Augusto & Jessica's Research Proposal Information: Difference between revisions

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Sorry Augusto, I didn't get very far.  I'll work on it more tomorrow during lab time.
We want to engineer a microorganism or virus that will improve either:
We want to engineer a microorganism or virus that will improve either:
*sewage water treatment/waste degradation
*sewage water treatment/waste degradation (probably this)
*biofuel synthesis
*biofuel synthesis


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==Social Context==
==Social Context==
*under-treated sewage is the main source of pathogens in water
*under-treated sewage is the main source of pathogens in water
==Random Thoughts==
*If we design a bacteria, perhaps utilize a protein degradation switch that will allow the bacteria to be destroyed at will




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Grilly C, Stricker J, Pang WL, Bennett MR, Hasty J. A synthetic gene network for tuning protein degradation in Saccharomyces cerevisiae . Molecular Systems Biology 2007; 3:127
Grilly C, Stricker J, Pang WL, Bennett MR, Hasty J. A synthetic gene network for tuning protein degradation in Saccharomyces cerevisiae . Molecular Systems Biology 2007; 3:127
Calvert P. Printing Cells. Science 2007; 318:208-209

Revision as of 12:30, 15 November 2007

We want to engineer a microorganism or virus that will improve either:

  • sewage water treatment/waste degradation (probably this)
  • biofuel synthesis

Sewage Water Treatment

Scientific Background

  • Bacteria are commonly used indicators of the effectiveness of wastewater treatment
    • May not accurately indicate the effectiveness of removing viruses and protozoa
  • Bacteriophages have been proposed to be potential indicators of viruses
  • sulphite-reducing bacteria have been proposed to be potential indicators of viruses

Social Context

  • under-treated sewage is the main source of pathogens in water

Random Thoughts

  • If we design a bacteria, perhaps utilize a protein degradation switch that will allow the bacteria to be destroyed at will


References

Gaussier H, Yang Q et al. Building a virus from scratch: assembly of an infectious virus using purified components in a rigorously defined biochemical assay system. Journal of Molecular Biology 2004; 357:1154-66

Kim DY and Rhe YH. Biodegradation of microbial and synthetic polyesters by fungi. Applications of Microbiology Biotechnology 61:300-308

Lucena F, Duran AE, et al. Reduction of bacterial indicators and bacteriophages infecting faecal bacteria in primary and secondary wastewater treatments. Journal of Applied Microbiology 2004; 97:1069-1076

Grilly C, Stricker J, Pang WL, Bennett MR, Hasty J. A synthetic gene network for tuning protein degradation in Saccharomyces cerevisiae . Molecular Systems Biology 2007; 3:127