Alex A. Cardenas Week 3: Difference between revisions
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==Methods== | ==Methods== | ||
*Went to pubmed to find the Markham paper | |||
*Clicked on nucleotide under the links to find the sequences | |||
*Retrieved the sequence file S4V2-4 and viewed it in the FASTA format | |||
**Which was then copy and pasted into Biology workbench. | |||
*Copy and pasted sequences into a txt. file saved it as 'sequence.txt' | |||
*Uploaded all of the files and then ran them all using ClustalW | |||
Questions | |||
#What was the accession number of the sequence you chose? | |||
**AF016818 | |||
#Which subject of the study was that HIV sequence from? Which section of the record contains information about who the HIV was collected from? | |||
**Subject 2 visit 4 | |||
**Envolope glycoprotein region V3 (env) gene | |||
Revision as of 14:34, 14 September 2011
Methods
- Went to pubmed to find the Markham paper
- Clicked on nucleotide under the links to find the sequences
- Retrieved the sequence file S4V2-4 and viewed it in the FASTA format
- Which was then copy and pasted into Biology workbench.
- Copy and pasted sequences into a txt. file saved it as 'sequence.txt'
- Uploaded all of the files and then ran them all using ClustalW
Questions
- What was the accession number of the sequence you chose?
- AF016818
- Which subject of the study was that HIV sequence from? Which section of the record contains information about who the HIV was collected from?
- Subject 2 visit 4
- Envolope glycoprotein region V3 (env) gene
