Biomod/2012/Tianjin/Result/Origami: Difference between revisions

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<ul><li> <a href="#" title="#">Abstract</a>
<ul><li> <a href="http://openwetware.org/wiki/Biomod/2012/Tianjin/Result/LogicGate" title="LogicGate">The Logic Gate</a><div class="tianjin-description">Looking at this design, there are two critical problems regarding our design</div>
</li><li> <a href="http://openwetware.org/wiki/Biomod/2012/Tianjin/Result/LogicGate" title="LogicGate">The Logic Gate</a><div class="tianjin-description">Looking at this design, there are two critical problems regarding our design</div>
</li><li> <a href="http://openwetware.org/wiki/Biomod/2012/Tianjin/Result/YDNA" title="YDNA">Y-DNA</a><div class="tianjin-description">The Y-DNA was synthesized from three ssDNAs, each of which has partial complementary sequences to the other two ssDNAs.</div>
</li><li> <a href="http://openwetware.org/wiki/Biomod/2012/Tianjin/Result/YDNA" title="YDNA">Y-DNA</a><div class="tianjin-description">The Y-DNA was synthesized from three ssDNAs, each of which has partial complementary sequences to the other two ssDNAs.</div>
</li><li> <strong class="selflink">The Origami Amplifier</strong><div class="tianjin-description">In this design, we focus on two essential problems.</div>
</li><li> <strong class="selflink">The Origami Amplifier</strong><div class="tianjin-description">In this design, we focus on two essential problems.</div>

Revision as of 18:08, 27 October 2012

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<div id="header"> <div class="title" style="height: 180px;"> <a href="http://openwetware.org/wiki/Biomod/2012/Tianjin"><img src ="http://openwetware.org/images/7/79/TJU2012-Header.png"></a> <div style="float:right;"><img src="http://openwetware.org/images/c/cd/TJU2012-logo.png"></div> <div class="topsearch" style="position:absolute;top:175px;right:90px;"> <form method="GET" action="http://www.google.com/search"> <input type="hidden" name="hl" value="en"> <input type="hidden" name="sitesearch" value="openwetware.org"> <input type="hidden" name="domains" value="openwetware.org"> <input type="hidden" name="as_epq" value="Tianjin"> <input type="text" name="q" class="frm"><input type="submit" class="btn" value="Search"> </form> </div> </div> </div>

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  	    <li class='active '><a href='http://openwetware.org/wiki/Biomod/2012/Tianjin'><span>Home</span></a></li>
  	    <li class='active '><a href='http://openwetware.org/wiki/Biomod/2012/Tianjin/Team'><span>Team</span></a>
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  	    <li class='has-sub'><a href='http://openwetware.org/wiki/Biomod/2012/Tianjin/Project/Background'><span>Designs</span></a>
  	        <ul>
  	            <li><a href='http://openwetware.org/wiki/Biomod/2012/Tianjin/Project/Background'><span>Background</span></a></li>
               <li><a href='http://openwetware.org/wiki/Biomod/2012/Tianjin/Project/LogicGate'><span>The Logic Gate</span></a></li>
               <li><a href="http://openwetware.org/wiki/Biomod/2012/Tianjin/Project/YDNA"><span>Y-DNA</span></a></li>
               <li><a href="http://openwetware.org/wiki/Biomod/2012/Tianjin/Project/Origami"><span>The Origami Amplifier</span></a></li>
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  	            <li><a href='http://openwetware.org/wiki/Biomod/2012/Tianjin/Result/LogicGate'><span>The Logic Gate</span></a></li>
               <li><a href='http://openwetware.org/wiki/Biomod/2012/Tianjin/Result/YDNA'><span>Y-DNA</span></a></li>
               <li><a href='http://openwetware.org/wiki/Biomod/2012/Tianjin/Result/Origami'><span>The Origami Amplifier</span></a></li>

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<div id="tianjin-right-content"> <ul><li> <a href="http://openwetware.org/wiki/Biomod/2012/Tianjin/Result/LogicGate" title="LogicGate">The Logic Gate</a><div class="tianjin-description">Looking at this design, there are two critical problems regarding our design</div> </li><li> <a href="http://openwetware.org/wiki/Biomod/2012/Tianjin/Result/YDNA" title="YDNA">Y-DNA</a><div class="tianjin-description">The Y-DNA was synthesized from three ssDNAs, each of which has partial complementary sequences to the other two ssDNAs.</div> </li><li> <strong class="selflink">The Origami Amplifier</strong><div class="tianjin-description">In this design, we focus on two essential problems.</div> </li></ul> </div>

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<div id="outborder" style="background: #FAFAFA url(http://biomod.net/sites/all/themes/biomod/images/stripe.png) repeat; height:360px; width:640px; padding:10px;"> <div id="inborder" style="background: #fff;height:340px;width:620px;padding:10px;"> <a href="http://openwetware.org/index.php?title=Biomod/2012/Tianjin/Result/Origami&action=edit">this page edit</a> <div id="frametext"><br><br><span style="font-size:300%;">In</span> this design, we focus on two essential problems: 1. Is our design able to load cargo? 2. Is 8-17 DNAzyme still capable of multiple turnover in our new design? We subsequently answered the questions in the experiment.</div> <div id="frameimg"><img src="http://openwetware.org/images/9/92/TJU2012-frame-ROr.png"></div> </div> </div>

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Experiment & Results

  1. The staple strands and M13MP18 were annealed in PCR, and formed the origami container.
Figure 24'. Agarose electrophoresisgel of origami and M13. (From BIOMOD Team Tianjin 2012.)
Figure 24. The AFM image of the drug carrier. (From BIOMOD Team Tianjin 2012.)
  1. We verified the multiple turnover of 8-17 in the logic gate. In the solution, we added 5μM reporter and 1μM 8-17. From Figure X, we could notice that more than 1 uM substrate was cleaved, which represents the multiple turnover character.
Figure 25. Verification of multipleturnover of our DNAzyme.[substrate]=5μM, [logic gate]=1μM. (From BIOMOD Team Tianjin 2012.)

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