20.181:Assignments: Difference between revisions
From OpenWetWare
Jump to navigationJump to search
| Line 32: | Line 32: | ||
#*[[Media:Data6.txt | Example data]] | #*[[Media:Data6.txt | Example data]] | ||
#*[[Media:HW6syntaxHelper.pdf | HW6 Syntax Helper]] | #*[[Media:HW6syntaxHelper.pdf | HW6 Syntax Helper]] | ||
#[[Media:20.181.hw7.pdf | Assignment #7 PDF]] due before Oct. | #[[Media:20.181.hw7.pdf | Assignment #7 PDF]] due before Oct. 27 | ||
#*[[Media:Data7.txt | Example data]] | #*[[Media:Data7.txt | Example data]] | ||
#*[[Media:Vector.py | Pyhton module for vector math]] | |||
==Metabolic Networks== | ==Metabolic Networks== | ||
Revision as of 21:25, 18 October 2006
Phylogenetic Inference
- Assignment #1 PDF due before Sept. 14 (due on Wednesday before midnight)
- Assignment #2 PDF due before Sept. 19
- hw2.py: codebase for assignment #2 (run with "python hw2.py")
- Example tree
- a solution
- Assignment #3 PDF due before Sept. 21,
- Hw3.py: codebase for assignment #3 run with "python hw3.py",
- Example tree in Newick form
- pdf of example tree
- smaller test tree (with answers)
- a solution
- Assignment #4 PDF due before Sept. 28
- Assignment #5 PDF due before Oct. 10
- hw5.py codebase for hw5 updated! -Sonia 19:58, 5 October 2006 (EDT)
- Example tree
- Example sequence alignment
- jukes-cantor placeholding code
- a solution
- a derivation
Molecular Modeling
- Assignment #6 PDF due before Oct. 17
- Assignment #7 PDF due before Oct. 27
