Crosby:Research: Difference between revisions

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Search [http://www.ncbi.nlm.nih.gov/pubmed?term=(crosby%20wl)%20or(%20Crosby%20w%20and%20plant)%20or(%20Crosby%20wa)  Pubmed] for more publications from the Crosby lab
<h3><font style="color:#006400;">Search [http://www.ncbi.nlm.nih.gov/pubmed?term=(crosby%20wl)%20or(%20Crosby%20w%20and%20plant)%20or(%20Crosby%20wa)  Pubmed]or [http://scholar.google.ca/citations?user=p-So88kAAAAJ&hl=en Google Scholar] for more publications from the Crosby lab</font></h3>
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==Select Recent Publications==
*Birney, E., Hudson, T.J., Green, E.D., Gunter, C., Eddy, S., Rogers, J., Harris, J.R., Ehrlich, S.D., Apweiler, R., Austin, C.P., Berglund, L., Bobrow, M., Bountra, C., Brookes, A.J., Cambon-Thomsen, A., Carter, N.P., Chisholm, R.L., Contreras, J.L., Cooke, R.M., '''Crosby, W.L.''', Dewar, K., Durbin, R., Dyke, S.O., Ecker, J.R., El Emam, K., Feuk, L., Gabriel, S.B., Gallacher, J., Gelbart, W.M., Granell, A., Guarner, F., Hubbard, T., Jackson, S.A., Jennings, J.L., Joly, Y., Jones, S.M., Kaye, J., Kennedy, K.L., Knoppers, B.M., Kyrpides, N.C., Lowrance, W.W., Luo, J., MacKay, J.J., Martin-Rivera, L., McCombie, W.R., McPherson, J.D., Miller, L., Miller, W., Moerman, D., Mooser, V., Morton, C.C., Ostell, J.M., Ouellette, B.F., Parkhill, J., Raina, P.S., Rawlings, C., Scherer, S.E., Scherer, S.W., Schofield, P.N., Sensen, C.W., Stodden, V.C., Sussman, M.R., Tanaka, T., Thornton, J., Tsunoda, T., Valle, D., Vuorio, E.I., Walker, N.M., Wallace, S., Weinstock, G., Whitman, W.B., Worley, K.C., Wu, C., Wu, J., and Yu, J. (2009). Prepublication data sharing. Nature 461, 168-170.




1: Dezfulian MH, Jalili E, Roberto DK, Moss BL, Khoo K, Nemhauser JL, Crosby WL.
Oligomerization of SCFTIR1 Is Essential for Aux/IAA Degradation and Auxin
Signaling in Arabidopsis. PLoS Genet. 2016 Sep 12;12(9):e1006301. doi:
10.1371/journal.pgen.1006301. eCollection 2016 Sep. PubMed PMID: 27618443.


*Liu, S.Y., Yu, K., Huffner, M., Park, S.J., Banik, M., Pauls, K.P., and '''Crosby, W.''' (2010). Construction of a BAC library and a physical map of a major QTL for CBB resistance of common bean (Phaseolus vulgaris L.). Genetica 138, 709-716.


2: Pandurangan S, Diapari M, Yin F, Munholland S, Perry GE, Chapman BP, Huang S,
Sparvoli F, Bollini R, Crosby WL, Pauls KP, Marsolais F. Genomic Analysis of
Storage Protein Deficiency in Genetically Related Lines of Common Bean (Phaseolus
vulgaris). Front Plant Sci. 2016 Mar 31;7:389. doi: 10.3389/fpls.2016.00389.
eCollection 2016. PubMed PMID: 27066039; PubMed Central PMCID: PMC4814446.


*Dezfulian, M.H., Soulliere, D.M., Dhaliwal, R.K., Sareen, M., and '''Crosby, W.L.''' (2012). The SKP1-like gene family of Arabidopsis exhibits a high degree of differential gene expression and gene product interaction during development. PloS one 7, e50984.


