BME103:W930 Group5 l2: Difference between revisions

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| [[Image:Andrea2012.jpg|100px|thumb|Name: Andrea Carpenter<br>Role(s): Experimental Protocol Planner]]
| [[Image:Andrea2012.jpg|100px|thumb|Name: Andrea Carpenter<br>Role(s): Experimental Protocol Planner]]
| [[Image:BME103student.jpg|100px|thumb|Name: Malik McLaurin<br>Role(s): Re-Design Engineer]]
| [[Image:BME103student.jpg|100px|thumb|Name: Malik McLaurin<br>Role(s): Open PCR Machine Engineer]]
| [[Image:BME103student.jpg|100px|thumb|Name: Dana McElwain<br>Role(s): Open PCR Machine Engineer]]
| [[Image:BME103student.jpg|100px|thumb|Name: Dana McElwain<br>Role(s): Open PCR Machine Engineer]]
| [[Image:BME103student.jpg|100px|thumb|Name: Student<br>Role(s)]]
| [[Image:BME103student.jpg|100px|thumb|Name: Student<br>Role(s)]]

Revision as of 19:12, 27 November 2012

BME 103 Fall 2012 Home
People
Lab Write-Up 1
Lab Write-Up 2
Lab Write-Up 3
Course Logistics For Instructors
Photos
Wiki Editing Help

OUR TEAM

Name: Andrea Carpenter
Role(s): Experimental Protocol Planner
Name: Malik McLaurin
Role(s): Open PCR Machine Engineer
Name: Dana McElwain
Role(s): Open PCR Machine Engineer
Name: Student
Role(s)
Name: Student
Role(s)

LAB 2 WRITE-UP

Thermal Cycler Engineering

Our re-design is based upon the Open PCR system originally designed by Josh Perfetto and Tito Jankowski.


System Design


Key Features


Instructions





Protocols

Materials

Supplied in Kit

Supplies Amount
Micro Test Tubes ?
Transfer Pipettes ?
PCR Master Mix 6 samples (598.8μL total)
Positive Control Solution* 1 sample (100.0μL***)
Negative Control Solution** 1 sample (100.0μL***)
PCR Machine 1
Fluorimeter 1

(*)Positive control consists of calf thymus DNA
(**)Negative control simply consists of a blank solution of water
(***)Already mixed with PCR master mix

Included in Fluorimeter Package:

Supplies Amount
Smart phone stand 1
LCD Box 1
Light box 1
Sybr green solution 500.0μL

Components of PCR master mix:

DNA Solution Component Amount
Patient’s Template DNA* 0.2μL
10μM forward primer 1.0μL
10μM reverse primer 1.0μL
Promega GoTaq master mix 50.0μL
dH2O 47.8μL
Total 100.0μL

(*)Not actually included in kit, but must be added to the master mix by the user.

Supplied by User

Supplies Amount
Smart Phone with Camera 1
Patient's Template DNA 6 samples (0.2μL each)
External Computer 1
Image J Software 1
Open PCR Software 1
Gloves 1 pair
Lab Coat 1


PCR Protocol



DNA Measurement Protocol

Research and Development

Background on Disease Markers



Primer Design



Illustration