Biophysics: Difference between revisions

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[[image:BioPhysicsUA.jpg|920px]]
'''Welcome to the Biophysics Lab at Uniandes'''
 
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<h3>Professors</h3>
<h3>Professors</h3>


&bull; [[User:xxxx|Chad Leidy]], Physics Department<BR>
&bull; [[User:Manu Forero-Shelton|Manu Forero-Shelton]], Department of Physics (anforero)<BR>
&bull; [[User:xx|Manu Forero]], Physics Department<BR>
&bull; [[User:Juan M. Pedraza|Juan Manuel Pedraza]], Department of Physics (jmpedraza)<BR>
&bull; [[User:Juan M. Pedraza|Juan M. Pedraza]], Physics Department<BR>
 
<h3>Position Open</h3>
&bull; [http://fisica.uniandes.edu.co/images/Documentos/150827_Biophysics_Faculty_position_Area_biofisica.pdf Professor position Open!] <BR>
&bull; [http://fisica.uniandes.edu.co/images/Documentos/Convocatorias_/Posdoctoral_Position_Open_Biofsica_.pdf Postdoctoral Position Open !] <BR>
 
<h3>Former Professors</h3>
 
&bull; [[User:Chad Leidy|Chad Leidy]], UCDavis, Lab Founder <BR>
&bull; Ramón Fayad, Universidad Nacional - Group Founder <BR>
 
<h3>Lab. Manager</h3> &bull; [[User:Maria Isabel Perez|María Isabel Perez]], Lab. Manager <BR>
 
<h3>Postdoctoral Researcher</h3>
&bull; [[User:Ciaran Alexander Smyth|Ciaran Alexander Smyth]], PhD in Physical Chemistry<BR>
 
<h3>Students</h3>
 
<h3>Ph.D. Students</h3>
 
&bull; [[User:Jorge Luis Sanchez Ruiz|Jorge Luis Sánchez-Ruiz]], Soft Condensed Matter, Physics<BR>
&bull; [[User:Elizabeth Suesca|Elizabeth Suesca]], Physics<BR>
&bull; [[User:Nathaly Marin-Medina|Nathaly Marín-Medina]], Physics<BR>
&bull; [[User:Juan Carlos Arias Castro|Juan Carlos Arias-Castro]], Physics<BR>
&bull; [[User:Susana Simancas G.|Susana Simancas]], Biological Sciences<BR>
&bull; [[User:Juliana Sandoval Navia|Juliana Sandoval]], Physics<BR>
&bull; [[User:Cesar Nieto|César Nieto]], Physics<BR>
 
<h3>Master´s Students</h3>
 
&bull; [[User:Jorge Madrid Wolff|Jorge Madrid Wolff]], Physics<BR>
&bull; [[User:Manuela Vanegas-Ferro|Manuela Vanegas Ferro]], Biology and Microbiology<BR>
&bull; [[User:Rudy M. Mendez|Rudy Marcela Méndez]], Physics<br>
&bull; [[User:David Camilo Duran Ch|David Camilo Durán-Chaparro]], Physics<BR>
&bull; [[User:Lina Contreras|Lina Contreras]], Biological Sciences<BR>
&bull; [[User:Juan David Orjuela Zuniga|Juan David Orjuela]], Physics<BR>
&bull; [[User:Jorge Luis Romero|Jorge Luis Romero-Becerra]], Biological Sciences<BR>
 
 
 
<h3>Undergraduate Students</h3>
 
&bull; [[User:Nathalie Agudelo|Nathalie Agudelo]], Physics and Biology<BR>
&bull; [[User:Juan Estupinan-Mendez|Juan David Estupiñán Mendez]], Physics and Biology<BR>
&bull; [[User:Roberto Moran Tovar|Roberto Moran]], Physics<BR>
&bull; [[User:Cesar A. Quintana|César Quintana]], Physics and Microbiology<BR>
&bull; [[User:Nancy Ruiz Uribe|Nancy Ruiz Uribe]], Physics and Biology<BR>
&bull; [[User:Valentina Quiroga-Fonseca|Valentina Quiroga-Fonseca]],Physics<BR>
&bull; [[User:Luis_A._Gutierrez-Lopez|Luis Alberto Gutiérrez López]],Physics<BR>
&bull; [[User:Carlos A. Sanchez|Carlos Arturo Sánchez Isaza]],Physics and Microbiology<BR>