3: Risseeuw E, Venglat P, Xiang D, Komendant K, Daskalchuk T, Babic V, Crosby W,
Datla R. An activated form of UFO alters leaf development and produces ectopic
floral and inflorescence meristems. PLoS One. 2013 Dec 23;8(12):e83807. doi:
10.1371/journal.pone.0083807. eCollection 2013. PubMed PMID: 24376756; PubMed
Central PMCID: PMC3871548.




*Perry, G., Dinatale, C., Xie, W., Navabi, A., Reinprecht, Y., '''Crosby, W.''', Yu, K., Shi, C., and Pauls, K.P. (2013). A comparison of the molecular organization of genomic regions associated with resistance to common bacterial blight in two Phaseolus vulgaris genotypes. Frontiers in plant science 4, 318.
4: Perry G, Dinatale C, Xie W, Navabi A, Reinprecht Y, Crosby W, Yu K, Shi C,
Pauls KP. A comparison of the molecular organization of genomic regions
associated with resistance to common bacterial blight in two Phaseolus vulgaris
genotypes. Front Plant Sci. 2013 Aug 29;4:318. doi: 10.3389/fpls.2013.00318.
eCollection 2013. PubMed PMID: 24009615; PubMed Central PMCID: PMC3756299.




*Risseeuw, E., Venglat, P., Xiang, D., Komendant, K., Daskalchuk, T., Babic, V., '''Crosby, W.''', and Datla, R. (2013). An Activated Form of UFO Alters Leaf Development and Produces Ectopic Floral and Inflorescence Meristems. PloS one 8, e83807.
5: Dezfulian MH, Soulliere DM, Dhaliwal RK, Sareen M, Crosby WL. The SKP1-like
gene family of Arabidopsis exhibits a high degree of differential gene expression
and gene product interaction during development. PLoS One. 2012;7(11):e50984.
doi: 10.1371/journal.pone.0050984. Epub 2012 Nov 30. PubMed PMID: 23226441;
PubMed Central PMCID: PMC3511428.




*Zou, X., Shi, C., Austin, R.S., Merico, D., Munholland, S., Marsolais, F., Navabi, A., '''Crosby, W.L.''', Pauls, K.P., and Yu, K. (2013). Genome-wide single nucleotide polymorphism and Insertion-Deletion discovery through next-generation sequencing of reduced representation libraries in common bean. Molecular Breeding, 1-10.
6: Liu SY, Yu K, Huffner M, Park SJ, Banik M, Pauls KP, Crosby W. Construction of
a BAC library and a physical map of a major QTL for CBB resistance of common bean
(Phaseolus vulgaris L.). Genetica. 2010 Jul;138(7):709-16. doi:
10.1007/s10709-010-9450-3. Epub 2010 Apr 25. PubMed PMID: 20419470.
 
 
7: Toronto International Data Release Workshop Authors, Birney E, Hudson TJ,
Green ED, Gunter C, Eddy S, Rogers J, Harris JR, Ehrlich SD, Apweiler R, Austin
CP, Berglund L, Bobrow M, Bountra C, Brookes AJ, Cambon-Thomsen A, Carter NP,
Chisholm RL, Contreras JL, Cooke RM, Crosby WL, Dewar K, Durbin R, Dyke SO, Ecker
JR, El Emam K, Feuk L, Gabriel SB, Gallacher J, Gelbart WM, Granell A, Guarner F,
Hubbard T, Jackson SA, Jennings JL, Joly Y, Jones SM, Kaye J, Kennedy KL,
Knoppers BM, Kyrpides NC, Lowrance WW, Luo J, MacKay JJ, Martín-Rivera L,
McCombie WR, McPherson JD, Miller L, Miller W, Moerman D, Mooser V, Morton CC,
Ostell JM, Ouellette BF, Parkhill J, Raina PS, Rawlings C, Scherer SE, Scherer
SW, Schofield PN, Sensen CW, Stodden VC, Sussman MR, Tanaka T, Thornton J,
Tsunoda T, Valle D, Vuorio EI, Walker NM, Wallace S, Weinstock G, Whitman WB,
Worley KC, Wu C, Wu J, Yu J. Prepublication data sharing. Nature. 2009 Sep
10;461(7261):168-70. doi: 10.1038/461168a. PubMed PMID: 19741685; PubMed Central
PMCID: PMC3073843.
 
