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<td width="180" bgcolor="#000000">[[Biomod/2014/Kansai|<font face="Comic Sans MS,cursive,Arial" color="white">Top</font>]] </td>
<td width="180" bgcolor="#FFFFFF">[[Biomod/2014/Kansai/Team|<font face="Comic Sans MS,cursive,Arial" color="black">Team</font>]] </td>
<td width="180" bgcolor="#000000">[[Biomod/2014/Kansai/Project|<font face="Comic Sans MS,cursive,Arial" color="white">Project</font>]] </td>
<td width="180" bgcolor="#FFFFFF">[[Biomod/2014/Kansai/Results|<font face="Comic Sans MS,cursive,Arial" color="black">Design</font>]] </td>
<td width="180" bgcolor="#000000">[[Biomod/2014/Kansai/Etc.|<font face="Comic Sans MS,cursive,Arial" color="white">Sources</font>]] </td>
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<td width="180" bgcolor="#FFFFFF">[[Biomod/2014/Kansai/Protocols|<font face="Comic Sans MS,cursive,Arial" color="black">Experiment</font>]] </td>
<td width="180" bgcolor="#000000">[[Biomod/2014/Kansai/Experiment|<font face="Comic Sans MS,cursive,Arial" color="white">Further experiment</font>]] </td>
<td width="180" bgcolor="#FFFFFF">[[Biomod/2014/Kansai/New sources|<font face="Comic Sans MS,cursive,Arial" color="black">Future plan</font>]] </td>
<td width="180" bgcolor="#000000">[[Biomod/2014/Kansai/Sources|<font face="Comic Sans MS,cursive,Arial" color="white">protocol</font>]] </td>
<td width="180" bgcolor="#FFFFFF">[[Biomod/2014/Kansai/sponser|<font face="Comic Sans MS,cursive,Arial" color="black">Sponser</font>]] </td>
 
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WELCOME TO TEAM KANSAI!!!
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=Abstract=
 
<div style="text-align:justify;">
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　Deoxyribonucleic acid (DNA) is greatly useful materials for a building block in constructing extremely
small structure. DNA origami is constructed by combining complementary chains between a long cyclic
DNA strand (Scaffold DNA) and more 200 kinds of short strands (Staple DNA). It had been reported various
nanostructures made of DNA origami such as smile mark and a star mark. Also it had been reported a DNA
origami which is represented a character. But the quantity had not much. So, we tried to increase the amount
of visually information. We focused on QR code that is one kind of two-dimensional code. It is possible to
accommodate the large amount of data in a small space, and to accommodate not only numbers but also
the language data such as English. Interestingly, QR code is read in a camera Apps. And it can read a little
wrong QR code. In order to express it in nano size scale, we utilize height difference of DNA origami structure.
Therefore, we used a dumbbell hairpin. It gives height to DNA origami structure. Reading its structure in an
AFM, nano QR code may be represented. We will design DNA origami by modifying dumbbell hairpins in the
form of the QR code. If camera App can read the figure of nano QR code made of the origami, our project
will be complete! This will be a new information medium.
 
</div>
</p>
<br><br>
 
=Movie=


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Team Name: Team Kansai<br>
<head>
Institution Name: Kansai University<br>
<title></title>
Geographic Location: Osaka, Japan
</head>
<body>
<p>
<span style="font-family:trebuchet ms,helvetica,sans-serif;"><span style="font-size: 16px;"><strong>Greetings!</strong></span></span></p>
<p>
<span style="font-size:14px;"><span style="font-family: trebuchet ms,helvetica,sans-serif;">The NanoUANL team presents a model for synthesis of silver nanoparticle with specific dimensions within a viral capsid, using a semi-continuous tank reactor model  and single-enzyme confined kinetics. We also expand on the importance of mathematics in nanoscale design, and the limitations of computer analysis.</span></span></p>
<p>
&nbsp;</p>
<p>
<span style="font-family:trebuchet ms,helvetica,sans-serif;"><span style="font-size: 16px;"><strong>Summary</strong></span></span></p>
<p>
<span style="font-size:14px;"><span style="font-family: trebuchet ms,helvetica,sans-serif;">An empty modified viral capsid, from the plant virus CCMV, was used as a container for horseradish peroxidase. Pores along the container permit only small molecules/particles to enter and exit the container, and flow is affected by an interior negative charge. Enzymatic activity with H202 releases electrons, which are accepted by silver ions in the solution. These ions are deposited when they are reduced from Ag (I) to Ag (0), and begin to nucleate, forming a nanoparticle within the inside of the container.</span></span></p>
<p>
&nbsp;</p>
<p>
<span style="font-family:trebuchet ms,helvetica,sans-serif;"><span style="font-size: 16px;"><strong>Conclusion</strong></span></span></p>
<p>
<span style="font-size:14px;"><span style="font-family: trebuchet ms,helvetica,sans-serif;">We succeded at modeling the nanoreactor, and were able to describe the diffusion through the pores of the capsid, and accumulation of the product on the interior.</span></span></p>
<p>
&nbsp;</p>
<p style="text-align: center;">
<img alt="" height="90" src="http://openwetware.org/images/3/32/UANLHomeFCFM.jpg" width="92" /><span _fck_bookmark="1" style="display: none;">&nbsp;</span><img alt="" height="92" src="http://openwetware.org/images/9/9e/UANLHomeFCQ.jpg" width="94" /><span _fck_bookmark="1" style="display: none;">&nbsp;</span><span style="font-size:14px;"><span style="font-family: trebuchet ms,helvetica,sans-serif;"><img alt="" height="91" src="http://openwetware.org/images/9/97/UANLHomeFCB.jpg" width="91" /></span></span></p>
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Latest revision as of 21:24, 20 August 2015










Top Team Project Design Sources

Experiment Further experiment Future plan protocol Sponser

top


WELCOME TO TEAM KANSAI!!!

Abstract

　Deoxyribonucleic acid (DNA) is greatly useful materials for a building block in constructing extremely small structure. DNA origami is constructed by combining complementary chains between a long cyclic DNA strand (Scaffold DNA) and more 200 kinds of short strands (Staple DNA). It had been reported various nanostructures made of DNA origami such as smile mark and a star mark. Also it had been reported a DNA origami which is represented a character. But the quantity had not much. So, we tried to increase the amount of visually information. We focused on QR code that is one kind of two-dimensional code. It is possible to accommodate the large amount of data in a small space, and to accommodate not only numbers but also the language data such as English. Interestingly, QR code is read in a camera Apps. And it can read a little wrong QR code. In order to express it in nano size scale, we utilize height difference of DNA origami structure. Therefore, we used a dumbbell hairpin. It gives height to DNA origami structure. Reading its structure in an AFM, nano QR code may be represented. We will design DNA origami by modifying dumbbell hairpins in the form of the QR code. If camera App can read the figure of nano QR code made of the origami, our project will be complete! This will be a new information medium.



Movie


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<iframe width="560" height="315" src="//www.youtube.com/embed/un-O7yRS8bk" frameborder="0" allowfullscreen></iframe>


Team Name: Team Kansai
Institution Name: Kansai University
Geographic Location: Osaka, Japan

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