Cfrench:hemlist1

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Genera of bacteria and archaea with hemerythrin-like genes

Based on searches performed during November 2006.

Genusfamilyorderclass/phylumnumber of hemerythrins
Acidobacteria sp.AcidobacteriaeaeAcidobacterialesAcidobacteria4
AcidovoraxComamonadaceaeBurkholderialesBetaproteobacteria1,3
AeromonasAeromonadaceaeAeromonadalesGammaproteobacteria2
AlcanivoraxAlcanivoraceaeOceanospirillalesGammaproteobacteria1
AlkalilimnicolaEctothiorhodospiraceaeChromatialesGammaproteobacteria2
AnaeromyxobacterMyxococcaceaeMyxococcalesDeltaproteobacteria8
AquifexAquificaceaeAquificalesAquificae1
AzotobacterPseudomonadaceaePseudomonadalesGammaproteobacteria1
BdellovibrioBdellovibrionaceaeBdellovibrionalesDeltaproteobacteria1
BordetellaAlcaligenaceaeBurkholderialesBetaproteobacteria1
BurkholderiaBurkholderiaceaeBurkholderialesBetaproteobacteria23 strains 1 each, 1 strain has 3
CampylobacterCampylobacteraceaeCampylobacteralesEpsilonproteobacteria7, 2, 6, 3, 5, 5, 5, 5, 3, 2, 2, 5
CaldocellulosiruptorSyntrophomonadaceaeClostridialesClostridia, Firmicutes1
ClostridiumClostridicaeaeClostridialesClostridia, Firmicutes1, 6, 5, 1, 2
ColwelliaColwelliaceaeAlteromonadalesGammaproteobacteria7
ComamonasComamonadaceaeBurkholderialesBetaproteobacteria4
DechloromonasRhodocyclaceaeRhodocyclalesBetaproteobacteria10
DesulfitobacteriumPeptococcaceaeClostridialesClostridia, Firmicutes2, 2
DesulfotaleaDesulfobulbaceaeDesulfobacteralesDeltaproteobacteria3
DesulfovibrioDesulfovibrionaceaeDesulfovibrionalesDeltaproteobacteria3, 4, 4
DesulfuromonasDesulfuromonadaceaeDesulfuromonadalesDeltaproteobacteria10
LeuwenhoekiellaFlavobacteriaceaeFlavobacterialesFlavobacteria, Bacteroidetes1
GeobacterGeobacteraceaeDesulfuromonadalesDeltaproteobacteria2, 2, 2, 5
HaloarculaHalobacteriaceaeHalobacterialesHalobacteria, Euryarchaeota1
HalorhodospiraEctothiorhodospiraceaeChromatialesGammaproteobacteria1
HelicobacterHelicobacteraceaeCampylobacteralesEpsilonproteobacteria2
HydrogenobacterAquificaceaeAquificalesAquificae1
IdiomarinaIdiomarinaceaeAlteromonadalesGammaproteobacteria1, 1
JanthinobacteriumOxalobacteraceaeBurkholderialesBetaproteobacteria1 or 2
Kuenenia PlanctomycetalesPlanctomycetes2
Magnetococcus Proteobacteria14 to 19
MagnetospirillumRhodospirillaceaeRhodospirillalesAlphaproteobacteriaapprox 29, 29
Mariprofundus Proteobacteria1
MesorhizobiumPhyllobacteriaceaeRhizobialesAlphaproteobacteria1
MethanocaldococcusMethanocaldococcaceaeMethanococcalesMethanococci, Euryarchaeota1
MethanospirillumMethanospirillaceaeMethanomicrobialesMethanomicrobia, Euryarchaeota2
MethylococcusMethylococcaceaeMethylococcalesGammaproteobacteria1
MLMS1 Deltaprotebacteria5?
Oceanospirillum OceanospirillalesGammaproteobacteria3
PelobacterPelobacteraceaeDesulfuromonadalesDeltaproteobacteria3, 1
PolaromonasComamonadaceaeBurkholderialesBetaproteobacteria3
PseudomonasPseudomonadaceaePseudomonadalesGammaproteobacteria8 strains, 1 each
RalstoniaBurkholderiaceaeBurkholderialesBetaproteobacteria2, 2, 1
Reinekea Gammaproteobacteria2
RhodoferaxComamonadaceaeBurkholderialesBetaproteobacteria2,2
RhodopseudomonasBradyrhizobiaceaeRhizobialesAlphaproteobacteria1, 1, 1
RhodospirillumRhodospirillaceaeRhodospirillalesAlphaproteobacteria6
ShewanellaShewanellaceaeAlteromonadalesGammaproteobacteria11 strains, 1 each
SolibacterSolibacteraceaeSolibacteralesSolibacteres, Acidobacteria3
Symbiobacterium Actinobacteria1
SyntrophomonasSyntrophomonadaceaeClostridialesClostridia, Firmicutes1
ThermoanaerobacterThermoanaerobacteriaceaeThermoanaerobacterialesClostridia, Firmicutes1
Thermosynechococcus ChroococcalesCyanobacteria2
ThiomicrospiraHelicobacteraceaeCampylobacteralesEpsilonproteobacteria1
VerminephrobacterComamonadaceaeBurkholderialesBetaproteobacteria1
VibrioVibrionaceaeVibrionalesGammaproteobacteria8 strains, 1 each
WolinellaHelicobacteraceaeCampylobacteralesEpsilonproteobacteria1
XanthomonasXanthomonadaceaeXanthomonadalesGammaproteobacteria1, 1, 1, 1

