BME103 s2013:T900 Group1 L2: Difference between revisions

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{| {{table}} width=700
{| {{table}} width=700
|-
|-
| row 1 cell 1 || row 1 cell 2 || row 1 cell 3 || row 1 cell 4 || row 1 cell 5
| Concentration || Integrated Density || Integrated Density of Background || Area of Circle || Mean Gray Value
|-
|-
| row 2 cell 1 || row 2 cell 2 || row 2 cell 3 || row 2 cell 4 || row 2 cell 5
|Water||213454||??||6691||31.902
|-
|-
| row 3 cell 1 || row 3 cell 2 || row 3 cell 3 || row 3 cell 4 || row 2 cell 5
|Water||93371||??||2422||38.551
|-
|Water||65949||??||1219||54.101
|-
|0.25||593913||??||7333||80.992
|-
|0.25||569386||??||6988||81.481
|-
|0.25||791593||??||8917||88.773
|-
|0.5||651140||??||7774||83.759
|-
|0.5||453045||??||5146||88.038
|-
|0.5||2142033||??||15458||138.571
|-
|1||2458883||??||12175||201.962
|-
|1||1836054||??||9380||195.741
|-
|1||2223630||??||11335||196.174
|-
|2||1721563||??||6868||250.664
|-
|2||3215604||??||12780||251.612
|-
|2||2577701||??||10205||252.592
|-
|5||3957423||??||15704||252.001
|-
|5||4194978||??||16748||250.476
|-
|5||5088859||??||20200||251.924
|-
 
|}
|}
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Revision as of 17:49, 1 April 2013

BME 103 Spring 2013 Home
People
Lab Write-Up 1
Lab Write-Up 2
Lab Write-Up 3
Course Logistics For Instructors
Photos
Wiki Editing Help


OUR TEAM

Kristi Norris:
Protocol Planner
Carlos Renteria:
Research and Design Specialist
Raul Monzolo:
Open PCR Machine Engineer
Johnny Montez:
Open PCR Machine Engineer
Robert Sanchez:
Research and Design Specialist
Group 1


LAB 2 WRITE-UP

Background Information

SYBR Green Dye
[A short summary describing SYBR green dye]


Single-Drop Fluorimeter
[A description of the single-drop fluorimeter device. Add a PHOTO for bonus points]


How the Fluorescence Technique Works
[In your own words, a summary of the information from page 9 of the worksheet]



Procedure

Smart Phone Camera Settings

  • [The type of smart phone you used and how you adjusted the camera settings, if applicable (see worksheet page 4).]
    • Flash:
    • ISO setting:
    • White Balance:
    • Exposure:
    • Saturation:
    • Contrast:
  • [If you used an additional phone, describe the other type of smart phone you used and how you adjusted the camera settings, if applicable (see worksheet page 4).]
    • Flash:
    • ISO setting:
    • White Balance:
    • Exposure:
    • Saturation:
    • Contrast:


Calibration

[Describe how to set up your camera in front of the fluorimeter. Add a PHOTO of this set-up for bonus points.]

  • Distance between the smart phone cradle and drop =

[See worksheet page 5]


Solutions Used for Calibration [See worksheet page 5]

row 1 cell 1 row 1 cell 2 row 1 cell 3 row 1 cell 4
row 2 cell 1 row 2 cell 2 row 2 cell 3 row 2 cell 4
row 3 cell 1 row 3 cell 2 row 3 cell 3 row 3 cell 4

[Add more rows as needed]


Placing Samples onto the Fluorimeter

  • [Step one, in your OWN words]
  • [Step two, in your own words]
  • [Step three, in your own words]
  • [etc.]


Data Analysis

Representative Images of Samples


Image J Values for All Samples [See worksheet page 5]

Concentration Integrated Density Integrated Density of Background Area of Circle Mean Gray Value
Water 213454 ?? 6691 31.902
Water 93371 ?? 2422 38.551
Water 65949 ?? 1219 54.101
0.25 593913 ?? 7333 80.992
0.25 569386 ?? 6988 81.481
0.25 791593 ?? 8917 88.773
0.5 651140 ?? 7774 83.759
0.5 453045 ?? 5146 88.038
0.5 2142033 ?? 15458 138.571
1 2458883 ?? 12175 201.962
1 1836054 ?? 9380 195.741
1 2223630 ?? 11335 196.174
2 1721563 ?? 6868 250.664
2 3215604 ?? 12780 251.612
2 2577701 ?? 10205 252.592
5 3957423 ?? 15704 252.001
5 4194978 ?? 16748 250.476
5 5088859 ?? 20200 251.924

[Add more rows as needed]


Fitting a Straight Line