision as of 07:00, 19 October 2012
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	#''A synthetic three-color scaffold for monitoring genetic regulation and noise.'' Cox RS 3rd, Dunlop MJ, Elowitz MB. '''J Biol Eng.''' 2010 Jul 21;4:10.[[PMID: 20646328]]		#''A synthetic three-color scaffold for monitoring genetic regulation and noise.'' Cox RS 3rd, Dunlop MJ, Elowitz MB. '''J Biol Eng.''' 2010 Jul 21;4:10.[[PMID: 20646328]]
	#''Engineering a Direct and Inducible Protein−RNA Interaction To Regulate RNA Biology''Belmont, B., Niles, J.'''ACS Chem. Biol.,''' 2010; 5 (9): 851–861 [[DOI: 10.1021/cb100070j]]		#''Engineering a Direct and Inducible Protein−RNA Interaction To Regulate RNA Biology''Belmont, B., Niles, J.'''ACS Chem. Biol.,''' 2010; 5 (9): 851–861 [[DOI: 10.1021/cb100070j]]
		+	---------
		+	#<font color="purple"><b>"Construction of a genetic toggle switch" Gardner, T. S., C. R. Cantor, and J. J. Collins, 2000, Nature (London) 403, 520. [EA/WF/Purple]</b></font color>

Muhammad Saad Shoukat: /* Programming Cells */

Muhammad Saad Shoukat — Thu, 18 Oct 2012 09:48:30 GMT

Programming Cells

←Older revision		Revision as of 09:48, 18 October 2012
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	#''Standard biological parts knowledgebase''Galdzicki M, Rodriguez C, Chandran D, Sauro HM, Gennari JH. '''PLoS One''' 2011 Feb 24;6(2):e17005 [[PMID: 21390321]]		#''Standard biological parts knowledgebase''Galdzicki M, Rodriguez C, Chandran D, Sauro HM, Gennari JH. '''PLoS One''' 2011 Feb 24;6(2):e17005 [[PMID: 21390321]]
	#''Construction of a Genetic Multiplexer to Toggle between Chemosensory Pathways in Escherichia coli'' Moon, et. al. '''Journal of Molecular Biology''' (2011) 406(2): 215-227 [[doi:10.1016/j.jmb.2010.12.019]]		#''Construction of a Genetic Multiplexer to Toggle between Chemosensory Pathways in Escherichia coli'' Moon, et. al. '''Journal of Molecular Biology''' (2011) 406(2): 215-227 [[doi:10.1016/j.jmb.2010.12.019]]
-	#''Design and construction of "synthetic species"'' Moreno E. '''PLoS One'''2012;7(7):e39054.[[PMID: 22848349] <font color = purple><b>[MSS/TR/Purple]</b></font color>]	+	#''Design and construction of "synthetic species"'' Moreno E. '''PLoS One'''2012;7(7):e39054.[[PMID: 22848349]]<font color = purple><b>[MSS/TR/Purple]</b></font color>
	# ''Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology'' Baojun Wang, Richard I Kitney, Nicolas Joly, Martin Buck. '''Nat. Commun.'''(2011) 2 : 508 [[doi: 10.1038/ncomms1516]]		# ''Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology'' Baojun Wang, Richard I Kitney, Nicolas Joly, Martin Buck. '''Nat. Commun.'''(2011) 2 : 508 [[doi: 10.1038/ncomms1516]]
	#''Expanding the Genetic Code of an Animal''S Greiss, and J Chin. '''J. Am. Chem. Soc.'''(2011) 133(36):14196-9.[[DOI: 10.1021/ja2054034]]		#''Expanding the Genetic Code of an Animal''S Greiss, and J Chin. '''J. Am. Chem. Soc.'''(2011) 133(36):14196-9.[[DOI: 10.1021/ja2054034]]

