Biomod/2011/Caltech/DeoxyriboNucleicAwesome/References: Difference between revisions

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Baker, B. A., & Milam, V. T. . (2011). Hybridization kinetics between immobilized double-stranded dna probes and targets containing empedded recognition segments. Nucleic Acids Research, 1-13.
Bonnet, G., Krichevsky, O., & Libchaber, A. (1998). Kinetics of conformational fluctuations in dna haripin-loops. PNAS, 95, 8602-8606.
Dirks, R. M. , Lin, M., Winfree, E., & Pierce, N. A. (2004). Sensitive fluorescence-based thermodynamic and kinetic measurements of dna hybridization in solutions. Nucleic Acids Research, 32(4), 1392-1403.
Gu, H. , Chao, J., Xiao, S., & Seeman, N. C. (2010). A proximity-based programmable dna nanoscale assembly line. Nature, 465, 202-205.
Morrison, L. E. , & Stols, L. M. . (1993). Sensitive fluorescence-based thermodynamic and kinetic measurements of dna hybridization in solutions. Biochemestry, 32, 3095-3104.
Muscat, R. A. , Bath, J., & Tuberfield, A. J. (2011). A programmable molecular robot. Nano Letters, 11, 982-987.
SantaLucia, J. (1998). A unified view of polymer, dumbbell, and oligonucleotide dna nearest-neighbor thermodynamics. PNAS, 95, 1460-1465.
Wang, Z., Elbaz, J., Remacle, F., Levine, R. D., & Willner, I. (2010). All-dna finite-state automata with finite memory. PNAS, 107(51), 21996-22001.
Wickham, S. F. J., Endo, M., Katsuda, Y., Hidaka, K., Bath, J., Sugiyama, H., & Tuberfield, A. J. (2010). Direct observation of stepwise movement of a synthetic molecular transporter. Nature Nanotechnology, 6, 166–169.

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 *Baker, B. A., & Milam, V. T. . (2011). Hybridization kinetics between immobilized double-stranded dna probes and targets containing empedded recognition segments. ''Nucleic Acids Research,'' 1-13.
 *Bonnet, G., Krichevsky, O., & Libchaber, A. (1998). Kinetics of conformational fluctuations in dna haripin-loops. PNAS, 95, 8602-8606.
+*Dirks, R. M. , Lin, M., Winfree, E., & Pierce, N. A. (2004). Sensitive fluorescence-based thermodynamic and kinetic measurements of dna hybridization in solutions. Nucleic Acids Research, 32(4), 1392-1403.
 *Gu, H. , Chao, J., Xiao, S., & Seeman, N. C. (2010). A proximity-based programmable dna nanoscale assembly line. ''Nature, 465,'' 202-205.
 *Morrison, L. E. , & Stols, L. M. . (1993). Sensitive fluorescence-based thermodynamic and kinetic measurements of dna hybridization in solutions. ''Biochemestry, 32,'' 3095-3104.