Amanda N. Wavrin Week 8: Difference between revisions
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*Used the ExPASy server to search DUTPase coli, 105 results appeared | *Used the ExPASy server to search DUTPase coli, 105 results appeared | ||
*Then searched gp120 and decided to use envelope glycoprotein gp120 with accession number A0A897 | *Then searched gp120 and decided to use envelope glycoprotein gp120 with accession number A0A897 | ||
[[Image:Screen shot.jpg|thumb|center|upright= | [[Image:Screen shot.jpg|thumb|center|upright=3.0]] | ||
*We then retrieved the FASTS Format of the gp120 sequence | *We then retrieved the FASTS Format of the gp120 sequence | ||
**>tr|A0A897|A0A897_9HIV1 Envelope glycoprotein gp120 (Fragment) OS=Human immunodeficiency virus 1 GN=env PE=4 SV=1 | **>tr|A0A897|A0A897_9HIV1 Envelope glycoprotein gp120 (Fragment) OS=Human immunodeficiency virus 1 GN=env PE=4 SV=1 | ||
NLTDNAKTIIVHLNESVEINCTRPFNNTRTSXRIGPGQVFYRTGDITGSIRRAYCEINGT | NLTDNAKTIIVHLNESVEINCTRPFNNTRTSXRIGPGQVFYRTGDITGSIRRAYCEINGT | ||
KWNKVLXQVTEKLXEH | KWNKVLXQVTEKLXEH | ||
Revision as of 12:04, 9 March 2010
Analyzing Protein Structure
- Using Bioinformatics for Dummies
Retrieving Protein Sequences
- Used the ExPASy server to search DUTPase coli, 105 results appeared
- Then searched gp120 and decided to use envelope glycoprotein gp120 with accession number A0A897
- We then retrieved the FASTS Format of the gp120 sequence
- >tr|A0A897|A0A897_9HIV1 Envelope glycoprotein gp120 (Fragment) OS=Human immunodeficiency virus 1 GN=env PE=4 SV=1
NLTDNAKTIIVHLNESVEINCTRPFNNTRTSXRIGPGQVFYRTGDITGSIRRAYCEINGT KWNKVLXQVTEKLXEH
