20.309:Schedule
From OpenWetWare
m 

Line 61:  Line 61:  
Feedback: Black's formula, the loop;<br>  Feedback: Black's formula, the loop;<br>  
opamps: "golden rules" and circuit examples </p>  opamps: "golden rules" and circuit examples </p>  
  <p><b>Thu, Sep. 20</b>  +  <p><b>[[Media:20.309_lect5.pdfThu, Sep. 20]]</b> 
Fourier series & integrals; Fourier transform (continuous & discrete)  Fourier series & integrals; Fourier transform (continuous & discrete)  
</p>  </p>  
Line 70:  Line 70:  
<td width="34%" valign="top">  <td width="34%" valign="top">  
<p><b>Monday, Sep. 18  Friday Sep. 22</b><br>  <p><b>Monday, Sep. 18  Friday Sep. 22</b><br>  
  <u>Lab manual for Weeks 2  +  <u>Lab manual for Weeks 2  4: [[Media:20.309mod1.pdfMeasuring DNA Melting Curves]].</u><br> 
Build optics for DNA melting experiment, build photodiode readout circuit;  Build optics for DNA melting experiment, build photodiode readout circuit;  
calibrate fluorescence signal </p>  calibrate fluorescence signal </p>  
  
  
</td>  </td>  
<td width="30%" valign="top">  <td width="30%" valign="top">  
<p><b>Readings</b>  <p><b>Readings</b>  
[http://www.media.mit.edu/nanoscale/courses/BE309/private/readings/reading_lecture_4.pdf Operational amplifiers.]</p>  [http://www.media.mit.edu/nanoscale/courses/BE309/private/readings/reading_lecture_4.pdf Operational amplifiers.]</p>  
+  <p>[[Media:MatlabIntro.pdfMatlab Tutorial file 1 (the basics)]]</p>  
+  <p>[[Media:MatlabtutorialV2.pdfMatlab Tutorial file 2 (curve fitting, etc.)]]</p>  
<p> </p><p><font color=#aa0000>[[Media:HW1.pdfHOMEWORK SET 1]], due Friday, 9/22 by 12:00 noon.</font></p>  <p> </p><p><font color=#aa0000>[[Media:HW1.pdfHOMEWORK SET 1]], due Friday, 9/22 by 12:00 noon.</font></p>  
</td>  </td>  
Line 85:  Line 85:  
<td valign="top" width="5%"><b>3</b></td>  <td valign="top" width="5%"><b>3</b></td>  
<td width="31%" valign="top">  <td width="31%" valign="top">  
  <p><b>  +  <p><b>Tues, Sep. 25</b><br> 
  Fourier  +  Fourier analysis (cont'd) </p> 
  <p><b>  +  <p><b>Thu, Sep. 27<br> 
  </b>  +  </b>Signals, noise, Power Spectral Density </p> 
  <p  +  <p><b>Fri, Sep. 28</b><br> 
[[20.309:PresentationsStudent presentations]] (Session #1)</font></p>  [[20.309:PresentationsStudent presentations]] (Session #1)</font></p>  
</td>  </td>  
<td width="34%" valign="top">  <td width="34%" valign="top">  
  <p><b><i>NO LAB MONDAY SEP.  +  <p><b><i>NO LAB MONDAY SEP. 24 <br> 
(Student holiday)</i></b></p>  (Student holiday)</i></b></p>  
  <p> <b>Tuesday, Sep.  +  <p> <b>Tuesday, Sep. 25  Friday, Sep. 28</b><br> 
  <u>Lab manual for Weeks 2  +  <u>Lab manual for Weeks 2  4: [[Media:20.309mod1.pdfMeasuring DNA Melting Curves]].</u> <br> 
Complete DNA melting curves apparatus; test perfectmatch, allmismatch,  Complete DNA melting curves apparatus; test perfectmatch, allmismatch,  
and singlebase mismatch DNA strands </p>  and singlebase mismatch DNA strands </p>  
Line 120:  Line 120:  
Scanning probe microscopy (and associated [[Media:criticalband.zipcritical band audio files]])</p>  Scanning probe microscopy (and associated [[Media:criticalband.zipcritical band audio files]])</p>  
<p><b>Thursday, Oct. 5<br>  <p><b>Thursday, Oct. 5<br>  
  </b>  +  </b></p> 
</td>  </td>  
<td width="34%" valign="top">  <td width="34%" valign="top"> 
Revision as of 15:42, 28 August 2007
WEEK  LECTURES & RECITATIONS  LAB  READINGS & ASSIGNMENTS 
Electronics


