AVM BIOL368 Week 9: Difference between revisions
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# Markham, R.B., Wang, W.C., Weisstein, A.E., Wang, Z., Munoz, A., Templeton, A., Margolick, J., Vlahov, D., Quinn, T., Farzadegan, H., & Yu, X.F. (1998). Patterns of HIV-1 evolution in individuals with differing rates of CD4 T cell decline. ''Proc Natl Acad Sci U S A. 95'', 12568-12573. doi: 10.1073/pnas.95.21.12568 | |||
#* [http://www.pnas.org/content/95/21/12568.long Publisher Full text] | |||
#*[http://www.pnas.org/content/95/21/12568.full.pdf+html PDF]. | |||
{{Template: Avery_Vernon-Moore}} | {{Template: Avery_Vernon-Moore}} | ||
Revision as of 15:58, 25 October 2016
Purpose
The purpose of this weeks lab is to define my HIV structure project and complete this in-class HIV structure activity.
Methods and Results
HIV Structure Project: What is your question?
- Does diversity and divergence increase within the amino acid sequences over time more within the rapid progressors compared to non-progressors?
Make a prediction about the answer to your question before you begin your analysis.
- Since divergence and diversity increases over time within the DNA sequences for all progressor types, and more so within the rapid progress ors, we would expect to see more diversity within the amino acid sequences over time within the rapid progressors.
Which subjects, visits, and clones will you use to answer your question?
- We will take the first and last visit of three of the rapid progressors and three non-progressors.
Data and Files
Conclusion
Acknowledgments
References
- Markham, R.B., Wang, W.C., Weisstein, A.E., Wang, Z., Munoz, A., Templeton, A., Margolick, J., Vlahov, D., Quinn, T., Farzadegan, H., & Yu, X.F. (1998). Patterns of HIV-1 evolution in individuals with differing rates of CD4 T cell decline. Proc Natl Acad Sci U S A. 95, 12568-12573. doi: 10.1073/pnas.95.21.12568
Weekly Assignments:
Assignment 1 Assignment 2 Assignment 3 Assignment 4 Assignment 5 Assignment 6 Assignment 7 Assignment 8 Assignment 9 Assignment 10 Assignment 11 Assignment 12 Assignment 14 Assignment 15
Individual Journals:
"Week 1: Create Wiki Page" Individual Journal 2 Individual Journal 3 Individual Journal 4 Individual Journal 5 Individual Journal 6 Individual Journal 7 Individual Journal 8 Individual Journal 9 Individual Journal 10 Individual Journal 11 Individual Journal 12 No Week 13 Assignment Individual Journal 14 Individual Journal 15
Class Journal 1 Class Journal 2 Class Journal 3 Class Journal 4 Class Journal 5 Class Journal 6 Class Journal 7 Class Journal 8 Class Journal 9 Class Journal 10 Class Journal 11 Class Journal 12 Class Journal 14 Class Journal 15
