BME100 f2013:Projects6

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Lab Write-Up 1 | Lab Write-Up 2 | Lab Write-Up 3
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Contents

Lab Write-Up 6

Please keep in mind that Wiki pages are time-stamped and all past versions are saved in the page history. Only the version that was saved on or before the due-date will be graded. Any changes/ corrections after the due date are okay, but will not be graded.

Your Bayesian statistics work must be submitted via an online quiz at Blackboard. Do not post your answers in Lab Report 6. In order to access the quiz:

  1. Go to the BME100 Blackboard site
  2. Click Content (in the left menu), then the Quizzes folder, then Bayes Calculation Quiz for your section (AM or PM)
  3. You may attempt the quiz multiple times. The number of points you earn will be 10% of your individual Lab Report 6 score.
  4. You must complete the quiz by the Lab Report 6 due date. After that time, the quiz will be closed.



Wednesday, 9:00 AM

Due Wednesday, November 27, 9:00 AM.

Group 1 Group 2 Group 3 Group 4 Group 5
Group 6 Group 7 Group 8 Group 9 Group 10
Group 11 Group 12 Group 13 Group 14 Group 15
Group 16 Group 17 Group 18


DNA Amplification and Measurement Results

pos = positive; neg = negative (no amplification)
Team's Conclusion - based on the median μg/mL value of three replicates and compared to positive and negative control PCR reactions
Expected - the "real answers", based on how the pre-mixed primer/template samples were set up by the instructor. If the Team's Conclusion matches the Expected outcome, then the procedure worked.

Team Patient ID Measured (ug/mL) Team's Conclusion Expected
AM 1676180.600.650.61incompletepos
783790.620.600.73incompletepos
AM 2563665.544.795.49pospos
863614.593.913.42pospos
AM 3731907.627.897.788pospos
435668.1610.6211.1pospos
AM 4899410.172.271.6pospos
597492.912.291.92pospos
AM 5322987.209.408.4incompletepos
266857.507.209.2incompleteneg
AM 6883504.745.104.26pospos
655830.360.060.12negneg
AM 71093918.60-0.2411.124pospos
57695-1.39-1.11-1.13404negneg
AM 8100721.801.801.8pospos
83576-0.12-0.09-0.05negneg
AM 94639811.5310.037.989pospos
73945-1.84-1.846-1.583negneg
AM 1051225incompleteincompleteincompleteincompleteneg
60779incompleteincompleteincompleteincompletepos
AM 1126317-24.60-23.18-22.28negneg
63107338.55319.41338.65pospos
AM 12395261.590.932.44negneg
3185611.1412.6014.29pospos
AM 13267340.33-1.08-0.27negneg
227071.462.37-1.88pospos
AM 14165783.903.863.74negneg
2504510.3712.3113.115pospos
AM 157808612.668.648.05no conclusionneg
324457.479.417.53no conclusionneg
AM 162837512.6612.6813.14no conclusionneg
231700.860.920.97no conclusionneg
AM 1780926incompleteincompleteincompleteincompleteneg
83588incompleteincompleteincompleteincompleteneg
AM 18349020.450.4260.47negneg
399050.670.340.45negneg

Wednesday, 12:00 PM

Due Wednesday, November 27, 12:00 PM

Group 1 Group 2 Group 3 Group 4 Group 5
Group 6 Group 7 Group 8 Group 9 Group 10
Group 11 Group 12 Group 13 Group 14 Group 15
Group 16 Group 17 Group 18


DNA Amplification and Measurement Results

pos = positive; neg = negative (no amplification)
Team's Conclusion - based on the median μg/mL value of three replicates and compared to positive and negative control PCR reactions
Expected - the "real answers", based on how the pre-mixed primer/template samples were set up by the instructor. If the Team's Conclusion matches the Expected outcome, then the procedure worked.

Team Patient ID Measured (ug/mL) Team's Conclusion Expected
PM 1169462.36-2.24-4.22negpos
4629634.4975.1264.7pospos
PM 2438494.52848.12353.6237pospos
808537.45255.58049.739negpos
PM 377842178.8147.1147.6pospos
26204152.459.8117.3pospos
PM 451917incompleteincompleteincompleteincompletepos
17539incompleteincompleteincompleteincompletepos
PM 54019715.0820.5820.61pospos
90029-8.77-9.05-11.15negneg
PM 647569incompleteincompleteincompleteincompletepos
67318incompleteincompleteincompleteincompleteneg
PM 7920695.563.862.92pospos
276770.83-0.27-1.03negneg
PM 82148915.2420.7620.28pospos
904344.087.084.44negneg
PM 99061656.9444.6858.66pospos
915145.144.442.1negneg
PM 1074963-1.08-0.62-0.93negneg
972087.796.627.01pospos
PM 115476417.67.059.5negneg
5184314.4313.4718.54pospos
PM 1240908-4.04-1.52-1.7negneg
5160272.9252.0234.09pospos
PM 1331526-2.592-6.876-3.156negneg
3605545.9645.3645.12pospos
PM 1430337271.37257.5negneg
577071276.185611.11452pospos
PM 152910811.8810.3812.06negneg
9.368.587.26negneg
PM 1641731incompleteincompleteincompleteincompleteneg
78042incompleteincompleteincompleteincompleteneg
PM 1737638incompleteincompleteincompleteincompleteneg
55609incompleteincompleteincompleteincompleteneg
PM 1854174incompleteincompleteincompleteincompleteneg
43184incompleteincompleteincompleteincompleteneg

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