Beauchamp:Lab Notebook

Beauchamp Lab

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1. How To Install Software and set up new computers
2. Notes on analyzing MRI data (old)

MRI

1. Overview of fMRI Analysis
2. Software Information Page
3. Motion and Distortion Correction
4. Autism Data
5. Finding Distances on the Surface
6. Finding Closest node on the Surface
7. Creating AFNI BRIKs from MR Data
8. Preparation for Creating Cortical Surface Models
9. Creating Cortical Surface Models
10. Using Cortical Surface Models
11. What If a Cortical Surface Model Exists Already
12. What If Cortical Surface Model Looks Bad
13. Creating Standardized Surface Models
14. FreeSurfer Standard Surface Models
15. Creating Volume Average Datasets with AFNI
16. Processing Diffusion Tensor Imaging Data
17. Automatic VOI Initialization for Interactive Tractography
18. Deterministic Tractography Constrained by Image Masks
19. AFNI
20. SUMA
21. Free Surfer
22. Caret
23. Scanner Stimulus and Eye Tracker Setup
24. Retinotopic Mapping
25. AFNI Atlas Values
26. Tactile Experiment Notes
27. MVPA Notes
28. RealTimefMRI
29. Electrode Localization and Naming

TMS/TMS+MRI

1. Notes on TMS

Electrophysiology

Electrophysiology Protocols

Analyzing ECoG data (by Adam Burch)

Psychophysics

New Auditory Tactile Experiment

d' (d-prime) Analysis

Race Model Analysis

Ordering

1. How To order things for the lab

McGurk Stimuli

McGurk Stimuli