BioMicroCenter:Multiplexed Sequencing: Difference between revisions

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(New page: {{BioMicroCenter}} == Multiplexed Sequencing == Multiplexed sequencing is a process of applying a "tag" to samples during sample preparation and thus allowing for multisample pooling w...)
 
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== Multiplexed Sequencing ==  
== Multiplexed Sequencing ==  


Multiplexed sequencing is a process of applying a "tag" to samples during sample preparation and thus allowing for multisample pooling within the same lane. This "tagging" allows for up to 12 samples to be run within a single lane or 96 samples per flowcell (including the control). The samples can then be differentiated during the pipeline analysis. This application can be useful when studying targeted genomic sub-regions or small genomes and can help to decrease the cost and time of sequencing. The kit provided by Illumina supplies 12 indexed 6bp oligos. For more information visit: http://www.illumina.com/downloads/SQ_Indexing_770-2008-011.pdf
Multiplexed sequencing is a process of applying a "tag" or "barcode" to samples during sample preparation, allowing up to 12 sampels  to be run in the same lane. The tags are read out as a second read following repriming using the [[PEM]]. The samples are differentiated during the pipeline analysis. This application can be useful when studying samples when you need less then 3-6 million reads per sample by helping to decrease the cost and time of sequencing.  
 
The kit provided by Illumina supplies 12 oligos containing unique barcodes 6nt in length in addition to the standard primers used for sequencing. For more information visit: http://www.illumina.com/downloads/SQ_Indexing_770-2008-011.pdf

Revision as of 14:04, 8 January 2009

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Multiplexed Sequencing

Multiplexed sequencing is a process of applying a "tag" or "barcode" to samples during sample preparation, allowing up to 12 sampels to be run in the same lane. The tags are read out as a second read following repriming using the PEM. The samples are differentiated during the pipeline analysis. This application can be useful when studying samples when you need less then 3-6 million reads per sample by helping to decrease the cost and time of sequencing.

The kit provided by Illumina supplies 12 oligos containing unique barcodes 6nt in length in addition to the standard primers used for sequencing. For more information visit: http://www.illumina.com/downloads/SQ_Indexing_770-2008-011.pdf