0 
Thu, Sep. 6 Fri, Sep. 7 (LECTURE) 

1 
Tue, Sep. 11 Thu, Sep. 13 Fri, Sep. 14 (RECITATION) 
Monday, Sep. 10  Friday Sep. 14 
Readings Impedance, frequency response, filters. This brief introduction to diodes will be helpful for working on the labs this week. 
2 
Tue, Sep. 18 Thu, Sep. 20 Fourier series & integrals; Fourier transform (continuous & discrete) Fri, Sep. 21 (RECITATION) MATLAB tutorial and Lab Report Guidelines 
Monday, Sep. 18  Friday Sep. 22 
Readings Operational amplifiers. Matlab Tutorial file 1 (the basics) Matlab Tutorial file 2 (curve fitting, etc.)
HOMEWORK SET 1, due Friday, 9/22 by 12:00 noon. 
3 
Tues, Sep. 25 Thu, Sep. 27 Fri, Sep. 28 
NO LAB MONDAY SEP. 24 Tuesday, Sep. 25  Friday, Sep. 28 
Readings Thursday, Sep. 28 @ 7:00pm – Room 56614 
Mechanics


4 
Tuesday, Oct. 3 Thursday, Oct. 5 
Monday, Oct. 2  Friday, Oct. 6 Lab manual for weeks 46: The Atomic Force Microscope 
Readings
LAB REPORT #1 (Measuring DNA Melting Curves) due Friday, Oct. 6 by 12:00 noon. 
5 
NO LECTURE TUESDAY, OCT. 10 Thursday, Oct. 12 
NO LAB MONTUE Wednesday, Oct. 11  Friday, Oct. 13 Lab manual for weeks 46: The Atomic Force Microscope 
Readings Onepage handout, with a few convolution clarification examples. HOMEWORK SET 2, due Wednesday, 10/11 by 12:00 noon. 
6 
Tuesday, Oct. 17 Thursday, Oct. 19 
Monday, Oct. 16  Friday Oct. 20 Lab manual for weeks 46: The Atomic Force Microscope 
Lab Exercise on Sampling and Aliasing Thursday, Oct. 19 (in class) 
Optics


7 
Tuesday, Oct. 24 Thursday, Oct. 26 
Monday, Oct. 23  Friday, Oct. 27 
Readings Image Processing Readings (from Gonzalez & Woods): 
8 
Tuesday, Oct. 31 Thursday, Nov. 2 
Monday, Oct. 30  Friday, Nov. 3 
LAB REPORT #2 (The Atomic Force Microscope) due Monday, Oct. 30 by 12:00 noon.

9 
Tuesday, Nov. 7 Thursday, Nov. 9 
Monday, Nov. 6  Friday, Nov. 9 NO LAB FRIDAY NOV. 10 
Readings HOMEWORK SET 3.5 (PMT & photon counting) due Tuesday, Nov. 7 in class. 
10 
Tuesday, Nov. 14 Thursday, Nov. 16 
Monday, Nov. 13  Friday, Nov. 17 
Thursday, Nov. 16 @ 8:00pm – Room 56614 
11 
Tuesday, Nov. 21 NO LECTURE THURSDAY, NOV. 23 
Monday, Nov. 20  Wednesday, Nov. 24 Papers referenced in the lab manual: NO LAB THUFRI 
MATLAB scripts for calculating MSD and G* Three papers about peacock feathers: 
12 
Tuesday, Nov. 28 Thursday, Nov. 30 
Monday, Nov. 27  Wednesday, Nov. 29 Wednesday, Nov. 29  Friday, Dec. 1 Preprint of AJP paper by Appleyard et al. on the 20.309 traps. 
Thursday, Nov. 30 @ 8:00pm – Room 56614 
13 
Tuesday, Dec. 5 Thursday, Dec. 7 
Monday, Dec. 4  Wednesday Dec. 6 Thursday, Dec. 7  Friday, Dec. 8 
LAB REPORT #3 (Fluorescence Microscope) due Monday, Dec. 4, by 12:00 noon. 
14  Tuesday, Dec. 12 Thursday, Dec. 14 
Monday, Dec. 11  Wednesday, Dec. 13 
LAB REPORT #4 (Optical Trapping) due Monday, Dec. 11, by 12:00 noon. Tuesday, Dec. 12 (in class) 