840:153g:Projects/project22/2012/10/04: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
(fix raw html notebook nav)
 
(6 intermediate revisions by one other user not shown)
Line 2: Line 2:
|-
|-
|style="background-color: #EEE"|[[Image:owwnotebook_icon.png|128px]]<span style="font-size:22px;"> Prodigiosin Production by E. Coli.</span>
|style="background-color: #EEE"|[[Image:owwnotebook_icon.png|128px]]<span style="font-size:22px;"> Prodigiosin Production by E. Coli.</span>
|style="background-color: #F2F2F2" align="center"|<html><img src="/images/9/94/Report.png" border="0" /></html> [[{{#sub:{{FULLPAGENAME}}|0|-11}}|Main project page]]<br />{{#if:{{#lnpreventry:{{FULLPAGENAME}}}}|<html><img src="/images/c/c3/Resultset_previous.png" border="0" /></html>[[{{#lnpreventry:{{FULLPAGENAME}}}}{{!}}Previous entry]]<html>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</html>}}{{#if:{{#lnnextentry:{{FULLPAGENAME}}}}|[[{{#lnnextentry:{{FULLPAGENAME}}}}{{!}}Next entry]]<html><img src="/images/5/5c/Resultset_next.png" border="0" /></html>}}
|style="background-color: #F2F2F2" align="center"|[[File:Report.png|frameless|link={{#sub:{{FULLPAGENAME}}|0|-11}}]][[{{#sub:{{FULLPAGENAME}}|0|-11}}|Main project page]]<br />{{#if:{{#lnpreventry:{{FULLPAGENAME}}}}|[[File:Resultset_previous.png|frameless|link={{#lnpreventry:{{FULLPAGENAME}}}}]][[{{#lnpreventry:{{FULLPAGENAME}}}}{{!}}Previous entry]]&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;}}{{#if:{{#lnnextentry:{{FULLPAGENAME}}}}|[[{{#lnnextentry:{{FULLPAGENAME}}}}{{!}}Next entry]][[File:Resultset_next.png|frameless|link={{#lnnextentry:{{FULLPAGENAME}}}}]]}}
|-
|-
| colspan="2"|
| colspan="2"|
Line 8: Line 8:


==PCR Results and Retry==
==PCR Results and Retry==
On Tuesday we ran simple gel electrophoresis of our PCR products. Unfortunately, our DNA's signal was very weak and the positive control failed as well. Today we attempted to concentrate the DNA in our samples in a Speed Vacuum Concentrator and will run PCR on this DNA to check said concentration. If the DNA is sufficiently concentrated, we will take another shot at PCR. We will first retest the positive control with a few of our primers to make sure the controls work properly before we go all in.
On Tuesday we ran simple gel electrophoresis of our PCR products. Unfortunately, our DNA's signal was very weak and the positive control failed as well. Today we attempted to concentrate the DNA in our samples in a Speed Vacuum Concentrator and will run PCR on this DNA on Tuesday to check said concentration. If the DNA is sufficiently concentrated, we will take another shot at PCR next week. We will first retest the positive control with a few of our primers to make sure the controls work properly before we go all in with our biobrick and nonbiobrick compatible primers.


Wells 1-12 were ours (markers at 5 and 12 going right to left)
Failed PCR picture 1 (positive controls, PCR and marker - only the marker showed up with any significant brightness)
[http://openwetware.org/images/thumb/4/44/%21GROUP22.25O.tif/640px-%21GROUP22.25O.tif.png]
[[Image:!GROUP22.25_(2).png]]
 
Failed PCR picture 2 (negative controls and marker) - Note that one of our negative controls was excluded from this picture
[[Image:!GROUP24.2_(2).png]]


Wells 18-20 were ours (negative controls, far left side)
[http://openwetware.org/images/thumb/e/ef/%21GROUP24.2.tif/640px-%21GROUP24.2.tif.png]


<!-- ##### DO NOT edit below this line unless you know what you are doing. ##### -->
<!-- ##### DO NOT edit below this line unless you know what you are doing. ##### -->

Latest revision as of 22:05, 26 September 2017

Prodigiosin Production by E. Coli. Main project page
Previous entry      Next entry

PCR Results and Retry

On Tuesday we ran simple gel electrophoresis of our PCR products. Unfortunately, our DNA's signal was very weak and the positive control failed as well. Today we attempted to concentrate the DNA in our samples in a Speed Vacuum Concentrator and will run PCR on this DNA on Tuesday to check said concentration. If the DNA is sufficiently concentrated, we will take another shot at PCR next week. We will first retest the positive control with a few of our primers to make sure the controls work properly before we go all in with our biobrick and nonbiobrick compatible primers.

Failed PCR picture 1 (positive controls, PCR and marker - only the marker showed up with any significant brightness)

Failed PCR picture 2 (negative controls and marker) - Note that one of our negative controls was excluded from this picture