BIOL398-03/S13:Week 14: Difference between revisions
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==== Creating your model input file ==== | ==== Creating your model input file ==== | ||
[[Media:Belle_TF_DegradationRates.xls | Degradation rates for transcription factors from Belle et. all (2006)]]. | * Your first task will be to create a model input file using the Dahlquist lab data you have been working with. | ||
* Your file will be similar to the [http://openwetware.org/images/7/77/Full_schade_data.xls sample data input file that you used last week, but with your expression data and network. | |||
* [[Media:Belle_TF_DegradationRates.xls | Degradation rates for transcription factors from Belle et. all (2006)]]. | |||
== Shared Journal Assignment == | == Shared Journal Assignment == | ||
Revision as of 19:20, 22 April 2013
This journal entry is due on Friday, April 26 at midnight PDT (Thursday night/Friday morning). NOTE that the server records the time as Eastern Daylight Time (EDT). Therefore, midnight will register as 03:00.
Individual Journal Assignment
- Store this journal entry as "username Week 14" (i.e., this is the text to place between the square brackets when you link to this page).
- Create the following set of links. (HINT: you can do all of this easily by adding them to your template and then using the template on your pages.)
- Link to your journal entry from your user page.
- Link back from your journal entry to your user page.
- Link to this assignment from your journal entry.
- Don't forget to add the "BIOL398-03/S13" category to the end of your wiki page.
Tasks
Creating your model input file
- Your first task will be to create a model input file using the Dahlquist lab data you have been working with.
- Your file will be similar to the [http://openwetware.org/images/7/77/Full_schade_data.xls sample data input file that you used last week, but with your expression data and network.
- Degradation rates for transcription factors from Belle et. all (2006).
- Store your journal entry in the shared Class Journal Week 14 page. If this page does not exist yet, go ahead and create it (congratulations on getting in first :) )
- Link to your journal entry from your user page.
- Link back from the journal entry to your user page.
- Sign your portion of the journal with the standard wiki signature shortcut (
~~~~). - Add the "BIOL398-03/S13" category to the end of the wiki page (if someone has not already done so).
Reflection
Reflect back on your learning for this project and for the entire semester and answer the following:
- What is the value of combining biological and mathematical approaches to scientific questions?
- Looking back on your reflections on the Janovy and Steward readings from the Week 1 Class Journal, do you have any further insights to share? Have your answers changed to those original reflection questions? Why or why not?
