20.109: Spring 2007 schedule

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| [[Andrea Tentner | AT]]
| [[Andrea Tentner | AT]]
| [[20.109(S07): Screen for phenotypes, isolate RNA| Screen for phenotypes, isolate RNA]]
| [[20.109(S07): Screen for phenotypes, isolate RNA| Screen for phenotypes, isolate RNA]]
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|  
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| [[Media:Macintosh HD-Users-nkuldell-Desktop-lectures-BE109 lectures (S07)-109(S07)lect3 handout.pdf | PDF]] of M3D4 lecture slides
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| [[Andrea Tentner | AT]]
| [[Andrea Tentner | AT]]
| [[20.109(S07): cDNA synthesis and microarray| cDNA synthesis and microarray]]
| [[20.109(S07): cDNA synthesis and microarray| cDNA synthesis and microarray]]
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| [[Media:109(S07)lect4 handout.pdf| PDF]] of M3D5 lecture slides
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| 3
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| [[Andrea Tentner | AT]]
| [[Andrea Tentner | AT]]
| [[20.109(S07): Microarray data analysis| Microarray data analysis]]
| [[20.109(S07): Microarray data analysis| Microarray data analysis]]
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| guest lecture: Rebecca Fry  
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| guest lecture: Rebecca Fry <br> and her slides are [[Media:Macintosh HD-Users-nkuldell-Desktop-dataanalysis20071.pdf| here]]
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| colspan="7" |
| colspan="7" |
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| AB
| AB
| [[Chandni Valiathan | CV]]
| [[Chandni Valiathan | CV]]
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| [[20.109(S07): Growth of phage materials| Growth of phage materials]] or [[BE.109:Bio-material engineering/Screening library | Screening library]]
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| [[20.109(S07):Bio-material engineering/Screening library | Screening library]]
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|  
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| AB
| AB
| [[Chandni Valiathan | CV]]
| [[Chandni Valiathan | CV]]
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| [[20.109(S07): Testing redesigned genomes| Testing redesigned genomes]] or [[BE.109:Bio-material engineering/Optimizing panning | Optimizing panning]]
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| [[20.109(S07): Bio-material engineering/Optimizing panning | Optimizing panning]]
| first draft of [[20.109(S07): Expression engineering report| your writing assignment]] due Monday April 30th by 9AM
| first draft of [[20.109(S07): Expression engineering report| your writing assignment]] due Monday April 30th by 9AM
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| AB
| AB
| [[Chandni Valiathan | CV]]
| [[Chandni Valiathan | CV]]
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| [[20.109(S07): Building phage nanowires| Building phage nanowires]] or [[BE.109:Bio-material engineering/Rescreening gold binders | Rescreening gold binders]]  
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| [[20.109(S07): Bio-material engineering/Rescreening gold binders | Rescreening gold binders]]  
|  
|  
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| AB
| AB
| [[Chandni Valiathan | CV]]
| [[Chandni Valiathan | CV]]
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| [[20.109 (S07): Transmission electron microscopy| TEM]] or [[BE.109:Bio-material engineering/PCR of gold binding candidates | PCR of gold binding candidates]]
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| [[20.109(S07): Bio-material engineering/PCR of gold binding candidates | PCR of gold binding candidates]]
| Mod 3 lab reports returned for revision
| Mod 3 lab reports returned for revision
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| AB
| AB
| [[Chandni Valiathan | CV]]
| [[Chandni Valiathan | CV]]
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| [[20.109 (S07): Atomic force microscopy| AFM]] or [[BE.109:Presenting your work | Student presentations]]
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| [[20.109 (S07): Research proposal, module 4| Student presentations]]
|  
|  
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| AB
| AB
| [[Chandni Valiathan | CV]]
| [[Chandni Valiathan | CV]]
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| [[20.109 (S07): Research proposal, module 4 | Student presentations]] or [[BE.109:Bio-material engineering/Sequence analysis | Analyze sequence data]]
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| [[20.109(S07): Bio-material engineering/Sequence analysis | Analyze sequence data]]
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| Revised Mod 3 writing assignment due before lab
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| Revised Mod 3 writing assignment due before lab<br> no lecture today
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Current revision

20.109: Laboratory Fundamentals of Biological Engineering

Home        People        Schedule Spring 2007        Lab Basics        OWW Basics       
Genome Engineering        Biophysical Signal Measurement        Expression Engineering        Biomaterial Engineering       

MODULE DAY DATE LECTURER TA LAB note
Tue Feb 6 NK Orientation
1 1 Thur Feb 8 DE SC Start-up genome engineering PDF of class discussion slides
1 2 Tue Feb 13 DE SC Agarose gel electrophoresis PDF of class notes
1 3 Thur Feb 15 DE SC DNA ligation and bacterial transformation
President's Day Feb 19 No lab Feb 20 or Feb 21
1 4 Thur Feb 22 DE SC Examine candidate clones guest lecture from Harlan Breindel
1 5 Tue Feb 27 DE SC Western analysis PDF of class discussion slides
1 6 Thur Mar 1 DE SC Probe western first draft of your writing assignment due before lab, PDF of class slides
2 1 Tue Mar 6 AJ YSN Start-up signal measurement
2 2 Thur Mar 8 AJ YSN Measuring calcium in vitro
2 3 Tue Mar 13 AJ YSN Lipofection
2 4 Thur Mar 15 AJ YSN Measuring calcium in vivo
2 5 Tue Mar 20 AJ YSN Calcium signaling in vivo
2 6 Thur Mar 22 AJ YSN Student presentations
Spring Break Mar 26-30 No lab all week
3 1 Tue Apr 3 NK AT Start-up expression engineering PDF of M3D1 lecture slides
3 2 Thur Apr 5 NK AT Yeast transformation PDF of M3D2 lecture slides
3 3 Tue Apr 10 NK AT Colony PCR guest lecture: Susan Ruff and her slides are here
3 4 Thur Apr 12 NK AT Screen for phenotypes, isolate RNA PDF of M3D4 lecture slides
Patriot's Day April 16-17 No lab Apr 17 or Apr 18
3 5 Thur Apr 19 NK AT cDNA synthesis and microarray PDF of M3D5 lecture slides
3 6 Tue Apr 24 NK AT Microarray data analysis guest lecture: Rebecca Fry
and her slides are here
4 1 Thur Apr 26 AB CV Screening library
4 2 Tue May 1 AB CV Optimizing panning first draft of your writing assignment due Monday April 30th by 9AM
4 3 Thur May 3 AB CV Rescreening gold binders
4 4 Tue May 8 AB CV PCR of gold binding candidates Mod 3 lab reports returned for revision
4 5 Thur May 10 AB CV Student presentations
4 6 Tue May 15 AB CV Analyze sequence data Revised Mod 3 writing assignment due before lab
no lecture today
Thur May 17 Lecture only, no lab
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