List ordered taxonomically

Genusfamilyorderclass/phylumnumber of hemerythrins
Acidobacteria sp.AcidobacteriaeaeAcidobacterialesAcidobacteria4
SolibacterSolibacteraceaeSolibacteralesSolibacteres, Acidobacteria3
AquifexAquificaceaeAquificalesAquificae1
HydrogenobacterAquificaceaeAquificalesAquificae1
RhodopseudomonasBradyrhizobiaceaeRhizobialesAlphaproteobacteria1, 1, 1
MesorhizobiumPhyllobacteriaceaeRhizobialesAlphaproteobacteria1
MagnetospirillumRhodospirillaceaeRhodospirillalesAlphaproteobacteriaapprox 29, 29
RhodospirillumRhodospirillaceaeRhodospirillalesAlphaproteobacteria6
Magnetococcus Alphaproteobacteria14 to 19
BordetellaAlcaligenaceaeBurkholderialesBetaproteobacteria1
BurkholderiaBurkholderiaceaeBurkholderialesBetaproteobacteria23 strains 1 each, 1 strain has 3
RalstoniaBurkholderiaceaeBurkholderialesBetaproteobacteria2, 2, 1
AcidovoraxComamonadaceaeBurkholderialesBetaproteobacteria1,3
ComamonasComamonadaceaeBurkholderialesBetaproteobacteria4
PolaromonasComamonadaceaeBurkholderialesBetaproteobacteria3
RhodoferaxComamonadaceaeBurkholderialesBetaproteobacteria2,2
VerminephrobacterComamonadaceaeBurkholderialesBetaproteobacteria1
JanthinobacteriumOxalobacteraceaeBurkholderialesBetaproteobacteria1 or 2
DechloromonasRhodocyclaceaeRhodocyclalesBetaproteobacteria10
AeromonasAeromonadaceaeAeromonadalesGammaproteobacteria2
ColwelliaColwelliaceaeAlteromonadalesGammaproteobacteria7
IdiomarinaIdiomarinaceaeAlteromonadalesGammaproteobacteria1, 1
ShewanellaShewanellaceaeAlteromonadalesGammaproteobacteria11 strains, 1 each
AlkalilimnicolaEctothiorhodospiraceaeChromatialesGammaproteobacteria2
HalorhodospiraEctothiorhodospiraceaeChromatialesGammaproteobacteria1
MethylococcusMethylococcaceaeMethylococcalesGammaproteobacteria1
Oceanospirillum OceanospirillalesGammaproteobacteria3
AlcanivoraxAlcanivoraceaeOceanospirillalesGammaproteobacteria1
AzotobacterPseudomonadaceaePseudomonadalesGammaproteobacteria1
PseudomonasPseudomonadaceaePseudomonadalesGammaproteobacteria8 strains, 1 each
VibrioVibrionaceaeVibrionalesGammaproteobacteria8 strains, 1 each
XanthomonasXanthomonadaceaeXanthomonadalesGammaproteobacteria1, 1, 1, 1
Reinekea Gammaproteobacteria2
BdellovibrioBdellovibrionaceaeBdellovibrionalesDeltaproteobacteria1
DesulfotaleaDesulfobulbaceaeDesulfobacteralesDeltaproteobacteria3
DesulfovibrioDesulfovibrionaceaeDesulfovibrionalesDeltaproteobacteria3, 4, 4
DesulfuromonasDesulfuromonadaceaeDesulfuromonadalesDeltaproteobacteria10
GeobacterGeobacteraceaeDesulfuromonadalesDeltaproteobacteria2, 2, 2, 5
PelobacterPelobacteraceaeDesulfuromonadalesDeltaproteobacteria3, 1
AnaeromyxobacterMyxococcaceaeMyxococcalesDeltaproteobacteria8
MLMS1 Deltaprotebacteria5?
CampylobacterCampylobacteraceaeCampylobacteralesEpsilonproteobacteria7, 2, 6, 3, 5, 5, 5, 5, 3, 2, 2, 5
HelicobacterHelicobacteraceaeCampylobacteralesEpsilonproteobacteria2
ThiomicrospiraHelicobacteraceaeCampylobacteralesEpsilonproteobacteria1
WolinellaHelicobacteraceaeCampylobacteralesEpsilonproteobacteria1
Mariprofundus Proteobacteria1
ClostridiumClostridicaeaeClostridialesClostridia, Firmicutes1, 6, 5, 1, 2
DesulfitobacteriumPeptococcaceaeClostridialesClostridia, Firmicutes2, 2
CaldocellulosiruptorSyntrophomonadaceaeClostridialesClostridia, Firmicutes1
SyntrophomonasSyntrophomonadaceaeClostridialesClostridia, Firmicutes1
ThermoanaerobacterThermoanaerobacteriaceaeThermoanaerobacterialesClostridia, Firmicutes1
LeuwenhoekiellaFlavobacteriaceaeFlavobacterialesFlavobacteria, Bacteroidetes1
Kuenenia PlanctomycetalesPlanctomycetes2
Symbiobacterium Actinobacteria1
Thermosynechococcus ChroococcalesCyanobacteria2
HaloarculaHalobacteriaceaeHalobacterialesHalobacteria, Euryarchaeota1
MethanocaldococcusMethanocaldococcaceaeMethanococcalesMethanococci, Euryarchaeota1
MethanospirillumMethanospirillaceaeMethanomicrobialesMethanomicrobia, Euryarchaeota2


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