<h3>Research Assistant</h3>


<h2>Researchers</h2>
&bull; [[User:Sofia Alfonso-Sanchez|Sofia Alfonso-Sanchez]], Junior researcher<BR>
&bull; [[User:xxxx|xx xxxx]],Graduate Student, Microbiology Department<BR>
&bull; [[User:xx|xx xx]], Graduate Student, Physics Department<BR>


<h2>Students</h2>
<h3>External Students</h3>
&bull; xxx, Visting Professor


<h2>Past Members</h2>


<br>Maier Avendaño, Graduate Student at Harvard Systems Bio


<h3>Past Lab Members</h3>


&bull; [[User:Daniel Felipe Otálora|Daniel Felipe Otálora]], Biological Sciences <BR>
&bull; Cristian Medina, Undergrad student<BR>
&bull; Silvia Cañas, Master student [http://sysbiophd.harvard.edu/people/2014/silvia-johana-canas-duarte]<BR>
&bull; Gerson Cote, Undergrad student <BR>
&bull; Juanita Lara, Undergrad student [http://yin.hms.harvard.edu/people.html]<BR>
&bull; Mólkary López, Master student<BR>
&bull; Iván Rey, Master student & lab Manager<BR>
&bull; Luis Alejandro Mahecha, Master student<BR>
&bull; Alejandro Otero, Undergrad student<BR>
&bull; Diego Alejandro Ramírez, Master student<Br>
&bull; Paula Santisteban, Master student<BR>
&bull; Andrés Tibabuzo, Undergrad student<BR>
&bull; Nicolás Afanador, Master student<BR>
&bull; José Luis Alejo Amaya, Undergrad student<BR>
&bull; Maier Avendaño], Undergrad student [http://yin.hms.harvard.edu/people/avendano.maier/index.html]<BR>
&bull; Andrés Ernesto Mejía Villamil,Undergrad student <BR>
&bull; Jackson Ocampo, Undergrad student & lab Manager<BR>
&bull; Carola Hernández, Master student<Br>
&bull; Martínez-Gálvez, Undergrad student<BR>
&bull; Samuel Ramírez, Master stduent<Br>
&bull; Dilia E. Rangel, Master student<BR>
&bull; Natalia Rodríguez, Undergrad student<BR>
&bull; Andrés Felipe Valderrama, Undergrad student<BR>
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<h3>Collaborators</h3>
 
&bull; [http://openwetware.org/wiki/Paulsson Paulsson Lab], [http://paulsson.med.harvard.edu/ Harvard Univeristy]<br>
&bull; [http://pilizotalab.bio.ed.ac.uk/ Pilizota Lab], The University of Edinburgh<br>
&bull; [http://www.elkarouilab.org/ Elkaroui lab], The University of Edinburgh <br>
&bull; Gabriel Téllez, [http://fimaco.uniandes.edu.co/ Condensed Matter] - Uniandes<BR>
&bull; Andrés González Mancera, Mechanical Engineering - Uniandes<BR>
&bull; John Mario González, Medical School - Uniandes<BR>
&bull; Silvia Restrepo, LAMFU Lab - Uniandes<BR>
&bull; Jenny Dussan, CIMIC Lab - Uniandes<BR>
&bull; Juan A. Sánchez, Biommar Lab - Uniandes<BR>
&bull; Marcela Manrique, Chemistry - Universidad de Antioquia<BR>
&bull; Gilles Pieffet, Science Department - Universidad Antonio Nariño
 
 
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<h3>Position Open</h3>
&bull; [http://fisica.uniandes.edu.co/images/Documentos/150827_Biophysics_Faculty_position_Area_biofisica.pdf Professor position Open!] <BR>
&bull; [http://fisica.uniandes.edu.co/images/Documentos/Convocatorias_/Posdoctoral_Position_Open_Biofsica_.pdf Postdoctoral Position Open !] <BR>
 