Esha Atolia: /* Programming Cells */

Esha Atolia — Wed, 17 Oct 2012 06:07:20 GMT

Programming Cells

←Older revision		Revision as of 06:07, 17 October 2012
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	#''Programming cells by multiplex genome engineering and accelerated evolution.'' Wang HH, Isaacs FJ, Carr PA, Sun ZZ, Xu G, Forest CR, Church GM. '''Nature.''' 2009 Jul 26. [[PMID: 19633652]]		#''Programming cells by multiplex genome engineering and accelerated evolution.'' Wang HH, Isaacs FJ, Carr PA, Sun ZZ, Xu G, Forest CR, Church GM. '''Nature.''' 2009 Jul 26. [[PMID: 19633652]]
	#''A synthetic genetic edge detection program.'' Tabor JJ, Salis HM, Simpson ZB, Chevalier AA, Levskaya A, Marcotte EM, Voigt CA, Ellington AD. '''Cell.''' 2009 Jun 26;137(7):1272-81. [[PMID: 19563759]]		#''A synthetic genetic edge detection program.'' Tabor JJ, Salis HM, Simpson ZB, Chevalier AA, Levskaya A, Marcotte EM, Voigt CA, Ellington AD. '''Cell.''' 2009 Jun 26;137(7):1272-81. [[PMID: 19563759]]
-	#''Synthetic gene networks that count.'' Friedland AE, Lu TK, Wang X, Shi D, Church G, Collins JJ. '''Science.''' 2009 May 29;324(5931):1199-202. [[PMID: 19478183]] ~~<font color = purple><b>[EA/WF/Purple]</b></font color>~~	+	#''Synthetic gene networks that count.'' Friedland AE, Lu TK, Wang X, Shi D, Church G, Collins JJ. '''Science.''' 2009 May 29;324(5931):1199-202. [[PMID: 19478183]]
	#''A modular and extensible RNA-based gene-regulatory platform for engineering cellular function.'' Win MN, Smolke CD. '''Proc Natl Acad Sci U S A.''' 2007 Sep 4;104(36):14283-8. [[PMID: 17709748]]		#''A modular and extensible RNA-based gene-regulatory platform for engineering cellular function.'' Win MN, Smolke CD. '''Proc Natl Acad Sci U S A.''' 2007 Sep 4;104(36):14283-8. [[PMID: 17709748]]
	#''Using two-component systems and other bacterial regulatory factors for the fabrication of synthetic genetic devices.'' Ninfa AJ, Selinsky S, Perry N, Atkins S, Xiu Song Q, Mayo A, Arps D, Woolf P, Atkinson MR. '''Methods Enzymol.''' 2007;422:488-512. [[PMID: 17628156]]		#''Using two-component systems and other bacterial regulatory factors for the fabrication of synthetic genetic devices.'' Ninfa AJ, Selinsky S, Perry N, Atkins S, Xiu Song Q, Mayo A, Arps D, Woolf P, Atkinson MR. '''Methods Enzymol.''' 2007;422:488-512. [[PMID: 17628156]]

