Chris Rhodes Week 14
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Files
Increased MAPPFinder Results XLS
Decreased MAPPFinder Results XLS
Increased MAPPFinder Results TXT
Decreased MAPPFinder Results TXT
Materials we need
- Table of significant genes at p< 0.05,0.01,0.001
- Top ten significant genes
- Top ten increased/decreased GO terms
- Make a list of the functions of the top ten genes.
- Take all of this data and hypothesize why under the conditions of the experiment they would be up or down regulated.
- How do your top ten significant genes relate to the GO terms? How do they relate to the experimental conditions?
- How do your results and hypothesis align with the paper you read?
Decreased GO Terms
- fructuronate reductase activity:
- precorrin-3B C17-methyltransferase activity:
- precorrin-2 C20-methyltransferase activity:
- coniferyl-aldehyde dehydrogenase activity:
- inositol-1(or 4)-monophosphatase activity:
- trans-2-enoyl-CoA reductase (NADPH) activity:
- aldehyde dehydrogenase [NAD(P)+] activity:
- oxidoreductase activity:
- inositol or phosphatidylinositol phosphatase activity:
- cellular aldehyde metabolic process:
Increased GO Terms
- RNA metabolic process:
- regulation of transcription:
- regulation of nitrogen compound metabolic process:
- regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process:
- regulation of macromolecule biosynthetic process:
- regulation of gene expression:
- regulation of cellular macromolecule biosynthetic process:
- regulation of cellular biosynthetic process:
- regulation of biosynthetic process:
- regulation of macromolecule metabolic process:
Top Ten Regulated Genes
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