Arking:JCAOligoTutorialHome: Difference between revisions
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<span style='font-size:18.0pt'> | <span style='font-size:18.0pt'> | ||
Synthetic Biology Tutorial<br> | |||
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==Lectures== | |||
If you'd like a more advanced series of topics, you might check out my video lectures: | |||
http://www.youtube.com/channel/UCSVDJJWZ77tOzwl4L9nyg2w/videos?view=1&sort=da&flow=list<br> | |||
They are listed in order here: [[Synthetic Biology Trails]] | |||
==The Basics== | ==The Basics== | ||
'''Think the "Central Dogma" involves a kennel of chihuahuas? You need to start here with the basics.''' | '''Think the "Central Dogma" involves a kennel of chihuahuas? You need to start here with the basics.''' | ||
<span style='font-size:18.0pt'> | <span style='font-size:18.0pt'> | ||
[ | [[Media:Bare_Bones_Biochemistry.pdf | Bare Bones Biochemistry]] | ||
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<span style='font-size:18.0pt'> | <span style='font-size:18.0pt'> | ||
[ | [[Media:Basic_Molecular_Biology.pdf | Basic Molecular Biology]] | ||
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==Technical Design== | ==Technical Design== | ||
<span style='font-size:18.0pt'> | <span style='font-size:18.0pt'> | ||
[[Arking: | [[Arking:JCAOligoTutorial1b | Basic Oligo Design]] | ||
[[Arking:JCAOligoTutorial1 | (old)]] | |||
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<span style='font-size:18.0pt'> | <span style='font-size:18.0pt'> | ||
[[Arking: | [[Arking:JCAOligoTutorial2b | Special Case: Single Internal Restriction Sites]] | ||
[[Arking:JCAOligoTutorial2 | (old)]] | |||
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<span style='font-size:18.0pt'> | <span style='font-size:18.0pt'> | ||
[[Arking: | [[Arking:JCAOligoTutoriaGG | Golden Gate Cloning]] | ||
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[[Arking:JCAOligoTutorial6 | Sequencing Analysis]] | [[Arking:JCAOligoTutorial6 | Sequencing Analysis]] | ||
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==Advanced Technical Design== | |||
<span style='font-size:18.0pt'> | |||
[[Arking:JCAOligoTutoria20 | Working with Translational Fusions]] | |||
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[[Arking:JCAOligoTutorial3 | Implementing the Basic Construction File]] | [[Arking:JCAOligoTutorial3 | Implementing the Basic Construction File]] | ||
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==Introduction to Structural Biology and Part Engineering== | |||
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[[Arking:JCAOligoTutoria24 | DeepView Basics]] | |||
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<span style='font-size:18.0pt'> | |||
[[Arking:JCAOligoTutoria25 | Tour of Structural Biology]] | |||
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---- | ---- | ||
[[Retired Sections]]<br> | [[Retired Sections]]<br> | ||
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{{Template:JCA_Arkin_tutorialfooter}}<br> | {{Template:JCA_Arkin_tutorialfooter}}<br> | ||
[[Arking:JCAOligoTutoria26 | . ]] | [[Arking:JCAOligoTutoria26 | . ]] | ||
[[Arking:JCAOligoTutoria27 | . ]] | [[Arking:JCAOligoTutoria27 | . ]] | ||
[[Arking:JCAOligoTutoria28 | . ]] | [[Arking:JCAOligoTutoria28 | . ]] | ||
Latest revision as of 21:57, 11 September 2019
|
Synthetic Biology Tutorial |
|---|
Lectures
If you'd like a more advanced series of topics, you might check out my video lectures:
http://www.youtube.com/channel/UCSVDJJWZ77tOzwl4L9nyg2w/videos?view=1&sort=da&flow=list
They are listed in order here: Synthetic Biology Trails
The Basics
Think the "Central Dogma" involves a kennel of chihuahuas? You need to start here with the basics.
Bare Bones Biochemistry
Basic Molecular Biology
Practical DNA
What is PCR?
Introduction to Biobricks and Basic Cloning
This tutorial is best used in conjunction with the sequence editor ApE. Read the section about ApE for a description of how to install it.
Installing ApE
Overview of Cloning
Introduction to Biobricks
Introduction to Refactoring
Technical Design
Basic Oligo Design
(old)
Special Case: Single Internal Restriction Sites
(old)
Construction of short parts
Golden Gate Cloning
Design of composite parts
Keeping track of construction files
Sequencing Analysis
Advanced Technical Design
Working with Translational Fusions
Circularly Permuted Proteins
The "what did they make" game
Implementation
Implementing the Basic Construction File
Introduction to Structural Biology and Part Engineering
DeepView Basics
Tour of Structural Biology
Things you should know
Common Pitfalls and Tips
Origins of replication
The Critical Path
If you have any comments or want to report a potential error in the tutorial, please email me (Chris Anderson) at JCAnderson2167-at-gmail.com