Angela Zhu at 04:15, 17 October 2012

Angela Zhu — Wed, 17 Oct 2012 04:15:05 GMT

←Older revision		Revision as of 04:15, 17 October 2012
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	#''A modular cloning system for standardized assembly of multigene constructs'' Weber E, Engler C, Gruetzner R, Werner S, Marillonnet S. '''PLoS One''' 2011 Feb 18;6(2):e16765.[[PMID: 21364738]]		#''A modular cloning system for standardized assembly of multigene constructs'' Weber E, Engler C, Gruetzner R, Werner S, Marillonnet S. '''PLoS One''' 2011 Feb 18;6(2):e16765.[[PMID: 21364738]]
	#''PGASO: A synthetic biology tool for engineering a cellulolytic yeast''Chang JJ, Ho CY, Ho FJ, Tsai TY, Ke HM, Wang CH, Chen HL, Shih MC, Huang CC, Li WH.'''Biotechnol Biofuels.''' 2012 Jul 27;5(1):53.[[PMID: 22839502]]		#''PGASO: A synthetic biology tool for engineering a cellulolytic yeast''Chang JJ, Ho CY, Ho FJ, Tsai TY, Ke HM, Wang CH, Chen HL, Shih MC, Huang CC, Li WH.'''Biotechnol Biofuels.''' 2012 Jul 27;5(1):53.[[PMID: 22839502]]
-	#''The bacterial nanorecorder: engineering E. coli to function as a chemical recording device'' Bhomkar P, Materi W, Wishart DS. '''PLoS One''' 2011;6(11):e27559. [[PMID: 22132112]]~~<font color=red><b>[AZ/TR/Red]</b></font color>~~	+	#''The bacterial nanorecorder: engineering E. coli to function as a chemical recording device'' Bhomkar P, Materi W, Wishart DS. '''PLoS One''' 2011;6(11):e27559. [[PMID: 22132112]]
	#''Standard biological parts knowledgebase''Galdzicki M, Rodriguez C, Chandran D, Sauro HM, Gennari JH. '''PLoS One''' 2011 Feb 24;6(2):e17005 [[PMID: 21390321]]		#''Standard biological parts knowledgebase''Galdzicki M, Rodriguez C, Chandran D, Sauro HM, Gennari JH. '''PLoS One''' 2011 Feb 24;6(2):e17005 [[PMID: 21390321]]
	#''Construction of a Genetic Multiplexer to Toggle between Chemosensory Pathways in Escherichia coli'' Moon, et. al. '''Journal of Molecular Biology''' (2011) 406(2): 215-227 [[doi:10.1016/j.jmb.2010.12.019]]		#''Construction of a Genetic Multiplexer to Toggle between Chemosensory Pathways in Escherichia coli'' Moon, et. al. '''Journal of Molecular Biology''' (2011) 406(2): 215-227 [[doi:10.1016/j.jmb.2010.12.019]]
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	#''Programmable Ligand Detection System in Plants through a Synthetic Signal Transduction Pathway''Antunes MS, Morey KJ, Smith JJ, Albrecht KD, Bowen TA, et al.'''PLoS ONE''' 6(1): e16292. [[doi:10.1371/journal.pone.0016292]]		#''Programmable Ligand Detection System in Plants through a Synthetic Signal Transduction Pathway''Antunes MS, Morey KJ, Smith JJ, Albrecht KD, Bowen TA, et al.'''PLoS ONE''' 6(1): e16292. [[doi:10.1371/journal.pone.0016292]]
	#''Precise Manipulation of Chromosomes in Vivo Enables Genome-Wide Codon Replacement'' Isaacs et al. '''Science''' (2011) 333(348)[[DOI: 10.1126/science.1205822]]		#''Precise Manipulation of Chromosomes in Vivo Enables Genome-Wide Codon Replacement'' Isaacs et al. '''Science''' (2011) 333(348)[[DOI: 10.1126/science.1205822]]
-	#''Towards a Synthetic Chloroplast'' Agapakis CM, Niederholtmeyer H, Noche RR, Lieberman TD, Megason SG, et al. '''PLoS ONE''' (2011) 6(4): e18877. [[doi:10.1371/journal.pone.0018877]]	+	#''Towards a Synthetic Chloroplast'' Agapakis CM, Niederholtmeyer H, Noche RR, Lieberman TD, Megason SG, et al. '''PLoS ONE''' (2011) 6(4): e18877. [[doi:10.1371/journal.pone.0018877]]<font color=red><b>[AZ/TR/Red]</b></font color>
	#''A synthetic mammalian gene circuit reveals antituberculosis compounds.'' Weber W, Schoenmakers R, Keller B, Gitzinger M, Grau T, Daoud-El Baba M, Sander P, Fussenegger M. '''Proc Natl Acad Sci U S A.''' 2008 Jul 22;105(29):9994-8. [[PMID: 18621677]]		#''A synthetic mammalian gene circuit reveals antituberculosis compounds.'' Weber W, Schoenmakers R, Keller B, Gitzinger M, Grau T, Daoud-El Baba M, Sander P, Fussenegger M. '''Proc Natl Acad Sci U S A.''' 2008 Jul 22;105(29):9994-8. [[PMID: 18621677]]
	# ''Synchronizing genetic relaxation oscillators by intercell signaling.'' McMillen D, Kopell N, Hasty J, Collins JJ. '''Proc Natl Acad Sci U S A.''' 2002 Jan 22;99(2):679-84. [[PMID: 11805323]]		# ''Synchronizing genetic relaxation oscillators by intercell signaling.'' McMillen D, Kopell N, Hasty J, Collins JJ. '''Proc Natl Acad Sci U S A.''' 2002 Jan 22;99(2):679-84. [[PMID: 11805323]]