<h2>Systems Biology</h2>
&bull; [[UA Biophysics:Members|SySBio Members]]<br>
&bull; [[UA Biophysics:Systems Biology|Summary]]/[[UA Biophysics:Biologia de Sistemas|Resumen]]<br>
&bull; [[UA Biophysics:Stochasticity|Stochasticity in gene expression and signaling]]<br>
&bull; [[UA Biophysics:Phenotypic variability|Phenotypic variability as survival strategy]]<br>
&bull; [[UA Biophysics:Feedback control|Control in synthetic genetic circuits]]<br>
&bull; [[UA Biophysics:Cooperation|Evolution of cooperation ]]<br>
&bull; [[UA Biophysics:SysBio Meeting|SysBio Meeting]]<br>
<!--&bull; [http://Biophysics.private.openwetware.org/ Private Wiki]-->
 
<h2>Cell Mechanics and Adhesion, Microscopy</h2>
&bull; [[UA Biophysics:Molecular Mechanics|Summary]]/[[UA Biophysics:Fuerzas Moleculares|Resumen]]<br>
&bull; [[UA Biophysics:Biofilms|Cell mechanics and adhesion, biofilms]]<br>
&bull; [[UA Biophysics:Immunity|The Mechanics of immunity]]<br>
&bull; [[UA Biophysics:Microscopy|Microscopy]]<br>
&bull; [[UA Biophysics:Education|Education and teaching]]<br>
[[image:UABioPhysics_Manu.jpg|250px]]
 
<h2>Membrane Biophysics</h2>
 
&bull; [[UA Biophysics: Membrane Members|Membrane Biophysics Members]]<br>
&bull; [[UA Biophysics: Mebrane Biophysics|Summary]]/[[UA Biophysics:Mebrane Biophysics|Resumen]]<br>
&bull; [[UA Biophysics:Liposome|Liposome catchment processes by tumor origin cell lines]]<br>
&bull; [[UA Biophysics:Membrane fluctuation |Membrane fluctuation analysis in giant unilamelar vesicles]]<br>
&bull; [[UA Biophysics:Study of survival|Study of survival strategies of S. aureus biofilms exposed to membrane-active antimicrobial peptides ]]<br>
&bull; [[UA Biophysics:Molecular dynamics|Molecular dynamics of membranes to study their mechanical properties]]<br>
[[Image:JD.jpg|250px]]
 


<h2>In the lab</h2>  
<h2>In the lab</h2>  
&bull; [[UA Biophysics:Projects|Projects]]<br>
&bull; [https://www.quartzy.com '''Quartzy''']<br>
&bull; [[UA Biophysics:Protocols|Protocols]]<br>
&bull; [[UA Biophysics:Protocols|Protocols]]<br>
&bull; [[UA Biophysics:Inventory|Inventory]]<br>
&bull; [[UA Biophysics:Strains|Strains]]<br>
&bull; [[UA Biophysics:Group Meeting|Group Meeting]]<br>
&bull; [[UA Biophysics:Safety|Safety]]<br>
&bull; [[UA Biophysics:Equipment|Equipment]]<br>
&bull; [[UA Biophysics:Equipment|Equipment]]<br>
&bull; [[UA Biophysics:Microscopes|Microscopes]]<br>
&bull; [[UA Biophysics:Microscopes|Microscopes]]<br>
&bull; [http://paulsson.private.openwetware.org/ Private Wiki]
&bull; [[UA Biophysics:Group Meeting|Group Meetings]]<br>
&bull; [[UA Biophysics:Software|Software]]<br>
 
<h2>iGEM</h2>
&bull; [http://2015.igem.org/Team:Uniandes_Colombia iGEM 2015], [https://twitter.com/colombia_igem1 twitter]<BR>
&bull; [http://2013.igem.org/Team:Colombia_Uniandes iGEM 2013]<br>
&bull; [http://www.uniandes.edu.co/tag/igem Uniandes news about iGEM 2012]<br>
&bull; [http://www.eltiempo.com/archivo/documento/CMS-10595064 Local news about iGEM 2011]<br>
 
