BME103:W930 Group1: Difference between revisions

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'''Polymerase Chain Reaction'''<br>
'''Polymerase Chain Reaction'''<br>
Polymerase Chain Reaction<br>
Polymerase Chain Reaction


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Revision as of 11:54, 31 October 2012

BME 103 Fall 2012 Home
People
Lab Write-Up 1
Lab Write-Up 2
Lab Write-Up 3
Course Logistics For Instructors
Photos
Wiki Editing Help

OUR TEAM

Name: Kevin Chu
Experimental Protocol Planner
Name: Michael Dennison
Experimental Protocol Planner
Name: Student
Role(s)
Name: Student
Role(s)
Name: Student
Role(s)

LAB 1 WRITE-UP

(Please finish by 11/7/2012)

Initial Machine Testing

The Original Design
(Add image of the full OpenPCR machine here, from the Week 3 exercise. Write a paragraph description for visitors who have no idea what this is)


Experimenting With the Connections

When we unplugged part (part 3) from (part 6), the machine ... (did what? fill in your answer)

When we unplugged the white wire that connects (part 6) to (part 2), the machine ... (did what? fill in your answer)


Test Run

(Write the date you first tested Open PCR and your experience(s) with the machine)




Protocols

Polymerase Chain Reaction

Polymerase Chain Reaction
Polymerase Chain Reaction

Reagent Volume
Template DNA (20 ng) 0.1μL
10μM forward primer 0.5μL
10μM reverse primer 0.5μL
GoTaq master mix 25.0μL
dH2O 23.9μL
Total Volume 50.0μL

Positive Control
Cancer DNA template

Negative Control
DNA Template

Patient 1
Replicate 1
ID: 92336
Gender: Male
Age: 58

Patient 1
Replicate 2
ID: 92336
Gender: Male
Age: 58

Patient 1
Replicate 3
ID: 92336
Gender: Male
Age: 58

Patient 2
Replicate 1
ID: 44606
Gender: Male
Age: 47

Patient 2
Replicate 2
ID: 44606
Gender: Male
Age: 47

Patient 2
Replicate 3
ID: 44606
Gender: Male
Age: 47



Flourimeter Measurements

(Add your work from Week 3, Part 2 here)




Research and Development

Specific Cancer Marker Detection - The Underlying Technology

(Add a write-up of the information discussed in Week 3's class)

(BONUS points: Use a program like Powerpoint, Word, Illustrator, Microsoft Paint, etc. to illustrate how primers bind to the cancer DNA template, and how Taq polymerases amplify the DNA. Screen-captures from the OpenPCR tutorial might be useful. Be sure to credit the source if you borrow images.)




Results

(Your group will add the results of your Fluorimeter measurements from Week 4 here)