Biomod/2013/Aarhus/Supplementary/Supplementary Informations: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
Line 25: Line 25:


===Staple strands for the plate===
===Staple strands for the plate===
[[Image:Supp orig staples plate.png|frame|Table S12. staple strands for the plate]]
[[Image:Supp orig staples plate.png|center|frame|Table S12. staple strands for the plate]]




{{Biomod/2013/Aarhus/Nano Creators/endhax}}
{{Biomod/2013/Aarhus/Nano Creators/endhax}}
{{Biomod/2013/Aarhus/Nano_Creators/footer}}
{{Biomod/2013/Aarhus/Nano_Creators/footer}}

Revision as of 03:48, 25 October 2013

<html> <style> /* ul.menu li.</html>Supplementary/Supplementary_Informations<html> a { 

 color: cyan;

}

  • /
  1. toc {

display: none; }

  1. mytoc {

background: none; width: 200px; }

.toc { border: 0px solid; }

  1. toc ul ul,.toc ul ul {

margin: 0 0 0 1em; }

table.toc { background-color: #f0f4f4; }

  1. mytoc a,#mytoc a:visited {

font-size: normal; color: #222222; }

  1. mytoc a:hover {

font-color: #009ee0; /* text-decoration: underline; */ }

  1. wiki-toc {

width: 200px; margin-top: 6px; float: left; }

  1. wiki-body {

margin-left: 200px; padding-left: 12px; padding-right: 35px; }

  1. toc #toctitle,.toc #toctitle,#toc .toctitle,.toc .toctitle {

text-align: left; }

  1. toc h2,.toc h2 {

font-weight: normal; font-size: 17px; }

/*

  1. wiki-contents A {

color: #00aeef; }

  1. wiki-contents A:HOVER {

color: #00aeef; }

  • /
  1. toctitle span {

display: none; }

/*

  1. wiki-body p,#wiki-body li,#wiki-body dd,div.thumbcaption {

font-size: medium; }

  • /

/* required to avoid jumping */

  1. tocScrolWrapper {

/* left: 450px; */ position: absolute; /* margin-left: 35px; width: 280px; */ }

  1. tocScrol {

position: absolute; top: 0; /* just used to show how to include the margin in the effect */ /*margin-top: 20px; */ /* border-top: 1px solid purple; */ /*padding-top: 19px;*/ }

  1. tocScrol.fixed {

position: fixed; top: 0; }

  1. editPageTxt {

text-align: left; padding-left: 15px; }

  1. editPageTxt P {

clear: both; }

  1. toPageTop {

float: left; position: relative; top: 18px; left: 13px; color: #d13f31; } </style>

<script type="text/javascript"> $(document).ready(function() { var parentTable = $("#toc").parent(); $('#mytoc').append($("#toc").first());

$('#mytoc').find("#toc").attr("id", ""); parentTable.closest('table').remove(); });

$(document).ready( function() { var top = $('#tocScrol').offset().top - parseFloat($('#tocScrol').css('marginTop').replace( /auto/, 0)); var nav = $('#tocScrol'); var max = $('#indexing').offset().top - nav.height();

$(window).scroll(function(event) { // what the y position of the scroll is var y = $(this).scrollTop();

if (y > top) { // && signs are html decoded thus this construction if (y >= max) { nav.removeClass('fixed'); nav.css({ position : 'absolute', top : max - top }); } else { nav.addClass('fixed'); nav.removeAttr('style'); } } else { nav.removeClass('fixed'); nav.removeAttr('style'); } }); }); </script> <html> <html> <div id="wiki-contents"> <div id="tocScrolWrapper"> <div id="tocScrol"> <div id="wiki-toc"> <a id="toPageTop" href="#">&#x25B2;</a> <table id="mytoc" class="toc" summary="Contents"> </table> <div id="editPageTxt"> <p> [<a href="http://openwetware.org/index.php?title=Biomod/2013/Aarhus/</html>Supplementary/Supplementary_Informations<html>&action=edit">edit this page</a>] </p> </div> </div> </div> </div> <div id="wiki-body"> </html>

Supplementary informations

Sequence of sisiRNA

Fi. S54. Detailed structure and sequences of the sisiRNA. W179-C6amino and W004 comprises the sisiRNA sense strand and W376LNA-OH is the antisense strand. W181-C6amino shown topmost is the sense strand without the knick. Black colored letters marks nucleobases of RNA, blue colored letters marks nucleobases of DNA and purple is LNA marked by the prefix l. The orange uG is a guanine with an unlocked base.

pEGFPLuc vector information

Fig. S55. Vector map of pEGFPLuc vector. Derived from Clontech.

Staple strands for the connecting modifications

Table S7. Staple strands for dome-plate connectors.
Table S8. Staple strands for peptide lock with toehold.
Table S9. Staple strands for dome-peptide lock with zipper.
Table S10. Modified staple strands for attachment of sisiRNAs.

