Berk2006-Oligos
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Name | Description | Sequence |
---|---|---|
ca997F | EIPCR for Biobrick p15A/CmR plasmid | ctcgaGGATCCTGCAGctagaaatattttatctgatt |
ca998 | Forward Sequencing of pSB1A2 | gtatcacgaggcagaatttcag |
ca999 | Reverse sequencing of pSB1A2 (fails, don't use) | ccgtattaccgcctttgagtg |
2005iGEM1 | RlamFwd | caatcacgcgcaccccccggccgttttagcggctaaaaaagtcatgtgtaggctggagctgcttc |
2005iGEM2 | RlamRev | acagcagggaagcagcgcttttccgctgcataaccctgcttcgggatgggaattagccatggtcc |
2005iGEM3 | TraJ-F-Rev | TTAACGCGTATTTATGATACACATAGC |
2005iGEM4 | TraJ-F-For | ATGTATCCGATGGATCGTATTCAAC |
2005iGEM6 | FCtra-rev | CCATAGATATTCCCTGCCCTG |
2005iGEM7 | FCtra-fwd | CTCAGTCCTCATGTCTCCGG |
2005iGEM8 | OriTBackwardBB | CATTAGAGATTACCTTTTTTGAAC |
2005iGEM9 | oriTforwardF | AAGGCTCAACAGGTTGGTGGTTC |
2005iGEM10 | TraJF-BBFor | gcagcaGAATTCGCGGCCGCTTCTAGAGatgtatccgatggatcgtattcaac |
2005iGEM11 | TraJR-BBRev | CACGAACTGCAGCGGCCGCTACTAGTAtcatggctctgccctcg |
2005iGEM12 | TraJR-BBFor | gcagcaGAATTCGCGGCCGCTTCTAGAGatggctgatgaaaccaagcc |
2005iGEM13 | FTJiamR | CAGAAAAGACGGAAAGTCTATATTTTATTAACACCTTATTAACGCG ATGGGAATTAGCCATGGTCC |
2005iGEM14 | OriT-R-Rev | TTTTCCGCTGCATAACCCTGC |
2005iGEM15 | TraJ-R-For | ATGGCTGATGAAAGCAAGCC |
2005iGEM16 | TraJ-R-Rev | TCATGGCTCTGCCTCG |
2005iGEM17 | OriT-R-For | GCCGCCTTTTCCTCAATCG |
2005iGEM18 | FTJiamF | ggtgacagtacgaaagataattagtatattaattacgtggttaat gtgtaggctggagctgcttc |
2005iGEM19 | FORlamF | tttatccgtaaataatttaacccactccacaaaaaggctcaacag gtgtaggctggagctgcttc |
2005iGEM20 | FORlamR | ggaccatggctaattcccat ctctttatgatatttaaaaaagcggtgtcggcgcggctacaacaa |
2005iGEM21 | tabbR | CTGCAGCGGCCGCTACTAGTAATTATAG... |
2005iGEM22 | tabb1R | CTGCAGCGGCCGCTACTAGTATCTGCAG... |
2005iGEM23 | tabb2R | CTGCAGCGGCCGCTACTAGTAATAACGT... |
2005iGEM24 | crbb1R | CTGCAGCGGCCGCTACTAGTATCTCCTC... |
2005iGEM25 | crbb2R | CTGCAGCGGCCGCTACTAGTATCTCCTC... |
2005iGEM26 | tabb2F | GAATTCGCGGCCGCTTCTAGAGACCCAA... |
2005iGEM27 | crR12wBBR | AGCAGCCTGCAGCGGCCGCTACTAGTAG... |
2005iGEM28 | rrnBP1F | GCAGCAGAATTCGCGGCCGCTTCTAGAG... |
2005iGEM29 | crbb2F | GAATTCCGGCCGCTTCTAGAGAACTAG... |
2005iGEM30 | rrnBP1R | AGCAGCCTGCAGCGGCCGCTACTAGTAG... |
2005iGEM31 | crR12wBBF | GCAGCAGAATTCGCGGCCGCTTCTAGAG... |
2005iGEM32 | Vlad-fwd | ATACTCGAGATGGCGAGCAGTGAGGACA... |
2005iGEM33 | vlad-rev | ATAGAATTCTACAGGAAGAGGTGGTGG |
2005iGEM34 | crbb1F | GAATTCGCGGCCGCTTCTAGAGAACTAG... |
2005iGEM35 | tabbF | GAATTCGCGGCCGCTTCTAGAGAGAAAA... |
2005iGEM36 | tabbF | GAATTCGCGGCCGCTTCTAGAGACCCAA... |
2005iGEM37 | ChrrF | GCAGCAGAATTCGCGGCCGCTTCTAGAGATGACGATCCGGCACCATGT |
2005iGEM38 | ChrR Reverse | CACGAACTGCAGCGGCCGCTACTAGTATCAGATGCGGAAGAAGGGCT |
2005iGEM39 | Predreverse | TCGACTTCTGCAGCGGCCGCTACTAGTA... |
2005iGEM40 | RpoEreverse | TCGACTTCTGCAGCGGCCGCTACTAGTATCAACTCATATGCTGGCGCAGACG |
2005iGEM41 | gfp_r | GCGGCGAAGCTTTTCCATGCC |
2005iGEM42 | gfp_f1 | GCGGCGGGTACCCAGAACT |
