Alex A. Cardenas Week 8: Difference between revisions

Revision as of 15:36, 19 October 2011

Retreiving protein sequences for gp120 (pp. 42-51)
Went to www.expasy.org/sprot/.
Envelope glycoprotein gp120 was tryped into search box and retreived. Contains 208 A.A.'s
- Entry Name - Q2MEA9_9HIV1
- Primary Accession Number - Q2MEA9
FASTA format was viewed (FATSA - a sequence alignment-and-database-scanning program).
Related protein sequences retrieved by advanced search methods.

@@ Line 1: / Line 1: @@
 ==Chapter 2==
-*Retreiving protein sequences for gp120.
+*Retreiving protein sequences for gp120 (pp. 42-51)
 *Went to www.expasy.org/sprot/.
 *Envelope glycoprotein gp120 was tryped into search box and retreived. Contains 208 A.A.'s
@@ Line 6: / Line 6: @@
 **Primary Accession Number - Q2MEA9
 *FASTA format was viewed (FATSA - a sequence alignment-and-database-scanning program).
-*
+*Related protein sequences retrieved by advanced search methods.
+==Chapter 4==
+*Reading a SWISS-PROT entry (pp. 110-123). The link can be found [[http://www.uniprot.org/uniprot/Q2MEA9 here]].
+*Went through steps in deciphering the envelope glycoprotein gp120 swiss-prot entry. Information displayed below.
+**Entry Name - Q2MW9_9HIV1
+**Primary Accession Number - Q2MEA9
+**Integrated into UniProtKB - February 21, 2006
+**Last sequence update - February 21, 2006
+**Last modified - September 21, 2011
+*Name and origin of the protein were observed (below).
+**Protein Name - Envelope glycoprotein gp120
+**Gene Name - gp120
+**Organism - Human immunodeficiency virus 1
+**Taxonomic identifiers - 11676 [NCBI]
+**Taxonomic lineage - Viruses › Retro-transcribing viruses › Retroviridae › Orthoretrovirinae › Lentivirus › Primate lentivirus group
 ==Links==