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[[image:BioPhysicsUA.jpg|920px]]
'''Welcome to the Biophysics Lab at Uniandes'''
 
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<h3>Professors</h3>
<h3>Professors</h3>


&bull; [[User:xxxx|Chad Leidy]], Physics Department<BR>
&bull; [[User:Manu Forero-Shelton|Manu Forero-Shelton]], Department of Physics (anforero)<BR>
&bull; [[User:Manu Forero-Shelton|Manu Forero]], Physics Department<BR>
&bull; [[User:Juan M. Pedraza|Juan Manuel Pedraza]], Department of Physics (jmpedraza)<BR>
&bull; [[User:Juan M. Pedraza|Juan M. Pedraza]], Physics Department<BR>
 
<h3>Position Open</h3>
&bull; [http://fisica.uniandes.edu.co/images/Documentos/150827_Biophysics_Faculty_position_Area_biofisica.pdf Professor position Open!] <BR>
&bull; [http://fisica.uniandes.edu.co/images/Documentos/Convocatorias_/Posdoctoral_Position_Open_Biofsica_.pdf Postdoctoral Position Open !] <BR>
 
<h3>Former Professors</h3>
 
&bull; [[User:Chad Leidy|Chad Leidy]], UCDavis, Lab Founder <BR>
&bull; Ramón Fayad, Universidad Nacional - Group Founder <BR>
 
<h3>Lab. Manager</h3> &bull; [[User:Maria Isabel Perez|María Isabel Perez]], Lab. Manager <BR>
 
<h3>Postdoctoral Researcher</h3>
&bull; [[User:Ciaran Alexander Smyth|Ciaran Alexander Smyth]], PhD in Physical Chemistry<BR>
 
<h3>Students</h3>
 
<h3>Ph.D. Students</h3>
 
&bull; [[User:Jorge Luis Sanchez Ruiz|Jorge Luis Sánchez-Ruiz]], Soft Condensed Matter, Physics<BR>
&bull; [[User:Elizabeth Suesca|Elizabeth Suesca]], Physics<BR>
&bull; [[User:Nathaly Marin-Medina|Nathaly Marín-Medina]], Physics<BR>
&bull; [[User:Juan Carlos Arias Castro|Juan Carlos Arias-Castro]], Physics<BR>
&bull; [[User:Susana Simancas G.|Susana Simancas]], Biological Sciences<BR>
&bull; [[User:Juliana Sandoval Navia|Juliana Sandoval]], Physics<BR>
&bull; [[User:Cesar Nieto|César Nieto]], Physics<BR>
 
<h3>Master´s Students</h3>
 
&bull; [[User:Jorge Madrid Wolff|Jorge Madrid Wolff]], Physics<BR>
&bull; [[User:Manuela Vanegas-Ferro|Manuela Vanegas Ferro]], Biology and Microbiology<BR>
&bull; [[User:Rudy M. Mendez|Rudy Marcela Méndez]], Physics<br>
&bull; [[User:David Camilo Duran Ch|David Camilo Durán-Chaparro]], Physics<BR>
&bull; [[User:Lina Contreras|Lina Contreras]], Biological Sciences<BR>
&bull; [[User:Juan David Orjuela Zuniga|Juan David Orjuela]], Physics<BR>
&bull; [[User:Jorge Luis Romero|Jorge Luis Romero-Becerra]], Biological Sciences<BR>
 


<h2>Researchers</h2>
&bull; [[User:Hector Jackson Ocampo Ariza|Jackson Ocampo]], Lab. technician & Researcher, Physics Department<BR>
&bull; [[User:Nicolás Afanador Cubillos|Nicolás Afanador]], Researcher, Physics Department<BR>
&bull; [[User:Andres Ernesto Mejia Villamil |Andres Ernesto Mejia]], Researcher, Physics Department<BR>
&bull; [[User:Natalia Rodriguez Arenas |Natalia Rodriguez]], Researcher, Physics Department<BR>