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<h2>Resources</h2>
<h2>Join us!</h2>
&bull; [[UA Biophysics:Guide|Guide to new members]]<br>
&bull; [[UA Biophysics:New students|Prospective Students]]<br>
&bull; [[UA Biophysics:References|References]]<br>
&bull; [[UA Biophysics:New researchers|Prospective Researchers]]<br>
&bull; [[UA Biophysics:Journal Watch|Journal Watch]]<br>
 
&bull; [[UA Biophysics:Top 100|Top 100]]<br>
<h2>Address</h2>
&bull; [[UA Biophysics:Links|Links]]<br>
LABORATORIO DE BIOFÍSICA<BR>
&bull; [[UA Biophysics:Facts|Facts of Life]]<br>
Edificio Q<br>
&bull; [[UA Biophysics:Wiki primer|Wiki info]]<br>
Laboratorio Q-401<BR>
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Departamento de Física<BR>
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Universidad de los Andes<BR>
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Carrera 1 N° 18A - 12<br>
Bogotá, COLOMBIA<BR>
Tel: (+571) 3394949<BR>
biofisica@uniandes.edu.co
 
<h2>Webpages</h2>
&bull; [http://biofisica.uniandes.edu.co/ Official website ]<br>
In maintenance (Since April 2015)<br>
&bull; [http://fisica.uniandes.edu.co/en/ Department of Physics (En)]<br>
&bull; [http://fisica.uniandes.edu.co/ Departamento de Física (Es)]<br>
&bull; [http://www.uniandes.edu.co/component/content/article/656-about-uniandes University of the Andes (En)]<br>
&bull; [http://www.uniandes.edu.co/ Universidad de los Andes (Es)]<br>
&bull; [https://twitter.com/biophysuniandes Official Twitter account]


<h2>Contact Us</h2>
Biophysics Laboratory<BR>
Physics Department<BR>
University of the Andes<BR>
Carrera 1 N° 18A - 12 Bogotá, Colombia<BR>
Tel: +571 3394949 - +571 3394999<BR>


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<br>Photo credits: [[User:Nathaly Marin-Medina|Nathaly Marín-Medina]]. July 2015. View from Q building at Uniandes. Bogota.
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Thanks to [http://openwetware.org/wiki/Main_Page OpenWetWare] for hosting.
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Revision as of 08:51, 13 June 2016

Professors

• Manu Forero-Shelton, Department of Physics (anforero)
• Juan Manuel Pedraza, Department of Physics (jmpedraza)

Position Open

• Professor position Open!
• Postdoctoral Position Open !

Former Professors

• Chad Leidy, UCDavis, Lab Founder
• Ramón Fayad, Universidad Nacional - Group Founder

Lab. Manager

• María Isabel Perez, Lab. Manager

Postdoctoral Researcher

• Ciaran Alexander Smyth, PhD in Physical Chemistry

Students

Ph.D. Students

• Jorge Luis Sánchez-Ruiz, Soft Condensed Matter, Physics
• Elizabeth Suesca, Physics
• Nathaly Marín-Medina, Physics
• Juan Carlos Arias-Castro, Physics
• Susana Simancas, Biological Sciences
• Juliana Sandoval, Physics
• César Nieto, Physics

Master´s Students

• Jorge Madrid Wolff, Physics
• Manuela Vanegas Ferro, Biology and Microbiology
• Rudy Marcela Méndez, Physics
• David Camilo Durán-Chaparro, Physics
• Lina Contreras, Biological Sciences
• Juan David Orjuela, Physics
• Jorge Luis Romero-Becerra, Biological Sciences


