Berkeley iGEM10: Difference between revisions
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(New page: ==~~~~== EcoXho's for the first round of assembly (ecobammed into assembly vectors) 400px appropriate fragment lengths <pre> layout on ecoXho gel FRAGMENTS ...) |
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<pre> | <pre> | ||
layout on ecoXho gel FRAGMENTS | layout on ecoXho gel FRAGMENTS part size | ||
1 6-2 1307 1605 | 1 6-2 1307 1605 35 | ||
2 6-11 1318 1605 | 2 6-11 1318 1605 46 | ||
3 6-2 1307 1605 | 3 6-2 1307 1605 35 | ||
4 6-11 1318 1605 | 4 6-11 1318 1605 46 | ||
5 6-4 2703 1605 | 5 6-4 2703 1605 1431 | ||
6 6-12 1869 1605 | 6 6-12 1869 1605 597 | ||
7 6-4 2703 1605 | 7 6-4 2703 1605 1431 | ||
8 6-12 1869 1605 | 8 6-12 1869 1605 597 | ||
9 6-5 1513 1605 | 9 6-5 1513 1605 241 | ||
10 6-13 1671 1605 | 10 6-13 1671 1605 399 | ||
11 6-5 1513 1605 | 11 6-5 1513 1605 241 | ||
12 6-13 1671 1605 | 12 6-13 1671 1605 399 | ||
13 6-7 3060 1605 | 13 6-7 3060 1605 1788 | ||
14 6-19 1500 1605 | 14 6-19 1500 1605 228 | ||
15 6-7 3060 1605 | 15 6-7 3060 1605 1788 | ||
16 6-19 1500 1605 | 16 6-19 1500 1605 228 | ||
17 6-22 2298 1605 | 17 6-22 2298 1605 1026 | ||
18 7-9 1797 1680 | 18 7-9 1797 1680 597 | ||
19 6-22 2298 1605 | 19 6-22 2298 1605 1026 | ||
20 7-10 1300 1680 | 20 7-10 1300 1680 100 | ||
21 6-23 1363 1605 | 21 6-23 1363 1605 91 | ||
22 7-11 1246 1680 | 22 7-11 1246 1680 46 | ||
23 6-23 1363 1605 | 23 6-23 1363 1605 91 | ||
24 7-13 1599 1680 | 24 7-13 1599 1680 399 | ||
25 6-24 #N/A 1605 | 25 6-24 #N/A 1605 #N/A | ||
26 7-14 1599 1680 | 26 7-14 1599 1680 399 | ||
27 6-24 #N/A 1605 | 27 6-24 #N/A 1605 #N/A | ||
28 7-19 1428 1680 | 28 7-19 1428 1680 228 | ||
29 7-2 1235 1680 | 29 7-2 1235 1680 35 | ||
30 7-23 1291 1680 | 30 7-23 1291 1680 91 | ||
31 7-5 1441 1680 | 31 7-5 1441 1680 241 | ||
32 7-24 #N/A 1680 | 32 7-24 #N/A 1680 #N/A | ||
33 7-24 #N/A 1680 | 33 7-24 #N/A 1680 #N/A | ||
34 5-23 1291 1473 | 34 5-23 1291 1473 91 | ||
35 5-3 1233 1473 | 35 5-3 1233 1473 33 | ||
36 5-23 1291 1473 | 36 5-23 1291 1473 91 | ||
37 5-3 1233 1473 | 37 5-3 1233 1473 33 | ||
38 8-1 1307 1473 | 38 8-1 1307 1473 35 | ||
39 5-8 2444 1473 | 39 5-8 2444 1473 1244 | ||
40 8-1 1307 1473 | 40 8-1 1307 1473 35 | ||
41 5-8 2444 1473 | 41 5-8 2444 1473 1244 | ||
42 8-4 2703 1473 | 42 8-4 2703 1473 1431 | ||
43 5-15 1290 1473 | 43 5-15 1290 1473 90 | ||
44 8-4 2703 1473 | 44 8-4 2703 1473 1431 | ||
45 5-20 2023 1473 | 45 5-20 2023 1473 823 | ||
46 8-6 1591 1473 | 46 8-6 1591 1473 319 | ||
47 5-20 2023 1473 | 47 5-20 2023 1473 823 | ||
48 8-6 1591 1473 | 48 8-6 1591 1473 319 | ||
1 8-17 3117 1473 | 1 8-17 3117 1473 1845 | ||
2 4-10 1166 1679 | 2 4-10 1166 1679 100 | ||
3 8-17 3117 1473 | 3 8-17 3117 1473 1845 | ||
4 4-10 1166 1679 | 4 4-10 1166 1679 100 | ||
5 8-18 3090 1473 | 5 8-18 3090 1473 1818 | ||
6 4-16 1156 1679 | 6 4-16 1156 1679 90 | ||
7 8-18 3090 1473 | 7 8-18 3090 1473 1818 | ||