<h2>Senior Graduate Students</h2>
<h3>Undergraduate Students</h3>
&bull; [[User:Ivan A. Rey-Suarez|Ivan Adolfo Rey Suarez]], Physics Department<BR>
&bull; [[User:Jose Luis Alejo Amaya |Jose Luis Alejo Amaya ]], Physics Department<BR>
&bull; [[User:Diego Alejandro Ramirez Diaz |Diego Alejandro Ramirez Diaz]], Physics Department<BR>
&bull; [[User:Nathaly Melina Marin Medina|Nathaly Melina Marin Medina]], Physics Department<BR>
&bull; [[User:Dilia E. Rangel|Dilia E. Rangel]], Physics Department<BR>
&bull; [[User:Elizabeth Suesca Sanchez|Elizabeth Suesca Sanchez]], Physics Department<BR>


<h2>New Graduate Students</h2>
&bull; [[User:Nathalie Agudelo|Nathalie Agudelo]], Physics and Biology<BR>
&bull; [[User:Juan Estupinan-Mendez|Juan David Estupiñán Mendez]], Physics and Biology<BR>
&bull; [[User:Roberto Moran Tovar|Roberto Moran]], Physics<BR>
&bull; [[User:Cesar A. Quintana|César Quintana]], Physics and Microbiology<BR>
&bull; [[User:Nancy Ruiz Uribe|Nancy Ruiz Uribe]], Physics and Biology<BR>
&bull; [[User:Valentina Quiroga-Fonseca|Valentina Quiroga-Fonseca]],Physics<BR>
&bull; [[User:Luis_A._Gutierrez-Lopez|Luis Alberto Gutiérrez López]],Physics<BR>
&bull; [[User:Carlos A. Sanchez|Carlos Arturo Sánchez Isaza]],Physics and Microbiology<BR>


&bull; [[User:Julian Giraldo |Julian Giraldo ]], Physics Department<BR>
<h3>Research Assistant</h3>
&bull; [[User:Manuel Florez|Manuel Florez]], Physics Department<BR>
&bull; [[User:Paula Santisteban|Paula Santisteban]], Physics Department<BR>
&bull; [[User:Luis Alejandro Mahecha Gonzalez|Luis Alejandro Mahecha Gonzalez]], Physics Department<BR>
&bull; [[User: Molkary Lopez  |Molkary Lopez ]], Physics Department<BR>


&bull; [[User:Sofia Alfonso-Sanchez|Sofia Alfonso-Sanchez]], Junior researcher<BR>


<h2>Undergraduate Students and volunteers</h2>
<h3>External Students</h3>
&bull; [[User:David Camilo Duran Ch|David Camilo Duran Chaparro]]<BR>
&bull; [[User:Alexandra Pinto C.|Alexandra Pinto Castellanos ]]<BR>
&bull; [[User:Jorge Luis Romero Becerra |Jorge Luis Romero Becerra ]]<BR>
&bull; [[User:Andres Felipe Valderrama Aguilera|Andres Felipe Valderrama Aguilera]]<BR>
&bull; [[User:Susana Marcela Simancas Giraldo|Susana Marcela Simancas Giraldo]]<BR>




<h2>Past Members</h2>


<br>Maier Avendaño, Graduate Student at Harvard Systems Biology
<h3>Past Lab Members</h3>


