Computing

General

Conferencing (phone, video, IM/chat)
Cluster
Eclipse
Emacs
Encryption
Firefox
Java
Linux - various resources
MySQL
Perl
PHP
PPT to PDF on a Mac
Python
Ruby
SSH - Secure Shell
SSL - Secure Socket Layer
Subversion (SVN) version control system
Virtualization
VNC
VoIP
Web programming

Regular Expressions - tutorial and examples in various languages (a.k.a. regexp.info)
ILoveJackDaniel's - web design and development reference
TechCheatSheets.com - technology and programming quick reference
Google Code Search helps you find function definitions and sample code by giving you one place to search publicly accessible source code hosted on the Internet
gotAPI.com - the most comprehensive API collection on the web
- start.gotapi.com - alternative search interface
Publicidade Digital - Technology on Digital Marketing, News and Public Articles reference.
Otimização de Sites - Technology CSS and PHP SEO programming reference
Otimização de Sites - CSS and PHP for SEO services and programming
Marketing Digital - Marketing Digital Reference

Scientific

Robotics software (Liquid Handling, etc)
In silico protocols on OWW
Computational Tools for synthetic biology on OWW
Software Carpentry - this course is an intensive introduction to basic software development practices for scientists and engineers that can reduce the time they spend programming by 20-25%.
Graphing high dimensional data
Biosoftware for Mac
Software for papers, posters and talks
VectorNTI
MATLAB
- MATLAB_Computational_Biology_Tools
R for Statistical Computing
The Really Easy Statistics Site
Modeller
Microfootprinter
Genamics SoftwareSeek links to biotechnology software
LIMS - Laboratory Information Management Systems
bioPIXIE is a novel system for biological data integration and visualization that allows the user to discover interaction networks and pathways in which the user's gene(s)of interest participate
PerlPrimer - open-source PCR primer design (Windows and Linux)
EnzymeX is a program for molecular biologists, developed to help you determine which restriction enzymes you should use to cut your DNA of interest
Papers allows find, download, archive, and organize all your articles within a single application
4Peaks is a program that helps molecular biologists to visualize and edit their DNA sequence files
LabAssistant is a scientific program developed to help you organize your experiments instead of using multiple timers, stickies, and a labjournal that you have to organize all manually
iRNAi is a tool to help scientists quickly design error free oligos
PlasmaDNA is a freeware program designed to analyse and manipulate DNA sequences to simulate restriction enzyme digestions, ligations and PCR. Identical versions are available for PC and Mac operating systems.
The Tranche Project is a free and open source file sharing tool that enables collections of computers to easily share and cite scientific data sets.

MIT

Athena - AFS lockers, Kerberos tickets, user accounts
BioMicro Center - DNA-NET accounts and file storage
BioMicro Cluster
Xgrid@MIT - join the grid and donate or borrow CPU cycles
OpenMacGrid by MacResearch is a computing grid built up entirely of Macs using Apple's Xgrid technology
ChemDraw Ultra
- BioDraw tools for drawing, sharing, and presenting biological pathways are included with ChemDraw. Common pathway elements (membranes, DNA, enzymes, receptors, reaction arrows, etc.) are built in and other elements may be imported.
Find Out the Name of Your Post Office Server
Spam screening help page
Spam Screening Personalized Settings
the infrastructure group @ csail - useful MIT computing info though a lot of it is specific CSAIL
MIT Network and Infrastructure Team - network maps, etc
MIT IT Partners

Computing

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General Non Scientific Programming

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