Beauchamp:Lab Notebook
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How To Install Software and set up new computers How To order things for the lab How To Install Software and set up new computers Notes on analyzing MRI data (old) Electrophysiology Notes (old) Notes on TMS
MRI
- Overview of fMRI Analysis
- Software Information Page
- Motion and Distortion Correction
- Autism Data
- Finding Distances on the Surface
- Finding Closest node on the Surface
- Creating AFNI BRIKs from MR Data
- Preparation for Creating Cortical Surface Models
- Creating Cortical Surface Models
- Using Cortical Surface Models
- What If a Cortical Surface Model Exists Already
- What If Cortical Surface Model Looks Bad
- Creating Standardized Surface Models
- FreeSurfer Standard Surface Models
- Creating Volume Average Datasets with AFNI
- Processing Diffusion Tensor Imaging Data
- Automatic VOI Initialization for Interactive Tractography
- Deterministic Tractography Constrained by Image Masks
- AFNI
- SUMA
- Free Surfer
- Caret
- Scanner Stimulus and Eye Tracker Setup
- Retinotopic Mapping
- AFNI Atlas Values
- Tactile Experiment Notes
- MVPA Notes
- RealTimefMRI
- Electrode Localization and Naming
Electrophysiology
Analyzing ECoG data (by Adam Burch)
Psychophysics
New Auditory Tactile Experiment