&bull; [[User:Daniel Felipe Otálora|Daniel Felipe Otálora]], Biological Sciences <BR>
&bull; Cristian Medina, Undergrad student<BR>
&bull; Silvia Cañas, Master student [http://sysbiophd.harvard.edu/people/2014/silvia-johana-canas-duarte]<BR>
&bull; Gerson Cote, Undergrad student <BR>
&bull; Juanita Lara, Undergrad student [http://yin.hms.harvard.edu/people.html]<BR>
&bull; Mólkary López, Master student<BR>
&bull; Iván Rey, Master student & lab Manager<BR>
&bull; Luis Alejandro Mahecha, Master student<BR>
&bull; Alejandro Otero, Undergrad student<BR>
&bull; Diego Alejandro Ramírez, Master student<Br>
&bull; Paula Santisteban, Master student<BR>
&bull; Andrés Tibabuzo, Undergrad student<BR>
&bull; Nicolás Afanador, Master student<BR>
&bull; José Luis Alejo Amaya, Undergrad student<BR>
&bull; Maier Avendaño], Undergrad student [http://yin.hms.harvard.edu/people/avendano.maier/index.html]<BR>
&bull; Andrés Ernesto Mejía Villamil,Undergrad student <BR>
&bull; Jackson Ocampo, Undergrad student & lab Manager<BR>
&bull; Carola Hernández, Master student<Br>
&bull; Martínez-Gálvez, Undergrad student<BR>
&bull; Samuel Ramírez, Master stduent<Br>
&bull; Dilia E. Rangel, Master student<BR>
&bull; Natalia Rodríguez, Undergrad student<BR>
&bull; Andrés Felipe Valderrama, Undergrad student<BR>
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<h3>Collaborators</h3>
 
&bull; [http://openwetware.org/wiki/Paulsson Paulsson Lab], [http://paulsson.med.harvard.edu/ Harvard Univeristy]<br>
&bull; [http://pilizotalab.bio.ed.ac.uk/ Pilizota Lab], The University of Edinburgh<br>
&bull; [http://www.elkarouilab.org/ Elkaroui lab], The University of Edinburgh <br>
&bull; Gabriel Téllez, [http://fimaco.uniandes.edu.co/ Condensed Matter] - Uniandes<BR>
&bull; Andrés González Mancera, Mechanical Engineering - Uniandes<BR>
&bull; John Mario González, Medical School - Uniandes<BR>
&bull; Silvia Restrepo, LAMFU Lab - Uniandes<BR>
&bull; Jenny Dussan, CIMIC Lab - Uniandes<BR>
&bull; Juan A. Sánchez, Biommar Lab - Uniandes<BR>
&bull; Marcela Manrique, Chemistry - Universidad de Antioquia<BR>
&bull; Gilles Pieffet, Science Department - Universidad Antonio Nariño
 
 
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<h3>Position Open</h3>
&bull; [http://fisica.uniandes.edu.co/images/Documentos/150827_Biophysics_Faculty_position_Area_biofisica.pdf Professor position Open!] <BR>
&bull; [http://fisica.uniandes.edu.co/images/Documentos/Convocatorias_/Posdoctoral_Position_Open_Biofsica_.pdf Postdoctoral Position Open !] <BR>


<h2>Systems Biology</h2>  
<h2>Systems Biology</h2>  
&bull; [[UA Biophysics:Members|SySBio Members]]<br>
&bull; [[UA Biophysics:Systems Biology|Summary]]/[[UA Biophysics:Biologia de Sistemas|Resumen]]<br>
&bull; [[UA Biophysics:Systems Biology|Summary]]/[[UA Biophysics:Biologia de Sistemas|Resumen]]<br>
&bull; [[UA Biophysics:SB Project 1|Project 1]]<br>
&bull; [[UA Biophysics:Stochasticity|Stochasticity in gene expression and signaling]]<br>
&bull; [[UA Biophysics:SB Project 2|Project 2]]<br>
&bull; [[UA Biophysics:Phenotypic variability|Phenotypic variability as survival strategy]]<br>
&bull; [[UA Biophysics:SB Project 3|Project 3]]<br>
&bull; [[UA Biophysics:Feedback control|Control in synthetic genetic circuits]]<br>
&bull; [[UA Biophysics:Cooperation|Evolution of cooperation ]]<br>
&bull; [[UA Biophysics:SysBio Meeting|SysBio Meeting]]<br>
<!--&bull; [http://Biophysics.private.openwetware.org/ Private Wiki]-->