Samantha Alvarez at 21:35, 14 October 2012

Samantha Alvarez — Sun, 14 Oct 2012 21:35:08 GMT

←Older revision		Revision as of 21:35, 14 October 2012
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	#''Single-molecule sequencing of an individual human genome.'' Pushkarev, D., Neff, N. F. & Quake, S. R. '''Nature Biotech.''' 10 Aug 2009 [[doi: 10.1038/nbt.1561]]		#''Single-molecule sequencing of an individual human genome.'' Pushkarev, D., Neff, N. F. & Quake, S. R. '''Nature Biotech.''' 10 Aug 2009 [[doi: 10.1038/nbt.1561]]
	#''A switchable light-input, light-output system modelled and constructed in yeast.'' Sorokina, O et al., '''Journal of Biological Engineering''' 2009, 3:15 [[doi:10.1186/1754-1611-3-15]]		#''A switchable light-input, light-output system modelled and constructed in yeast.'' Sorokina, O et al., '''Journal of Biological Engineering''' 2009, 3:15 [[doi:10.1186/1754-1611-3-15]]
-	# ''Induction of protein-protein interactions in live cells using light'' Masayuki Yazawa, Amir M Sadaghiani, Brian Hsueh and Ricardo E Dolmetsch '''Nature Biotechnology.''' 2009 Oct;27(1):941-945 [[doi:10.1038/nbt.1569 ]]	+	# ''Induction of protein-protein interactions in live cells using light'' Masayuki Yazawa, Amir M Sadaghiani, Brian Hsueh and Ricardo E Dolmetsch '''Nature Biotechnology.''' 2009 Oct;27(1):941-945 [[doi:10.1038/nbt.1569 ]] <font color = pink><b>[SA/TR/Pink]</b></font color>
	# ''Automated design of synthetic ribosome binding sites to control protein expression'' Howard M Salis, Ethan A Mirsky and Christopher A Voigt '''Nature Biotechnology''' 2009 Oct;27(1):946 - 950 [[doi:10.1038/nbt.1568]]		# ''Automated design of synthetic ribosome binding sites to control protein expression'' Howard M Salis, Ethan A Mirsky and Christopher A Voigt '''Nature Biotechnology''' 2009 Oct;27(1):946 - 950 [[doi:10.1038/nbt.1568]]
	#''Tracking, tuning, and terminating microbial physiology using synthetic riboregulators.'' Callura JM, Dwyer DJ, Isaacs FJ, Cantor CR, Collins JJ. '''Proc Natl Acad Sci U S A.''' 2010 Aug 16. [[PMID: 20713708]]		#''Tracking, tuning, and terminating microbial physiology using synthetic riboregulators.'' Callura JM, Dwyer DJ, Isaacs FJ, Cantor CR, Collins JJ. '''Proc Natl Acad Sci U S A.''' 2010 Aug 16. [[PMID: 20713708]]
	#''A synthetic three-color scaffold for monitoring genetic regulation and noise.'' Cox RS 3rd, Dunlop MJ, Elowitz MB. '''J Biol Eng.''' 2010 Jul 21;4:10.[[PMID: 20646328]]		#''A synthetic three-color scaffold for monitoring genetic regulation and noise.'' Cox RS 3rd, Dunlop MJ, Elowitz MB. '''J Biol Eng.''' 2010 Jul 21;4:10.[[PMID: 20646328]]
	#''Engineering a Direct and Inducible Protein−RNA Interaction To Regulate RNA Biology''Belmont, B., Niles, J.'''ACS Chem. Biol.,''' 2010; 5 (9): 851–861 [[DOI: 10.1021/cb100070j]]		#''Engineering a Direct and Inducible Protein−RNA Interaction To Regulate RNA Biology''Belmont, B., Niles, J.'''ACS Chem. Biol.,''' 2010; 5 (9): 851–861 [[DOI: 10.1021/cb100070j]]