2005iGEM43 | RpoEforward | CCTAGGAATTCGCGGCCGCTTCTAGAGGTGACGGACAAGAGTGACAGGAC |
2005iGEM44 | RpoEp1reverse | TCGACTTCTGCAGCGGCCGCTACTAGTACCGCCCGGAGGTGAAGATAG |
2005iGEM45 | RpoEp1forward | CCTAGGAATTCGCGGCCGCTTCTAGAGTTTTTCCCGCCTCCCGCCTG |
2005iGEM46 | spoIIEreverse | TCGACTTCTGCAGCGGCCGCTACTAGTATCCTCTCATCTCCCACCTGTTATAT |
2005iGEM47 | SpoIIEforward | CCTAGGAATTCGCGGCCGCTTCTAGAGCGGGTCATCCTAACAAATCGGTTTC |
2005iGEM48 | BPredForrward | CCTAGGAATTCGCGGCCGCTTCTAGAGATGGCGAGCAGTGAGGACATCATC |
ca1000 | Forward sequencing of pSB3C6 (pAC997) | cagggcagggtcgttaaatagc |
ca1001 | Reverse sequencing of pSB3C6 (pAC997) | ggcggttttttcgttttcagagc |
BBa_G00101 | Reverse sequencing of pSB1A* plasmids | attaccgcctttgagtgagc |
ca1002F | Forward EcoRI oligo to make XbaI blunter cassette | cttctggaattcgcggccgcaactagtgtccctatcag |
ca1002R | Reverse PstI oligo to make SpeI blunter cassette | gaagcctgcagcggccgctTctagAatataaacgcag |
ca994F | forward Xba1 library for Key3 | CCTATtctagaGACCCAAAAGCANGAGGNNNNNNTAGTNGGTGGTTAATGAAAATTAACTTACTTACTAG |
KB001 | Forward EcoRI to construct Ptet part-making biobrick plasmid | ttctggaattcgcggccgcaactagagccaggcatc |
KB002 | Reverse XbaI to construct Ptet part-making biobrick plasmid | ccgctTctagAagtgctcagtatc |
KB003 | Forward XbaI oligo for part3b | ctccatctagagACCCAAAAGCAAGAGGTGATTCTAGTTtac |
KB004 | Reverse PstI oligo for part3b | gcgaactgcagcggccgctactagtaAACTAGAATCACCTCTTG |
KB005 | Forward XbaI oligo for part 3c | ccatatctagagACCCAAAAGCAAGAGGTGATTCTAGTTggtggttaatgaaaattaacttacttactagaaat |
KB006 | Reverse PstI oligo for part 3c | catctctgcagcggccgctactagtaaagccggattaataatctggctttttagagatatttctagtaagtaagttaa |
KB007 | Forward XbaI oligo for part 3d | TctagAgcgggcgggcgggcgggcgggatccataaaaaaaaaACCCAAAAGCAAGAGGTGATTCTAGTTaaa |
KB008 | Reverse PstI oligo for part 3d | ctgcaggcggccgctactagtacgggcgggcgggcgggcgggaagctttttttttttAACTAGAATCACCTCTT |
JL1 | Forward EcoRI to make spectinomycin resistance biobrick | gacttgaattcgcggccgcttctagagtccaagcgagctcgatatc |
JL2 | Reverse SpeI to make spectinomycin resistance biobrick | ccgctactagtCAGCAACGATGTTACGCAGC |
JL3 | forward oligo to characterize oriTF/TraM region | gatggcattaacccggtaac |
JL4 | reverse oligo to characterize oriTF/TraM region+50bp | ctaattatctttcgtactgtc |
JL5 | Forward EcoRI oligo to bioBrick TraM | CCTAGGAATTCGCGGCCGCTTCTAGatggctaaggtgaacctgtatatcagc |
JL6 | Reverse SpeI oligo to bioBrick TraM | gacttACTAGTgtcaaatttcgtttattcatc |
JL7 | Reverse knockout oligo for oriT/traM | cataaaaactctgatatttgaacgaagtcaaatttcgtttATGGGAATTAGCCATGGTCC |
JL8 | Forward oligo to knockout traG-R | atgaagaaccgaaacaacgccgtggggccacagatacgggcgaaagtgCaggctggagctgcttcgaag |
JL9 | Reverse oligo to knockout traG-R | tcatatcgtgatcccctccccttcctcgacggtggccgtctggattgggaaGtagccatggtccatatg |
JL10 | Forward EcoRI oligo to bioBrick TraG *Internal NotI site | CCTAGGAATTCGCGGCCGCTTCTAGatgaagaaccgaaacaacgc |
