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| == Yoonhee Kim, M.P.H, Ph.D. == | | == '''Yoonhee Kim, M.P.H, Ph.D.''' == |
| kimyoo@mail.nih.gov
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| Research fellow
| | == RESEARCH INTEREST == |
| Inherited Disease Research Branch
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| National Human Genome Research Institute (NHGRI)
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| National Institutes of Health (NIH)
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| 333 Cassell Drive Suite 1200
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| Baltimore, MD 21224
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| | Statistical Genetics, Genetic Epidemiology, Clinical trials, |
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| EDUCATION
| | Next Generation Sequencing data analysis, GenexGene Interaction analysis using Machine Learning Methods (Random Forests) |
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| | == EDUCATION == |
| 2008 Ph.D. Biostatistics and Epidemiology, School of Public Health, Seoul National University
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| 2005-2008 Pre-doctoral training at National Human Genome Research Institute, National Institutes of Health, USA
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| 2003 M.P.H. Biostatistcs and Epidemiology, School of Public Health, Seoul National University
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| 2001 B.S. in Statistics and B.S. in Biology, Ewha Womens University
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| | 2008 Ph.D. in Epidemiology and Biostatistics, Seoul National University, School of Public Health, Korea |
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| RESEARCH INTERESTS
| | 2003 M.P.H in Epidemiology and Biostatistics, Seoul National University, School of Public Health, Korea |
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| Statistical genetics and genomics, Genetic Epidemiology, Bioinformatics, Next Generation Sequencing(NGS) data analysis
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| | | 2001 B.S. in Statistics and Biology (double majors) Ewha Womans Univerisity, Korea |
| HONOR AND AWARDS
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| 2012 NHGRI Diversity and Community Outreach GREAT Award for teaching at University of District of Columbia, Washington D.C
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| 2012 Chief Judge for the Fellows Award for Research Excellence (FARE) 2013 in Genomics study section
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| 2011 NIH FARE Award 2012 ($1,000)
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| 2007 Graduate Partnership Program Travel Award ($2,000)
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| 2005 Pre-doctoral Training Fellowship $19,000 supported by Korea Research Foundation of Korea Government
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| PUBLICATIONS
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| (* co-first author)
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| K. C. Desch, A. B. Ozel, D. Siemieniak, Y. Kalish, C. Thornburg, A. Sharathkumar, C. McHugh, C. Laurie, A. Crenshaw, D. Mirel, [[Y. Kim]], C. D. Cropp, A. M. Molloy,
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| P. N. Kirke, J. E. Bailey-Wilson, A. F. Wilson, J. L. Mills, J. M. Scott, L. C. Brody, J. Z. Li and D. Ginsburg, “ Linkage Analysis Identifies a Novel Locus for Plasma von Willebrand
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| Factor Undetected by Genome Wide Association”, in press, PNAS, 2012.
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| C. M. Justice*, G. Yagnik*, [[Y. Kim]], I. Peter, E. W. Jabs, X. Ye, L. Shi, M.L. Cunningham, V. Kimonis, T. Roscioli, S. A. Wall, A. O.M. Wilkie, J. Stoler, J. T. Richtsmeier, Y. Heuze, P. A. Sanchez-Lara, M. F. Buckley, C. M. Druschel, J. L. Mills, M.Caggana, P. A. Romitti, D. M. Kay, C. Senders, P.J. Taub, O. D. Klein, J. Boggan, M. Zwienenberg-Lee, C. Naydenov, J. Kim, A.F. Wilson, S. A. Boyadijiev, “A genome-wide association study identifies susceptibility loci for nonsyndromic sagittal craniosynostosis near BMP2 and within BBS9”, doi:10.1038/ng.2463 Nature Genetics, 2012.