<h2>Molecular Mechanics</h2>  
<h2>Cell Mechanics and Adhesion, Microscopy</h2>  
&bull; [[UA Biophysics:Molecular Mechanics|Summary]]/[[UA Biophysics:Fuerzas Moleculares|Resumen]]<br>
&bull; [[UA Biophysics:Molecular Mechanics|Summary]]/[[UA Biophysics:Fuerzas Moleculares|Resumen]]<br>
&bull; [[UA Biophysics:MM Project 1|Project 1]]<br>
&bull; [[UA Biophysics:Biofilms|Cell mechanics and adhesion, biofilms]]<br>
&bull; [[UA Biophysics:MM Project 2|Project 2]]<br>
&bull; [[UA Biophysics:Immunity|The Mechanics of immunity]]<br>
&bull; [[UA Biophysics:MM Project 3|Project 3]]<br>
&bull; [[UA Biophysics:Microscopy|Microscopy]]<br>
&bull; [[UA Biophysics:Education|Education and teaching]]<br>
[[image:UABioPhysics_Manu.jpg|250px]]


<h2>Membrane Biophysics</h2>  
<h2>Membrane Biophysics</h2>  
&bull; [[UA Biophysics:Membrane Dynamics|Summary]]/[[UA Biophysics:Biomembranas|Resumen]]<br>
&bull; [[UA Biophysics:MD Project 1|Project 1]]<br>
&bull; [[UA Biophysics:MD Project 2|Project 2]]<br>
&bull; [[UA Biophysics:MD Project 3|Project 3]]<br>


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&bull; [[UA Biophysics: Membrane Members|Membrane Biophysics Members]]<br>
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&bull; [[UA Biophysics: Mebrane Biophysics|Summary]]/[[UA Biophysics:Mebrane Biophysics|Resumen]]<br>
<div style="clear: right; text-align: left; float: left; padding: .4em .9em .9em">
&bull; [[UA Biophysics:Liposome|Liposome catchment processes by tumor origin cell lines]]<br>
&bull; [[UA Biophysics:Membrane fluctuation |Membrane fluctuation analysis in giant unilamelar vesicles]]<br>
&bull; [[UA Biophysics:Study of survival|Study of survival strategies of S. aureus biofilms exposed to membrane-active antimicrobial peptides ]]<br>
&bull; [[UA Biophysics:Molecular dynamics|Molecular dynamics of membranes to study their mechanical properties]]<br>
[[Image:JD.jpg|250px]]
 


<h2>In the lab</h2>  
<h2>In the lab</h2>  
&bull; [https://www.quartzy.com '''Quartzy''']<br>
&bull; [[UA Biophysics:Protocols|Protocols]]<br>
&bull; [[UA Biophysics:Protocols|Protocols]]<br>
&bull; [[UA Biophysics:Inventory|Inventory]]<br>
&bull; [[UA Biophysics:Strains|Strains]]<br>
&bull; [[UA Biophysics:Group Meeting|Group Meeting]]<br>
&bull; [[UA Biophysics:Safety|Safety]]<br>
&bull; [[UA Biophysics:Equipment|Equipment]]<br>
&bull; [[UA Biophysics:Equipment|Equipment]]<br>
&bull; [[UA Biophysics:Microscopes|Microscopes]]<br>
&bull; [[UA Biophysics:Microscopes|Microscopes]]<br>
&bull; [http://paulsson.private.openwetware.org/ Private Wiki]
&bull; [[UA Biophysics:Group Meeting|Group Meetings]]<br>
&bull; [[UA Biophysics:Software|Software]]<br>
 
<h2>iGEM</h2>
&bull; [http://2015.igem.org/Team:Uniandes_Colombia iGEM 2015], [https://twitter.com/colombia_igem1 twitter]<BR>
&bull; [http://2013.igem.org/Team:Colombia_Uniandes iGEM 2013]<br>
&bull; [http://www.uniandes.edu.co/tag/igem Uniandes news about iGEM 2012]<br>
&bull; [http://www.eltiempo.com/archivo/documento/CMS-10595064 Local news about iGEM 2011]<br>