Clara Park: /* Programming Cells */

Clara Park — Sun, 14 Oct 2012 20:45:01 GMT

Programming Cells

←Older revision		Revision as of 20:45, 14 October 2012
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	#''Rewritable digital data storage in live cells via engineered control of recombination directionality''Bonnet J, Subsoontorn P, Endy D. '''PNAS''' 2012 Jun 5;109(23):8884-9. [[PMID: 22615351]]<font color=yellow><b>[SG/TR/Yellow]</b></font color>		#''Rewritable digital data storage in live cells via engineered control of recombination directionality''Bonnet J, Subsoontorn P, Endy D. '''PNAS''' 2012 Jun 5;109(23):8884-9. [[PMID: 22615351]]<font color=yellow><b>[SG/TR/Yellow]</b></font color>
	#<font color=purple><b>[RS/TR/Orange]</b></font color>''Towards a synthetic chloroplast'' Agapakis CM, Niederholtmeyer H, Noche RR, Lieberman TD, Megason SG, Way JC, Silver PA. '''PLoS One'''2011 Apr 20;6(4):e18877. [[PMID: 21533097]]		#<font color=purple><b>[RS/TR/Orange]</b></font color>''Towards a synthetic chloroplast'' Agapakis CM, Niederholtmeyer H, Noche RR, Lieberman TD, Megason SG, Way JC, Silver PA. '''PLoS One'''2011 Apr 20;6(4):e18877. [[PMID: 21533097]]
-	#''A synthetic biology framework for programming eukaryotic transcription functions'' Khalil AS, Lu TK, Bashor CJ, Ramirez CL, Pyenson NC, Joung JK, Collins JJ. '''Cell''' 2012 Aug 3;150(3):647-58. [[PMID: 22863014]]	+	#<font color=pink><b>[CP/WF/Pink]</b></font color>''A synthetic biology framework for programming eukaryotic transcription functions'' Khalil AS, Lu TK, Bashor CJ, Ramirez CL, Pyenson NC, Joung JK, Collins JJ. '''Cell''' 2012 Aug 3;150(3):647-58. [[PMID: 22863014]]
	#''Modular Design of Artificial Tissue Homeostasis: Robust Control through Synthetic Cellular Heterogeneity''Miller M, Hafner M, Sontag E, Davidsohn N, Subramanian S, Purnick PE, Lauffenburger D, Weiss R. '''PLoS Comput Biol.''' 2012 Jul;8(7):e1002579.[[PMID: 22829755]]		#''Modular Design of Artificial Tissue Homeostasis: Robust Control through Synthetic Cellular Heterogeneity''Miller M, Hafner M, Sontag E, Davidsohn N, Subramanian S, Purnick PE, Lauffenburger D, Weiss R. '''PLoS Comput Biol.''' 2012 Jul;8(7):e1002579.[[PMID: 22829755]]
	#''A modular cloning system for standardized assembly of multigene constructs'' Weber E, Engler C, Gruetzner R, Werner S, Marillonnet S. '''PLoS One''' 2011 Feb 18;6(2):e16765.[[PMID: 21364738]]		#''A modular cloning system for standardized assembly of multigene constructs'' Weber E, Engler C, Gruetzner R, Werner S, Marillonnet S. '''PLoS One''' 2011 Feb 18;6(2):e16765.[[PMID: 21364738]]
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	# ''Synchronizing genetic relaxation oscillators by intercell signaling.'' McMillen D, Kopell N, Hasty J, Collins JJ. '''Proc Natl Acad Sci U S A.''' 2002 Jan 22;99(2):679-84. [[PMID: 11805323]]		# ''Synchronizing genetic relaxation oscillators by intercell signaling.'' McMillen D, Kopell N, Hasty J, Collins JJ. '''Proc Natl Acad Sci U S A.''' 2002 Jan 22;99(2):679-84. [[PMID: 11805323]]
	#''Programming cells by multiplex genome engineering and accelerated evolution.'' Wang HH, Isaacs FJ, Carr PA, Sun ZZ, Xu G, Forest CR, Church GM. '''Nature.''' 2009 Jul 26. [[PMID: 19633652]]		#''Programming cells by multiplex genome engineering and accelerated evolution.'' Wang HH, Isaacs FJ, Carr PA, Sun ZZ, Xu G, Forest CR, Church GM. '''Nature.''' 2009 Jul 26. [[PMID: 19633652]]
-	~~#<font color="purple"><b>[CP/WF/Pink]</b></font color>~~
	#''A synthetic genetic edge detection program.'' Tabor JJ, Salis HM, Simpson ZB, Chevalier AA, Levskaya A, Marcotte EM, Voigt CA, Ellington AD. '''Cell.''' 2009 Jun 26;137(7):1272-81. [[PMID: 19563759]]		#''A synthetic genetic edge detection program.'' Tabor JJ, Salis HM, Simpson ZB, Chevalier AA, Levskaya A, Marcotte EM, Voigt CA, Ellington AD. '''Cell.''' 2009 Jun 26;137(7):1272-81. [[PMID: 19563759]]
	#''Synthetic gene networks that count.'' Friedland AE, Lu TK, Wang X, Shi D, Church G, Collins JJ. '''Science.''' 2009 May 29;324(5931):1199-202. [[PMID: 19478183]] <font color = purple><b>[EA/WF/Purple]</b></font color>		#''Synthetic gene networks that count.'' Friedland AE, Lu TK, Wang X, Shi D, Church G, Collins JJ. '''Science.''' 2009 May 29;324(5931):1199-202. [[PMID: 19478183]] <font color = purple><b>[EA/WF/Purple]</b></font color>