Undergraduate Students

• Nathalie Agudelo, Physics and Biology
• Juan David Estupiñán Mendez, Physics and Biology
• Roberto Moran, Physics
• César Quintana, Physics and Microbiology
• Nancy Ruiz Uribe, Physics and Biology
• Valentina Quiroga-Fonseca,Physics
• Luis Alberto Gutiérrez López,Physics
• Carlos Arturo Sánchez Isaza,Physics and Microbiology

Research Assistant

• Sofia Alfonso-Sanchez, Junior researcher

External Students


Past Lab Members

• Daniel Felipe Otálora, Biological Sciences
• Cristian Medina, Undergrad student
• Silvia Cañas, Master student [1]
• Gerson Cote, Undergrad student
• Juanita Lara, Undergrad student [2]
• Mólkary López, Master student
• Iván Rey, Master student & lab Manager
• Luis Alejandro Mahecha, Master student
• Alejandro Otero, Undergrad student
• Diego Alejandro Ramírez, Master student
• Paula Santisteban, Master student
• Andrés Tibabuzo, Undergrad student
• Nicolás Afanador, Master student
• José Luis Alejo Amaya, Undergrad student
• Maier Avendaño], Undergrad student [3]
• Andrés Ernesto Mejía Villamil,Undergrad student
• Jackson Ocampo, Undergrad student & lab Manager
• Carola Hernández, Master student
• Martínez-Gálvez, Undergrad student
• Samuel Ramírez, Master stduent
• Dilia E. Rangel, Master student
• Natalia Rodríguez, Undergrad student
• Andrés Felipe Valderrama, Undergrad student

Collaborators

• Paulsson Lab, Harvard Univeristy
• Pilizota Lab, The University of Edinburgh
• Elkaroui lab, The University of Edinburgh
• Gabriel Téllez, Condensed Matter - Uniandes
• Andrés González Mancera, Mechanical Engineering - Uniandes
• John Mario González, Medical School - Uniandes
• Silvia Restrepo, LAMFU Lab - Uniandes
• Jenny Dussan, CIMIC Lab - Uniandes
• Juan A. Sánchez, Biommar Lab - Uniandes
• Marcela Manrique, Chemistry - Universidad de Antioquia
• Gilles Pieffet, Science Department - Universidad Antonio Nariño


Position Open

• Professor position Open!
• Postdoctoral Position Open !

Systems Biology

• SySBio Members
• Summary/Resumen
• Stochasticity in gene expression and signaling
• Phenotypic variability as survival strategy
• Control in synthetic genetic circuits
• Evolution of cooperation
• SysBio Meeting

Cell Mechanics and Adhesion, Microscopy

• Summary/Resumen
• Cell mechanics and adhesion, biofilms
• The Mechanics of immunity
• Microscopy
• Education and teaching

Membrane Biophysics

• Membrane Biophysics Members
• Summary/Resumen
• Liposome catchment processes by tumor origin cell lines
• Membrane fluctuation analysis in giant unilamelar vesicles
• Study of survival strategies of S. aureus biofilms exposed to membrane-active antimicrobial peptides
• Molecular dynamics of membranes to study their mechanical properties


In the lab

• Quartzy
• Protocols
• Equipment
• Microscopes
• Group Meetings
• Software

iGEM

• iGEM 2015, twitter
• iGEM 2013
• Uniandes news about iGEM 2012
• Local news about iGEM 2011

Join us!

• Prospective Students
• Prospective Researchers

Address

LABORATORIO DE BIOFÍSICA
Edificio Q
Laboratorio Q-401
Departamento de Física
Universidad de los Andes
Carrera 1 N° 18A - 12
Bogotá, COLOMBIA
Tel: (+571) 3394949
biofisica@uniandes.edu.co

Webpages

• Official website
In maintenance (Since April 2015)
• Department of Physics (En)
• Departamento de Física (Es)
• University of the Andes (En)
• Universidad de los Andes (Es)
• Official Twitter account



Photo credits: Nathaly Marín-Medina. July 2015. View from Q building at Uniandes. Bogota.

Thanks to OpenWetWare for hosting.

Retrieved from "https://openwetware.org/mediawiki/index.php?title=Biophysics&oldid=943032"