CHIP:Data: Difference between revisions
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= Supporting data and software = | |||
Nevozhay D, Adams RM, Van Itallie E, Bennett MR, Balázsi G,<br> | ===='''Fitness landscape data (rar archive):''' [http://openwetware.org/wiki/Image:FitnessLandscape.rar]==== | ||
Mapping the environmental fitness landscape of a synthetic gene circuit.<br> | :'''This is supporting information for the paper:''' | ||
PLoS Comput. Biol. 8(4):e1002480 (2012).<br> | |||
PMID: 22511863, link to the PDF: [http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1002480]<br><br> | :Nevozhay D, Adams RM, Van Itallie E, Bennett MR, Balázsi G,<br> | ||
:Mapping the environmental fitness landscape of a synthetic gene circuit.<br> | |||
:PLoS Comput. Biol. 8(4):e1002480 (2012).<br> | |||
:PMID: 22511863, link to the PDF: [http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1002480]<br><br> | |||
===='''Plasmids with sequences ready to be ordered from the public repository AddGene:''' [http://www.addgene.org/Gabor_Balazsi/]==== | |||
:'''These plasmids are supporting information for the following papers:''' | |||
:Nevozhay D, Zal T, Balázsi G,<br> | |||
:Transferring a synthetic gene circuit from yeast to mammalian cells.<br> | |||
:Nat Commun. 2013;4:1451.<br> | |||
:PMID: 23385595, link to the PDF: coming soon<br><br> | |||
:Nevozhay D, Adams RM, Van Itallie E, Bennett MR, Balázsi G,<br> | |||
:Mapping the environmental fitness landscape of a synthetic gene circuit.<br> | |||
:PLoS Comput. Biol. 8(4):e1002480 (2012).<br> | |||
:PMID: 22511863, link to the PDF: [http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1002480]<br><br> | |||
:Nevozhay D, Adams RM, Murphy KF, Josić K, Balázsi G,<br> | |||
:Negative autoregulation linearizes the dose-response and suppresses the heterogeneity of gene expression.<br> | |||
:Proc. Natl. Acad. Sci. U.S.A. 2009 Mar 31;106(13):5123-8.<br> | |||
:PMID: 19279212, link to the PDF: [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2654390/pdf/zpq5123.pdf]<br><br> | |||
===='''Small RNA target prediction program (zip archive):''' [http://openwetware.org/wiki/Image:RankFusion_V1.zip]==== | |||
:'''This is supporting information for an upcoming paper by Diogo F. T. Veiga.''' | |||
:'''Additional Supplemental Materials are available from here: ''' [http://openwetware.org/wiki/Image:Supplemental_Material.zip] | |||
'''Back to the main page:''' [[CHIP]] | |||
Revision as of 12:07, 14 July 2014
Supporting data and software
Fitness landscape data (rar archive): [1]
- This is supporting information for the paper:
- Nevozhay D, Adams RM, Van Itallie E, Bennett MR, Balázsi G,
- Mapping the environmental fitness landscape of a synthetic gene circuit.
- PLoS Comput. Biol. 8(4):e1002480 (2012).
- PMID: 22511863, link to the PDF: [2]
Plasmids with sequences ready to be ordered from the public repository AddGene: [3]
- These plasmids are supporting information for the following papers:
- Nevozhay D, Zal T, Balázsi G,
- Transferring a synthetic gene circuit from yeast to mammalian cells.
- Nat Commun. 2013;4:1451.
- PMID: 23385595, link to the PDF: coming soon
- Nevozhay D, Adams RM, Van Itallie E, Bennett MR, Balázsi G,
- Mapping the environmental fitness landscape of a synthetic gene circuit.
- PLoS Comput. Biol. 8(4):e1002480 (2012).
- PMID: 22511863, link to the PDF: [4]
- Nevozhay D, Adams RM, Murphy KF, Josić K, Balázsi G,
- Negative autoregulation linearizes the dose-response and suppresses the heterogeneity of gene expression.
- Proc. Natl. Acad. Sci. U.S.A. 2009 Mar 31;106(13):5123-8.
- PMID: 19279212, link to the PDF: [5]
Small RNA target prediction program (zip archive): [6]
- This is supporting information for an upcoming paper by Diogo F. T. Veiga.
- Additional Supplemental Materials are available from here: [7]
Back to the main page: CHIP