Esha Atolia: /* Programming Cells */

Esha Atolia — Sun, 14 Oct 2012 15:41:53 GMT

Programming Cells

←Older revision		Revision as of 15:41, 14 October 2012
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	#<font color="purple"><b>[CP/WF/Pink]</b></font color>		#<font color="purple"><b>[CP/WF/Pink]</b></font color>
	#''A synthetic genetic edge detection program.'' Tabor JJ, Salis HM, Simpson ZB, Chevalier AA, Levskaya A, Marcotte EM, Voigt CA, Ellington AD. '''Cell.''' 2009 Jun 26;137(7):1272-81. [[PMID: 19563759]]		#''A synthetic genetic edge detection program.'' Tabor JJ, Salis HM, Simpson ZB, Chevalier AA, Levskaya A, Marcotte EM, Voigt CA, Ellington AD. '''Cell.''' 2009 Jun 26;137(7):1272-81. [[PMID: 19563759]]
-	#''Synthetic gene networks that count.'' Friedland AE, Lu TK, Wang X, Shi D, Church G, Collins JJ. '''Science.''' 2009 May 29;324(5931):1199-202. [[PMID: 19478183]] <font color = purple><b>[EA/WF/Purple]</b></font color>]	+	#''Synthetic gene networks that count.'' Friedland AE, Lu TK, Wang X, Shi D, Church G, Collins JJ. '''Science.''' 2009 May 29;324(5931):1199-202. [[PMID: 19478183]] <font color = purple><b>[EA/WF/Purple]</b></font color>
	#''A modular and extensible RNA-based gene-regulatory platform for engineering cellular function.'' Win MN, Smolke CD. '''Proc Natl Acad Sci U S A.''' 2007 Sep 4;104(36):14283-8. [[PMID: 17709748]]		#''A modular and extensible RNA-based gene-regulatory platform for engineering cellular function.'' Win MN, Smolke CD. '''Proc Natl Acad Sci U S A.''' 2007 Sep 4;104(36):14283-8. [[PMID: 17709748]]
	#''Using two-component systems and other bacterial regulatory factors for the fabrication of synthetic genetic devices.'' Ninfa AJ, Selinsky S, Perry N, Atkins S, Xiu Song Q, Mayo A, Arps D, Woolf P, Atkinson MR. '''Methods Enzymol.''' 2007;422:488-512. [[PMID: 17628156]]		#''Using two-component systems and other bacterial regulatory factors for the fabrication of synthetic genetic devices.'' Ninfa AJ, Selinsky S, Perry N, Atkins S, Xiu Song Q, Mayo A, Arps D, Woolf P, Atkinson MR. '''Methods Enzymol.''' 2007;422:488-512. [[PMID: 17628156]]