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<h2>Resources</h2>
&bull; [[UA Biophysics:Guide|Guide to new members]]<br>
&bull; [[UA Biophysics:References|References]]<br>
&bull; [[UA Biophysics:Journal Watch|Journal Watch]]<br>
&bull; [[UA Biophysics:Top 100|Top 100]]<br>
&bull; [[UA Biophysics:Links|Links]]<br>
&bull; [[UA Biophysics:Facts|Facts of Life]]<br>
&bull; [[UA Biophysics:Financial Resources|Financial Resources]]<br>
&bull; [[UA Biophysics:Wiki primer|Wiki info]]<br>


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Official Webpage:<br>
http://biofisica.uniandes.edu.co/


<h2>Join us!</h2>
<h2>Join us!</h2>
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&bull; [[UA Biophysics:New researchers|Prospective Researchers]]<br>
&bull; [[UA Biophysics:New researchers|Prospective Researchers]]<br>


<h2>Contact Us</h2>
<h2>Address</h2>
Biophysics Laboratory<BR>
LABORATORIO DE BIOFÍSICA<BR>
Physics Department<BR>
Edificio Q<br>
Q building - Labs Q-401 and Q-505<BR>
Laboratorio Q-401<BR>
University of the Andes<BR>
Departamento de Física<BR>
Carrera 1 N° 18A - 12 Bogotá, Colombia<BR>  
Universidad de los Andes<BR>
Tel: +571 3394949 - +571 3394999<BR>
Carrera 1 N° 18A - 12<br>
Bogotá, COLOMBIA<BR>  
Tel: (+571) 3394949<BR>
biofisica@uniandes.edu.co
 
<h2>Webpages</h2>
&bull; [http://biofisica.uniandes.edu.co/ Official website ]<br>
In maintenance (Since April 2015)<br>
&bull; [http://fisica.uniandes.edu.co/en/ Department of Physics (En)]<br>
&bull; [http://fisica.uniandes.edu.co/ Departamento de Física (Es)]<br>
&bull; [http://www.uniandes.edu.co/component/content/article/656-about-uniandes University of the Andes (En)]<br>
&bull; [http://www.uniandes.edu.co/ Universidad de los Andes (Es)]<br>
&bull; [https://twitter.com/biophysuniandes Official Twitter account]
 


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<br>Photo credits: [[User:Nathaly Marin-Medina|Nathaly Marín-Medina]]. July 2015. View from Q building at Uniandes. Bogota.
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Thanks to [http://openwetware.org/wiki/Main_Page OpenWetWare] for hosting.
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Revision as of 08:51, 13 June 2016

Professors

Manu Forero-Shelton, Department of Physics (anforero)
Juan Manuel Pedraza, Department of Physics (jmpedraza)

Position Open

Professor position Open!
Postdoctoral Position Open !

Former Professors

Chad Leidy, UCDavis, Lab Founder
• Ramón Fayad, Universidad Nacional - Group Founder

Lab. Manager

María Isabel Perez, Lab. Manager

Postdoctoral Researcher

Ciaran Alexander Smyth, PhD in Physical Chemistry

Students

Ph.D. Students

Jorge Luis Sánchez-Ruiz, Soft Condensed Matter, Physics
Elizabeth Suesca, Physics
Nathaly Marín-Medina, Physics
Juan Carlos Arias-Castro, Physics
Susana Simancas, Biological Sciences
Juliana Sandoval, Physics
César Nieto, Physics

Master´s Students

Jorge Madrid Wolff, Physics
Manuela Vanegas Ferro, Biology and Microbiology
Rudy Marcela Méndez, Physics
David Camilo Durán-Chaparro, Physics
Lina Contreras, Biological Sciences
Juan David Orjuela, Physics
Jorge Luis Romero-Becerra, Biological Sciences


