BE.180:Syllabus

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[http://student.mit.edu/catalog/search.cgi?search=be.180 Catalog entry]<br>
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{{Template:BE.180}}
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When and where: TR12 (36-156)
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{| border=1px
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<br>
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{| border=0px
!MODULE
!MODULE
!DAY
!DAY
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!TA
!TA
!Concept
!Concept
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!Assignment
|--
|--
| 1
| 1
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| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[BE.180:Abstraction1 | Abstraction: From DNA to Parts]]
| [[BE.180:Abstraction1 | Abstraction: From DNA to Parts]]
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|
|--
|--
| 2
| 2
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| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[BE.180:Abstraction2 | Abstraction: From Parts to Devices ]]
| [[BE.180:Abstraction2 | Abstraction: From Parts to Devices ]]
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| Assignment 1 released
|--
|--
| 3
| 3
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| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[BE.180:Devices1 | Device Modeling & Simplification]]
| [[BE.180:Devices1 | Device Modeling & Simplification]]
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|
|--
|--
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! colspan="5" | President's Day holiday Feb 20, No class Tues Feb 21(Mon schedule)  
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! colspan="6" | President's Day holiday Feb 20, No class Tues Feb 21(Mon schedule)  
|--
|--
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| *
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| GL
| 1
| 1
| Thurs Feb 23
| Thurs Feb 23
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| [[Drew Endy | DE]]
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| [[Tom Knight | TK]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[BE.180:TK | Tom Knight lecture]]
| [[BE.180:TK | Tom Knight lecture]]
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| Assignment 1 due
|--
|--
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| *
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| GL
| 2
| 2
| Tues Feb 28
| Tues Feb 28
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| [[Drew Endy | DE]]
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| [[Gerald J Sussman | GJS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[BE.180:GJS | Gerry Sussman lecture]]
| [[BE.180:GJS | Gerry Sussman lecture]]
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| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[BE.180:DeviceAnalysis | Device Analysis]]
| [[BE.180:DeviceAnalysis | Device Analysis]]
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| Assignment 2 released
|--
|--
| 3
| 3
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| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[BE.180:Decomposition1 | Decomposition of Complex Problems]] (3/10 is last day to add)
| [[BE.180:Decomposition1 | Decomposition of Complex Problems]] (3/10 is last day to add)
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| Assignment 2 due; 3 released
|--
|--
| 4
| 4
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| [[Drew Endy | DE]]
| [[Drew Endy | DE]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
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| [[BE.180:Decomposition2 | From Systems to DNA]]
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| [[BE.180:Devices | Genetic Devices & Device Modeling]]
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| Assignment 3 due
|--
|--
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| 0
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| D
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| 12
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| 1
| Tues Mar 21
| Tues Mar 21
| [[Drew Endy | DE]]
| [[Drew Endy | DE]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
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| [[BE.180:SequencceOptimization | Sequence Optimization]]
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| [[BE.180:Discussion1 | Discussion & Review]]
|--
|--
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| 0
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| E
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| 13
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| 1
| Thurs Mar 23
| Thurs Mar 23
| [[Drew Endy | DE]]
| [[Drew Endy | DE]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
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| [[BE.180:DetectIdent | DNA Detection & Identification]]
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| [[BE.180:Exam1 | Exam 1]] (covers through 16 March lecture)
|--
|--
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|
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! colspan="6" | Spring Break Mar 27-31
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|
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! colspan="4" | Spring Break Mar 27-31
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|--
|--
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| colspan="6" |
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| 5
-
|--
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| 1
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| 0
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| 14
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| Tues Apr 4
| Tues Apr 4
| [[Drew Endy | DE]]
| [[Drew Endy | DE]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
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| [[BE.180: ]]
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| [[BE.180:SequenceOptimization | Sequence Optimization]]
|--
|--
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| 0
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| 5
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| 15
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| 2
| Thurs Apr 6
| Thurs Apr 6
| [[Drew Endy | DE]]
| [[Drew Endy | DE]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
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| [[BE.180: ]]
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| [[BE.180:DetectIdent | DNA Detection & Identification]]
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| Assignment 4 released
|--
|--
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| 0
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| 6
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| 16
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| 1
| Tues Apr 11
| Tues Apr 11
| [[Drew Endy | DE]]
| [[Drew Endy | DE]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
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| [[BE.180: ]]
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| [[BE.180:SpaceTime1 | Space and Time Systems]]
|--
|--
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| 0
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| 6
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| 17
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| 2
| Thurs Apr 13
| Thurs Apr 13
| [[Drew Endy | DE]]
| [[Drew Endy | DE]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
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| [[BE.180: ]]
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| [[BE.180:SpaceTime2 | Programming Space & Time Systems]]
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| Assignment 4 due
|--
|--
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|
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! colspan="6" | Patriot's day holiday April 17-18
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|
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! colspan="4" | Patriot's day holiday April 17-18
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|--
|--
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| 0
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| 7
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| 18
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| 1
| Thurs Apr 20
| Thurs Apr 20
| [[Drew Endy | DE]]
| [[Drew Endy | DE]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
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| [[BE.180: ]]
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| [[BE.180:SpaceTime2 | Programming Space & Time Systems]]
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|
|--
|--
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| 0
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| 7
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| 19
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| 2
| Tues Apr 25
| Tues Apr 25
| [[Drew Endy | DE]]
| [[Drew Endy | DE]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
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| [[BE.180: ]]
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| [[User:Yeem/BE.180 notes/4-25 | Growing Point Language]]
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| Assignment 5 released
|--
|--
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| colspan="6" |
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| 7
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|--
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| 3
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| 0
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| 20
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| Thurs Apr 27
| Thurs Apr 27
| [[Drew Endy | DE]]
| [[Drew Endy | DE]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
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| [[BE.180: ]] Note: 27 April is last day to drop
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| [[BE.180:CCL | "Crop Circle" Language]] (4/27 is last day to drop)
|--
|--
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| 0
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| 7
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| 21
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| 4
| Tues May 2
| Tues May 2
| [[Drew Endy | DE]]
| [[Drew Endy | DE]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
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| [[BE.180: ]]
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| [[BE.180:Modeling | ]]
|--
|--
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| 0
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| 7
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| 22
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| 5
| Thurs May 4
| Thurs May 4
| [[Drew Endy | DE]]
| [[Drew Endy | DE]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
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| [[BE.180: ]]
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| <!-- old link: [[BE.180:Testing | ]] -->[[User:Yeem/BE.180 notes/Semester review|Semester review]]
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| Assignment 5 due
|--
|--
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| 0
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| D
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| 23
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| 2
| Tues May 9
| Tues May 9
| [[Drew Endy | DE]]
| [[Drew Endy | DE]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
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| [[BE.180: ]]
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| [[BE.180:Discussion2 | ]]
|--
|--
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| 0
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| E
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| 24
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| 2
| Thurs May 11
| Thurs May 11
| [[Drew Endy | DE]]
| [[Drew Endy | DE]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
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| [[BE.180: ]]
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| [[BE.180:Exam2 | Exam2]] (comprehensive through 4 May lecture)
|--
|--
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| 0
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| EOC
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| 25
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| 1
| Tues May 16
| Tues May 16
| [[Drew Endy | DE]]
| [[Drew Endy | DE]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
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| [[BE.180: ]]
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| [[BE.180:LDOC | Course Evaluation & Wrap-Up]]
|--
|--
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| 0
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| -
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| 26
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| -
| Thurs May 18
| Thurs May 18
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| [[Drew Endy | DE]]
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| No class
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| [[Sabrina_Spencer | SS]], [[Lauffenburger:Laura_Sontag | LS]]
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|  
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| [[BE.180:LastDay | Wrap Up]]
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|  
|}
|}
</div>
</div>