JL11 | Reverse SpeI oligo to bioBrick TraG *internal NotI site | gacttACTAGTgaagcggctcatatcgtgatc |
JL12 | Forward oligo to knockout trbC |
atgaagctgagtatgaaatctctggcagcactgctgatgatgctggtgCaggctggagctgcttcgaag |
JL13 | Reverse oligo to knockout trbC | tcatttcccggaatctcctttccctgccagtaaatcatgagccactgggaaGtagccatggtccatatg |
JL14 | Forward EcoRI oligo to bioBrick trbC *internal PstI site | CCTAGGAATTCGCGGCCGCTTCTAGatgaagctgagtatgaaatc |
JL15 | Reverse SpeI oligo to bioBrick trbC *internal PstI site | gacttACTAGTcgtttcatttcccggaatctc |
KB009 | Forward Ptet screening oligo | tccctatcagtgatagagat |
KB010 | Forward Lock2 screening oligo | aactagaatcacctctagtg |
KB011 | Forward mRFP1 screening oligo | atggcttcctccgaagacgt |
KB012 | KB009 5' add on | CACTGTctagAgcgggcgggcgggc |
KB013 | KB010 3' add on | CCAAActgcaggcggccgctactag |
JL16 | Forward trbC 20mers | gctggcgttaccagatggtg |
JL17 | Reverse trbC 20mers | gccctgaatactgctgcttcc |
KB014 | Lock3 4 base add-on to 3' end of hairpin loop forward oligo | GTCGATCTAGAGAACTAGAATCACCTCTTGCTTTTGGGTAAGAC |
KB015 | Lock3 1 base add-on to 3' end of hairpin loop reverse oligo | CCGATCTGCAGCGGCCGCTACTAGTATCTCCTCTTGTCTTACCCAAAAGCAAGAG |
KB016 | Lock3 2 base add-on to 3' end of hairpin loop reverse oligo | CCGATCTGCAGCGGCCGCTACTAGTATCTCCTCTTCGTCTTACCCAAAAGCAAGAG |
KB017 | Lock3 4 base add-on to 3' end of hairpin loop reverse oligo | CCGATCTGCAGCGGCCGCTACTAGTATCTCCTCTTCTGTCTTACCCAAAAGCAAGAG |
KB018 | Lock3 one point mutation on the 5' end of the 3' homology region forward oligo | GTCGATCTAGAGAACTAGAATCAACTCTTGCTTTTGGGTAAGAAAGAGG |
KB019 | Lock3 one point mutation on the 5' end of the 3' homology region reverse oligo | CCGATCTGCAGCGGCCGCTACTAGTATCTCCTCTTTCTTACCCAAAAGC |
KB020 | Lock3 two consecutive point mutations on the 5' end of the 3' homology region forward oligo | GTCGATCTAGAGAACTAGAATCAATTCTTGCTTTTGGGTAAGAAAGAGG |
KB021 | Lock3 one point mutation on the 3' end of the 3' homology region forward oligo | GTCGATCTAGAGAACTAGAATCACCTCTAGCTTTTGGGTAAGAAAGAGG |
KB022 | Lock3 two consecutive point mutations on the 3' end of the 3' homology region forward oligo | GTCGATCTAGAGAACTAGAATCACCTCAAGCTTTTGGGTAAGAAAGAGG |
JL18 | Forward TraG 20mers | ctgattatgttggtgcgctg |
Jl19 | Reverse TraG 20mers | cattcgatttccagtacaggc |
JL20 | Forward BglII to BamHI for traG-5' knockout cassette | GAGTCAGATCTgattatgttggtgcgctg |
JL21 | Reverse MfeI to EcoRI for traG-5' knockout cassette | gctggCAATTGcattcgatttccagtacaggc |
JL22 | Reverse EcoRI IPCR of traG | gctgcGAATTCgatactggaaggaatgggc |
JL23 | Forward PstI IPCR of traG | cattgCTGCAGacggcagcattgaagaggcg |
ca850R | Reverse EcoRI for FRT-Kan-Frt at P1 | cacttGAATTCgtgtaggctggagctgcttc |
ca1025F | Mutagenesis of E0040 for GFP(S56AGGA) | gaaacagcatgactttttcaagAGGAgccatgcccgaaggttatgtac |
ca1025R | Mutagenesis of E0040 for GFP(S56AGGA) | gtacataaccttcgggcatggcTCCTcttgaaaaagtcatgctgtttc |
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