Staple strands for the dome

Fig. S56. staple strands for the dome
Table S11. Staple strands for the dome

Staple strands for the plate

Table S12. staple strands for the plate


<html></div></div></html> <html> <head> <style>

  1. indexing {

/* float: left; position: center; */ background-color: #222; border-top: 2px solid #d13f31; color: #006e9c; margin: 0px; padding: 0px 0px 10px 0px; width: 100%; text-align: center; }

.footer-section { padding: 10px; display: table-cell; text-align: left; }

.footer-section-title { font-size: 20px; }

  1. footer-contents {

color: #006e9c; display: inline-table; }

.footer-section A { color: #006e9c; text-decoration: none; }

.footer-section A:HOVER { color: #00aeef; }

.footer-section ul { list-style-type: square; }

  1. sitemapTitle {

margin-top: 20px; font-size: 24px; }

  1. editFooter {

float: right; margin-top: -28px; margin-right: 5px; }

  1. editFooter A {

color: #006e9c; text-decoration: none; }

.cf:before,.cf:after { content: " "; /* 1 */ display: table; /* 2 */ }

.cf:after { clear: both; }

  1. bodyContent a[href^="mailto:"], .link-mailto {
   background: url() no-repeat scroll right center transparent;
   padding-right: 0px;
   color: #006e9c;

}

</style> </head> <body> <div id="indexing"> <div id="sitemap"> <p id="sitemapTitle">SITEMAP | BIOMOD 2013 NANO CREATORS | Aarhus University</p> <div id="footer-contents"> <div class="footer-section"> <p class="footer-section-title">INTRODUCTION</p> <ul> <li><a href="/wiki/Biomod/2013/Aarhus">Home, abstract, animation and video</a></li> <li><a href="/wiki/Biomod/2013/Aarhus/Introduction">Introduction</a></li </ul> </div> <div class="footer-section"> <p class="footer-section-title">RESULTS AND DISCUSSION</p> <ul> <li><a href="/wiki/Biomod/2013/Aarhus/Results_And_Discussion/Origami">Origami</a></li> <li><a href="/wiki/Biomod/2013/Aarhus/Results_And_Discussion/Peptide_lock">Peptide lock</a></li> <li><a href="/wiki/Biomod/2013/Aarhus/Results_And_Discussion/Chemical_Modification">Chemical modification</a></li> <li><a href="/wiki/Biomod/2013/Aarhus/Results_And_Discussion/sisiRNA">sisiRNA</a></li> <li><a href="/wiki/Biomod/2013/Aarhus/Results_And_Discussion/System_In_Action">System in action</a></li> </ul> </div> <div class="footer-section"> <p class="footer-section-title">MATERIALS AND METHODS</p> <ul> <li><a href="/wiki/Biomod/2013/Aarhus/Materials_And_Methods/Origami">Origami</a></li> <li><a href="/wiki/Biomod/2013/Aarhus/Materials_And_Methods/Peptide_lock">Peptide lock</a></li> <li><a href="/wiki/Biomod/2013/Aarhus/Materials_And_Methods/Chemical_Modification">Chemical modification</a></li> <li><a href="/wiki/Biomod/2013/Aarhus/Materials_And_Methods/sisiRNA">sisiRNA</a></li> <li><a href="/wiki/Biomod/2013/Aarhus/Materials_And_Methods/System_In_Action">System in action</a></li> <li><a href="/wiki/Biomod/2013/Aarhus/Materials_And_Methods/Methods">Methods</a></li> </ul> </div> <div class="footer-section"> <p class="footer-section-title">SUPPLEMENTARY</p> <ul> <li><a href="/wiki/Biomod/2013/Aarhus/Supplementary/Team_And_Acknowledgments">Team and acknowledgments</a></li> <li><a href="/wiki/Biomod/2013/Aarhus/Supplementary/Optimizations">Optimizations</a></li> <li><a href="/wiki/Biomod/2013/Aarhus/Supplementary/Supplementary_Data">Supplementary data</a></li> 

                                               <li><a

href="/wiki/Biomod/2013/Aarhus/Supplementary/Supplementary_Informations">Supplementary informations</a> <li><a href="/wiki/Biomod/2013/Aarhus/Supplementary/References">References</a></li> </ul> </div> </div> <div> <p id="copyright">Copyright (C) 2013 | BIOMOD Team Nano Creators @ Aarhus University | Programming by: <a href="mailto:pvskaarup@gmail.com?Subject=BIOMOD 2013:">Peter Vium Skaarup</a>.</p> </div> </div>

<!-- Sponsers --> <div> <img alt="Sigma - Aldrich" src="http://openwetware.org/images/3/39/Sigmaaldrich-logo%28transparant%29.png" width="300px" height="154px"> <img alt="VWR International" src="http://openwetware.org/images/2/28/Vwr_logo.png" width="300px" height="61px"> <img alt="Promega" src="http://openwetware.org/images/7/72/Promega.png" width="175px" height="105px" style="padding-right: 5px; padding-left: 5px;"> <img alt="kem-en-tec" src="http://openwetware.org/images/3/3a/Kementec.png" width="130px" height="129px"> <img alt="Centre For Dna Nanotechnology" src="http://openwetware.org/images/4/4f/CDNA_logo.png" width="420px" height="90px"> <img alt="Dansk Tennis Fond" src="http://openwetware.org/images/9/9a/Dansk_tennis.png" width="250px" height="53px"> </div> <div id="editFooter"> [<a href="http://openwetware.org/index.php?title=Template:Biomod/2013/Aarhus/Nano_Creators/footer&action=edit">edit sitemap</a>] </div> </div> </body> </html>

Retrieved from "https://openwetware.org/mediawiki/index.php?title=Biomod/2013/Aarhus/Supplementary/Supplementary_Informations&oldid=744859"