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| Y. Kirino, G. Bertsias, Y. Ishigatsubo, N. Mizuki, I. Tugal-Tutkun, E. Seyahi, Y. Ozyazgan, F. S.Sacli, B. Erer, Z. Emrence, A. Cakar, D. Ustek, C. Satorius, A. Ueda, M. Takeno, [[Y. Kim]], M. J. Ombrello, A. Meguro, A. Gul, E.F. Remmers, D.L.Kastner, “A genome-wide association study identifies new susceptibility loci for Behcet’s disease and epistasis between HLA-B*51 and ERAP1”, in press Nature Genetics, 2012.
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| N. H. Miller, C. M. Justice, B. Marosy, K. Swindle,[[ Y. Kim]], MH. Roy-Gagnon, H. Sung, D. Behneman, K. F. Doheny, E. Pugh, A .F. Wilson “Fine-mapping and family-based association tests of idiopathic scoliosis on 9q31.3-134.3 and 16p12.3-q22.2,” Human Heredity, Vol 74, No. 1, 36-44, 2012.
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| N. N. Hansel, I. Ruczinski, N. Rafaels, D. D. Sin, D. Daley, A. Malinina, L. Huang, A. Sandford, M. Elliott, T. Murray, [[Y. Kim]], C. Vergara, S. R. Heckbert, B. M. Psaty, G. Li, F. Aminuddin, J. Dupuis, G. O’Connor, M. Boezen, D.S.Postma, J.Smolonska, R. Crystal, T. Toshiko, L. Ferruci, E. Silverman, E. Wan, J. Vestbo, D. Lomas, J. Connett, R. A. Wise, E.R. Neptune, R. Mathias, P.D. Pare, T. H. Beaty, K. C. Barnes “Genome-wide study identifies two loci associated with lung function decline in mild to moderate COPD,” Human Genetics, DOI: 10.1007/s00439-012-1219-6, 2012. PMID: 22986903
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| M. J. Emond, T. Louie, J. Emerson, W. Zhao, R. A. Mathias, M. R. Knowles, F. A. Wright, M. J. Rieder, H.K. Tabor, D.A. Nickerson, K.C. Barnes, NHLBI GO Exome Sequencing Project, Lung GO ([[Y. Kim]]), R.L. Gibson & M.J. Bamshad “Exome sequencing of extreme phenotypes identifies DCTN4 as a modifier of chronic Pseudomonas aeruginosa infection in cystic fibrosis,” Nature Genetics, Vol 44: 886–889, 2012.
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| S. P. David, A. Hamidovic, G. K. Chen, A.W. Bergen, J. Wessel, J.L. Kasberger, W. M. Brown, S. Petruzella, E. L. Thacker, [[Y. Kim]], M.A. Nalls, G. J. Tranah, Y.J. Sung, AABC, AAPC, CHS, CARe, GeneSTAR, HANDLS, HealthABC, HyperGEN, WHI(SHARe), C.A. Haiman, H.Furberg, “Genome-wide meta-analyses of smoking behaviors in African Americans”, Translational Psychiatry, 2:e119; doi:10.1038/tp.2012.41, 2012.