8 4-16 1156 1679 | 8 4-16 1156 1679 90 | ||
9 8-21 1504 1473 | 9 8-21 1504 1473 232 | ||
10 4-17 2911 1679 | 10 4-17 2911 1679 1845 | ||
11 8-21 1504 1473 | 11 8-21 1504 1473 232 | ||
12 4-17 2911 1679 | 12 4-17 2911 1679 1845 | ||
13 4-9 1663 1679 | 13 4-9 1663 1679 597 | ||
14 4-18 2884 1679 | 14 4-18 2884 1679 1818 | ||
15 4-9 1663 1679 | 15 4-9 1663 1679 597 | ||
16 4-18 2884 1679 | 16 4-18 2884 1679 1818 | ||
17 9-3 1099 1605 | 17 9-3 1099 1605 33 | ||
18 9-20 1889 1605 | 18 9-20 1889 1605 823 | ||
19 9-3 1099 1605 | 19 9-3 1099 1605 33 | ||
20 9-20 1889 1605 | 20 9-20 1889 1605 823 | ||
21 9-8 2310 1605 | 21 9-8 2310 1605 1244 | ||
22 9-23 1157 1605 | 22 9-23 1157 1605 91 | ||
23 9-8 2310 1605 | 23 9-8 2310 1605 1244 | ||
24 9-23 1157 1605 | 24 9-23 1157 1605 91 | ||
25 9-11 1112 1605 | 25 9-11 1112 1605 46 | ||
26 | 26 | ||
27 9-11 1112 1605 | 27 9-11 1112 1605 46 | ||
28 | 28 | ||
29 9-13 1465 1605 | 29 9-13 1465 1605 399 | ||
30 | 30 | ||
31 9-13 1465 1605 | 31 9-13 1465 1605 399 | ||
32 | 32 | ||
33 | 33 | ||
34 | 34 | ||
35 | 35 | ||
</pre> | </pre> |
Revision as of 16:59, 1 June 2010
Tim Hsiau 16:16, 1 June 2010 (EDT)
EcoXho's for the first round of assembly (ecobammed into assembly vectors)
appropriate fragment lengths
layout on ecoXho gel FRAGMENTS part size 1 6-2 1307 1605 35 2 6-11 1318 1605 46 3 6-2 1307 1605 35 4 6-11 1318 1605 46 5 6-4 2703 1605 1431 6 6-12 1869 1605 597 7 6-4 2703 1605 1431 8 6-12 1869 1605 597 9 6-5 1513 1605 241 10 6-13 1671 1605 399 11 6-5 1513 1605 241 12 6-13 1671 1605 399 13 6-7 3060 1605 1788 14 6-19 1500 1605 228 15 6-7 3060 1605 1788 16 6-19 1500 1605 228 17 6-22 2298 1605 1026 18 7-9 1797 1680 597 19 6-22 2298 1605 1026 20 7-10 1300 1680 100 21 6-23 1363 1605 91 22 7-11 1246 1680 46 23 6-23 1363 1605 91 24 7-13 1599 1680 399 25 6-24 #N/A 1605 #N/A 26 7-14 1599 1680 399 27 6-24 #N/A 1605 #N/A 28 7-19 1428 1680 228 29 7-2 1235 1680 35 30 7-23 1291 1680 91 31 7-5 1441 1680 241 32 7-24 #N/A 1680 #N/A 33 7-24 #N/A 1680 #N/A 34 5-23 1291 1473 91 35 5-3 1233 1473 33 36 5-23 1291 1473 91 37 5-3 1233 1473 33 38 8-1 1307 1473 35 39 5-8 2444 1473 1244 40 8-1 1307 1473 35 41 5-8 2444 1473 1244 42 8-4 2703 1473 1431 43 5-15 1290 1473 90 44 8-4 2703 1473 1431 45 5-20 2023 1473 823 46 8-6 1591 1473 319 47 5-20 2023 1473 823 48 8-6 1591 1473 319 1 8-17 3117 1473 1845 2 4-10 1166 1679 100 3 8-17 3117 1473 1845 4 4-10 1166 1679 100 5 8-18 3090 1473 1818 6 4-16 1156 1679 90 7 8-18 3090 1473 1818 8 4-16 1156 1679 90 9 8-21 1504 1473 232 10 4-17 2911 1679 1845 11 8-21 1504 1473 232 12 4-17 2911 1679 1845 13 4-9 1663 1679 597 14 4-18 2884 1679 1818 15 4-9 1663 1679 597 16 4-18 2884 1679 1818 17 9-3 1099 1605 33 18 9-20 1889 1605 823 19 9-3 1099 1605 33 20 9-20 1889 1605 823 21 9-8 2310 1605 1244 22 9-23 1157 1605 91 23 9-8 2310 1605 1244 24 9-23 1157 1605 91 25 9-11 1112 1605 46 26 27 9-11 1112 1605 46 28 29 9-13 1465 1605 399 30 31 9-13 1465 1605 399 32 33 34 35