CH391L/S12/Assignments

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(Other topic ideas)
(New Topics: Basic Gene Construction)
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=== New Topics: Basic Gene Construction ===
=== New Topics: Basic Gene Construction ===
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* Transcriptional promoters - EMPTY
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* Transcriptional promoters - Jon Laurent
* Transcription termination - Logan Bachman
* Transcription termination - Logan Bachman
* Translation. Ribosome binding sites and codon optimization - EMPTY
* Translation. Ribosome binding sites and codon optimization - EMPTY

Revision as of 17:51, 8 February 2012

In reverse chronological order...

Yet to sign up for first presentation:

  • Jon Laurent
  • Jeremy McLain
  • Peter Otoupal

Contents

Other topic ideas

  • Directed evolution (plasmid-based in vivo evolution of thermostability, altered substrate specificity, etc). - EMPTY
    • Possible reference [1]
  1. Gupta RD, Goldsmith M, Ashani Y, Simo Y, Mullokandov G, Bar H, Ben-David M, Leader H, Margalit R, Silman I, Sussman JL, and Tawfik DS. . pmid:21217689. PubMed HubMed [Gupta2011]
  • CAD systems for synthetic biology - EMPTY

For Monday, February 27, 2012

  • Comment on or add to old topics.

New Topics: Basic Gene Construction

  • Transcriptional promoters - Jon Laurent
  • Transcription termination - Logan Bachman
  • Translation. Ribosome binding sites and codon optimization - EMPTY

For Monday, February 20, 2012

  • Comment on or add to old topics.

New Topics: Chassis and Backbones

  • Artificial chromosomes and plasmids - replication origins - EMPTY
  • Selectable genetic markers (Ab resistance, etc.) - EMPTY
  • Toxin/anti-toxins, plasmid addiction systems - Brian Renda
  • Counter-selectable genetic markers - Erik Quandt

For Monday, February 13, 2012

  • Comment on or add to old topics.

New Topics: Optimizing Parts and their Interactions

  • Gene/genome synthesis/Gibson assembly - Joe Hanson
  • Host organisms (general properties of common ones, new ones that are being developed) - Michael Hammerling
  • Metabolic engineering - Razan Alnahhas

For Monday, February 6, 2012

  • Add a link to your user page to the CH391L Users Page.
  • Add something to your user page.
  • Comment on or add to old topics.

New Topics: Assembling Biological Parts

  • Restriction enzyme cloning & BioBricks/BglBricks assembly - Ben Slater
  • Advanced PCR techniques - Yi Kou

For Monday, January 30, 2012

New Topics: Finding Biological Parts

  • iGEM registry - Midhat Patel
  • bioprospecting / metagenomics - David Truong
  • directed evolution / in vitro selection - Adam Meyer
  • ancestral protein construction - Jared Ellefson
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