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| [[Y. Kim]]*, Q. Li*, C.D. Cropp, H. Sung, J. Cai, C.L. Simpson, B.Perry, A.Dasgupta, J.D. Malley, A.F. Wilson, J.E. Bailey-Wilson “Performance of Random Forests and Logic Regression Methods Using Mini-Exome Sequence data,” BMC proceedings, Vol 5 (supp 9):S104, 2011. PMID: 22373484 PMCID: PMC3287827
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| J.E. Bailey-Wilson, J.S. Brennan, R. Culverhouse, [[Y. Kim]], Y. Jiang, J. Jung, Q. Li, C. Scholosberg, L. Wang, Y.E. Yilmaz, H. Zhang, Z. Zhan, “Regression and Data Mining Methods for Analyses of Multiple Rare Variants in GAW17 “ Mini-Exome” data,” Genetic Epidemiology, Vol 35(supp 1):S92-S100, 2011. PMID: 22128066 PMCID: PMC3360949
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| H. Sung, [[Y. Kim]], J. Cai, C.D. Cropp, C.L. Simpson, Q. Li, B. C Perry, A.J.M. Sorant, J.E. Bailey-Wilson, A.F. Wilson “A comparison of results from tests of association in unrelated individuals with uncollapsed and collapsed sequence variants using tiled regression,” BMC proceedings, Vol 5(supp 9):S15, 2011. PMID: 22373501 PMCID: PMC3287849
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| T.L. Assimes, H. Holm, ADVANCE, CATHGEN, GeneSTAR ([[Y. Kim]]), INTERHEART study groups, decode genetics, and T. Quertermous “Lack of association between the Trp719Arg polymorphism in kinesin-like protein 6 and coronary artery disease in 19 case-control studies,” Journal of the American College of Cardiology, Vol 56, No 19, 2010. PMID: 20933357 PMCID: PMC3084526
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| R.A. Mathias*, [[Y. Kim]]*, H. Sung, R.Y. Yanek, J.E. Hererra-Galeano, I. Ruczinski, A.F. Wilson, N. Faraday, L.C. Becker, D.M. Becker “A Combined genome-wide linkage and association approach to find susceptibility loci for platelet function phenotypes in Caucasian and African American families with coronary artery disease,” BMC Medical Genomics, 3:22, 2010. PMID: 20529293 PMCID: PMC2890666
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| [[Y. Kim]], R. Wojciechowski, H. Sung, R.A. Mathias, L. Wang, A.P. Klein, R.K. Lenroot, J. Malley, J.E. Bailey-Wilson, “Evaluation of random forests performance for genome wide association studies in the presence of interaction effects,” BMC Proceedings, Vol3 (supp 7) s64, 2009. PMID: 20018058 PMCID: PMC2795965
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| [[Y. Kim]], P. Duggal, E.M. Gillanders, H. Kim, J.E. Bailey-Wilson, “Examining the effect of linkage disequilibrium between markers on the Type I error rate and power of nonparametric multipoint linkage analysis of two-generation and multigenerational pedigrees in the presence of missing genotype data,” Genetic Epidemiology; 32:41-51, 2008. PMID: 17685456 PMCID: PMC2216429
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| [[Y. Kim]], H. Kim. “Application of Random Forests to Association Studies Using Mitochondrial Single Nucleotide Polymorphisms,” Genomics & Informatics Vol. 5 (4) 168-173, 2007.
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| [[Y. Kim]], B. Doan, P. Duggal, J. E. Bailey-Wilson, “Normalization of microarray expression data using within-pedigree pool and its effect on linkage analysis,” BMC Genetics Proceedings, I (Supp 1) S152, 2007.
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| Sung J, Cho SI, Song YM, Lee K, Choi EY, Ha M, Kim J, Kim H, [[Kim Y]], Shin EK, Kim YH, Yoo KY, Park C, Kimm K, “Do we need more twin studies? The Healthy Twin Study, Korea,” Int J Epidemiology, 35(2):488-90, 2006.
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| S.H. Lee, J.M. Park, S.J. Kwon, H. Kim, [[Y.H. Kim]], J.K. Roh, and B.W. Yoon, “Left ventricular hypertrophy is associated with cerebral microbleeds in hypertensive patients,” Neurology, 63: 16-21, 2004.
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| S.H. Lee, H.J. Bae, S.J. Kwon, H. Kim, [[Y.H. Kim]], B.W. Yoon, and J.K. Roh, “Cerebral microbleeds are regionally associated with intra cerebral hemorrhage,” Neurology, 62:72-76, 2004.
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| [[Y. Kim]], W. Park, H. Kim, “An iterative normalization algorithm from cDNA microarray medical data analysis,” Vol.2 (2) 94-100, Genomics & Informatics, 2004.
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