Current revision

BE.180 Biological Engineering Programming

Image:BE180banner.jpg

Home        Syllabus        Assignments        Exams        Expectations       

Programming Tutorial        Biology Tutorial       


MODULE DAY DATE LECTURER TA Concept Assignment
1 1 Tues Feb 7 DE SS, LS Biological Engineering & Programming DNA
2 1 Thurs Feb 9 DE SS, LS Abstraction: From DNA to Parts
2 2 Tues Feb 14 DE SS, LS Abstraction: From Parts to Devices Assignment 1 released
3 1 Thurs Feb 16 DE SS, LS Device Modeling & Simplification
President's Day holiday Feb 20, No class Tues Feb 21(Mon schedule)
GL 1 Thurs Feb 23 TK SS, LS Tom Knight lecture Assignment 1 due
GL 2 Tues Feb 28 GJS SS, LS Gerry Sussman lecture
3 2 Thurs Mar 2 DE SS, LS Device Analysis Assignment 2 released
3 3 Tues Mar 7 DE SS, LS Device Composition
4 1 Thurs Mar 9 DE SS, LS Decomposition of Complex Problems (3/10 is last day to add) Assignment 2 due; 3 released
4 2 Tues Mar 14 DE SS, LS Devices, Revisited
4 3 Thurs Mar 16 DE SS, LS Genetic Devices & Device Modeling Assignment 3 due
D 1 Tues Mar 21 DE SS, LS Discussion & Review
E 1 Thurs Mar 23 DE SS, LS Exam 1 (covers through 16 March lecture)
Spring Break Mar 27-31
5 1 Tues Apr 4 DE SS, LS Sequence Optimization
5 2 Thurs Apr 6 DE SS, LS DNA Detection & Identification Assignment 4 released
6 1 Tues Apr 11 DE SS, LS Space and Time Systems
6 2 Thurs Apr 13 DE SS, LS Programming Space & Time Systems Assignment 4 due
Patriot's day holiday April 17-18
7 1 Thurs Apr 20 DE SS, LS Programming Space & Time Systems
7 2 Tues Apr 25 DE SS, LS Growing Point Language Assignment 5 released
7 3 Thurs Apr 27 DE SS, LS "Crop Circle" Language (4/27 is last day to drop)
7 4 Tues May 2 DE SS, LS
7 5 Thurs May 4 DE SS, LS Semester review Assignment 5 due
D 2 Tues May 9 DE SS, LS
E 2 Thurs May 11 DE SS, LS Exam2 (comprehensive through 4 May lecture)
EOC 1 Tues May 16 DE SS, LS Course Evaluation & Wrap-Up
- - Thurs May 18 No class
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