Undergraduate Students

Nathalie Agudelo, Physics and Biology
Juan David Estupiñán Mendez, Physics and Biology
Roberto Moran, Physics
César Quintana, Physics and Microbiology
Nancy Ruiz Uribe, Physics and Biology
Valentina Quiroga-Fonseca,Physics
Luis Alberto Gutiérrez López,Physics
Carlos Arturo Sánchez Isaza,Physics and Microbiology

Research Assistant

Sofia Alfonso-Sanchez, Junior researcher

External Students


Past Lab Members

Daniel Felipe Otálora, Biological Sciences
• Cristian Medina, Undergrad student
• Silvia Cañas, Master student [1]
• Gerson Cote, Undergrad student
• Juanita Lara, Undergrad student [2]
• Mólkary López, Master student
• Iván Rey, Master student & lab Manager
• Luis Alejandro Mahecha, Master student
• Alejandro Otero, Undergrad student
• Diego Alejandro Ramírez, Master student
• Paula Santisteban, Master student
• Andrés Tibabuzo, Undergrad student
• Nicolás Afanador, Master student
• José Luis Alejo Amaya, Undergrad student
• Maier Avendaño], Undergrad student [3]
• Andrés Ernesto Mejía Villamil,Undergrad student
• Jackson Ocampo, Undergrad student & lab Manager
• Carola Hernández, Master student
• Martínez-Gálvez, Undergrad student
• Samuel Ramírez, Master stduent
• Dilia E. Rangel, Master student
• Natalia Rodríguez, Undergrad student
• Andrés Felipe Valderrama, Undergrad student

Collaborators

Paulsson Lab, Harvard Univeristy
Pilizota Lab, The University of Edinburgh
Elkaroui lab, The University of Edinburgh
• Gabriel Téllez, Condensed Matter - Uniandes
• Andrés González Mancera, Mechanical Engineering - Uniandes
• John Mario González, Medical School - Uniandes
• Silvia Restrepo, LAMFU Lab - Uniandes
• Jenny Dussan, CIMIC Lab - Uniandes
• Juan A. Sánchez, Biommar Lab - Uniandes
• Marcela Manrique, Chemistry - Universidad de Antioquia
• Gilles Pieffet, Science Department - Universidad Antonio Nariño


Position Open

Professor position Open!
Postdoctoral Position Open !

Systems Biology

SySBio Members
Summary/Resumen
Stochasticity in gene expression and signaling
Phenotypic variability as survival strategy
Control in synthetic genetic circuits
Evolution of cooperation
SysBio Meeting

Cell Mechanics and Adhesion, Microscopy

Summary/Resumen
Cell mechanics and adhesion, biofilms
The Mechanics of immunity
Microscopy
Education and teaching

Membrane Biophysics

Membrane Biophysics Members
Summary/Resumen
Liposome catchment processes by tumor origin cell lines
Membrane fluctuation analysis in giant unilamelar vesicles
Study of survival strategies of S. aureus biofilms exposed to membrane-active antimicrobial peptides
Molecular dynamics of membranes to study their mechanical properties


In the lab

Quartzy
Protocols
Equipment
Microscopes
Group Meetings
Software

iGEM

iGEM 2015, twitter
iGEM 2013
Uniandes news about iGEM 2012
Local news about iGEM 2011


Join us!

Prospective Students
Prospective Researchers

Address

LABORATORIO DE BIOFÍSICA
Edificio Q
Laboratorio Q-401
Departamento de Física
Universidad de los Andes
Carrera 1 N° 18A - 12
Bogotá, COLOMBIA
Tel: (+571) 3394949
biofisica@uniandes.edu.co

Webpages

Official website
In maintenance (Since April 2015)
Department of Physics (En)
Departamento de Física (Es)
University of the Andes (En)
Universidad de los Andes (Es)
Official Twitter account



Photo credits: Nathaly Marín-Medina. July 2015. View from Q building at Uniandes. Bogota.

Thanks to OpenWetWare for hosting.