Esha Atolia: /* Programming Cells */

Esha Atolia — Sun, 14 Oct 2012 15:41:12 GMT

Programming Cells

←Older revision		Revision as of 15:41, 14 October 2012
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	#<font color="purple"><b>[CP/WF/Pink]</b></font color>		#<font color="purple"><b>[CP/WF/Pink]</b></font color>
	#''A synthetic genetic edge detection program.'' Tabor JJ, Salis HM, Simpson ZB, Chevalier AA, Levskaya A, Marcotte EM, Voigt CA, Ellington AD. '''Cell.''' 2009 Jun 26;137(7):1272-81. [[PMID: 19563759]]		#''A synthetic genetic edge detection program.'' Tabor JJ, Salis HM, Simpson ZB, Chevalier AA, Levskaya A, Marcotte EM, Voigt CA, Ellington AD. '''Cell.''' 2009 Jun 26;137(7):1272-81. [[PMID: 19563759]]
-	#''Synthetic gene networks that count.'' Friedland AE, Lu TK, Wang X, Shi D, Church G, Collins JJ. '''Science.''' 2009 May 29;324(5931):1199-202. [[PMID: 19478183]]	+	#''Synthetic gene networks that count.'' Friedland AE, Lu TK, Wang X, Shi D, Church G, Collins JJ. '''Science.''' 2009 May 29;324(5931):1199-202. [[PMID: 19478183]] <font color = purple><b>[EA/WF/Purple]</b></font color>]
	#''A modular and extensible RNA-based gene-regulatory platform for engineering cellular function.'' Win MN, Smolke CD. '''Proc Natl Acad Sci U S A.''' 2007 Sep 4;104(36):14283-8. [[PMID: 17709748]]		#''A modular and extensible RNA-based gene-regulatory platform for engineering cellular function.'' Win MN, Smolke CD. '''Proc Natl Acad Sci U S A.''' 2007 Sep 4;104(36):14283-8. [[PMID: 17709748]]
	#''Using two-component systems and other bacterial regulatory factors for the fabrication of synthetic genetic devices.'' Ninfa AJ, Selinsky S, Perry N, Atkins S, Xiu Song Q, Mayo A, Arps D, Woolf P, Atkinson MR. '''Methods Enzymol.''' 2007;422:488-512. [[PMID: 17628156]]		#''Using two-component systems and other bacterial regulatory factors for the fabrication of synthetic genetic devices.'' Ninfa AJ, Selinsky S, Perry N, Atkins S, Xiu Song Q, Mayo A, Arps D, Woolf P, Atkinson MR. '''Methods Enzymol.''' 2007;422:488-512. [[PMID: 17628156]]

Angela Zhu at 03:34, 14 October 2012

Angela Zhu — Sun, 14 Oct 2012 03:34:48 GMT

←Older revision		Revision as of 03:34, 14 October 2012
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	#''Modular Design of Artificial Tissue Homeostasis: Robust Control through Synthetic Cellular Heterogeneity''Miller M, Hafner M, Sontag E, Davidsohn N, Subramanian S, Purnick PE, Lauffenburger D, Weiss R. '''PLoS Comput Biol.''' 2012 Jul;8(7):e1002579.[[PMID: 22829755]]		#''Modular Design of Artificial Tissue Homeostasis: Robust Control through Synthetic Cellular Heterogeneity''Miller M, Hafner M, Sontag E, Davidsohn N, Subramanian S, Purnick PE, Lauffenburger D, Weiss R. '''PLoS Comput Biol.''' 2012 Jul;8(7):e1002579.[[PMID: 22829755]]
	#''A modular cloning system for standardized assembly of multigene constructs'' Weber E, Engler C, Gruetzner R, Werner S, Marillonnet S. '''PLoS One''' 2011 Feb 18;6(2):e16765.[[PMID: 21364738]]		#''A modular cloning system for standardized assembly of multigene constructs'' Weber E, Engler C, Gruetzner R, Werner S, Marillonnet S. '''PLoS One''' 2011 Feb 18;6(2):e16765.[[PMID: 21364738]]
-	#''PGASO: A synthetic biology tool for engineering a cellulolytic yeast''Chang JJ, Ho CY, Ho FJ, Tsai TY, Ke HM, Wang CH, Chen HL, Shih MC, Huang CC, Li WH.'''Biotechnol Biofuels.''' 2012 Jul 27;5(1):53.[[PMID: 22839502]]~~<font color=red><b>[AZ/TR/Red]</b></font color>~~	+	#''PGASO: A synthetic biology tool for engineering a cellulolytic yeast''Chang JJ, Ho CY, Ho FJ, Tsai TY, Ke HM, Wang CH, Chen HL, Shih MC, Huang CC, Li WH.'''Biotechnol Biofuels.''' 2012 Jul 27;5(1):53.[[PMID: 22839502]]
-	#''The bacterial nanorecorder: engineering E. coli to function as a chemical recording device'' Bhomkar P, Materi W, Wishart DS. '''PLoS One''' 2011;6(11):e27559. [[PMID: 22132112]]	+	#''The bacterial nanorecorder: engineering E. coli to function as a chemical recording device'' Bhomkar P, Materi W, Wishart DS. '''PLoS One''' 2011;6(11):e27559. [[PMID: 22132112]]<font color=red><b>[AZ/TR/Red]</b></font color>
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