 
8: Houde M, Belcaid M, Ouellet F, Danyluk J, Monroy AF, Dryanova A, Gulick P,
Bergeron A, Laroche A, Links MG, MacCarthy L, Crosby WL, Sarhan F. Wheat EST
resources for functional genomics of abiotic stress. BMC Genomics. 2006 Jun
13;7:149. PubMed PMID: 16772040; PubMed Central PMCID: PMC1539019.
 
 
9: Hill JE, Goh SH, Money DM, Doyle M, Li A, Crosby WL, Links M, Leung A, Chan D,
Hemmingsen SM. Characterization of vaginal microflora of healthy, nonpregnant
women by chaperonin-60 sequence-based methods. Am J Obstet Gynecol. 2005
Sep;193(3 Pt 1):682-92. PubMed PMID: 16150261.
 
 
10: Alting-Mees MA, Risseeuw EP, Liu E, Desautels M, Crosby WA, Hemmingsen SM.
Intracellular expression of recombinant antibody fluorescent protein fusions for
localization of target antigens in Schizosaccharomyces pombe. Methods Mol Biol.
2006;313:97-105. PubMed PMID: 16118428.
 
 
11: Han L, Mason M, Risseeuw EP, Crosby WL, Somers DE. Formation of an SCF(ZTL)
complex is required for proper regulation of circadian timing. Plant J. 2004
Oct;40(2):291-301. PubMed PMID: 15447654.
 
 
12: Zhao D, Han T, Risseeuw E, Crosby WL, Ma H. Conservation and divergence of
ASK1 and ASK2 gene functions during male meiosis in Arabidopsis thaliana. Plant
Mol Biol. 2003 Sep;53(1-2):163-73. PubMed PMID: 14756314.
 
 
13: Alonso JM, Stepanova AN, Leisse TJ, Kim CJ, Chen H, Shinn P, Stevenson DK,
Zimmerman J, Barajas P, Cheuk R, Gadrinab C, Heller C, Jeske A, Koesema E, Meyers
CC, Parker H, Prednis L, Ansari Y, Choy N, Deen H, Geralt M, Hazari N, Hom E,
Karnes M, Mulholland C, Ndubaku R, Schmidt I, Guzman P, Aguilar-Henonin L, Schmid
M, Weigel D, Carter DE, Marchand T, Risseeuw E, Brogden D, Zeko A, Crosby WL,
Berry CC, Ecker JR. Genome-wide insertional mutagenesis of Arabidopsis thaliana.
Science. 2003 Aug 1;301(5633):653-7. Erratum in: Science. 2003
Sep;301(5641):1849. PubMed PMID: 12893945.
 
 
14: Risseeuw EP, Daskalchuk TE, Banks TW, Liu E, Cotelesage J, Hellmann H,
Estelle M, Somers DE, Crosby WL. Protein interaction analysis of SCF ubiquitin E3
ligase subunits from Arabidopsis. Plant J. 2003 Jun;34(6):753-67. PubMed PMID:
12795696.
 
 
15: Wang X, Feng S, Nakayama N, Crosby WL, Irish V, Deng XW, Wei N. The COP9
signalosome interacts with SCF UFO and participates in Arabidopsis flower
development. Plant Cell. 2003 May;15(5):1071-82. PubMed PMID: 12724534; PubMed
Central PMCID: PMC153717.
 
 
16: Diaz-Camino C, Risseeuw EP, Liu E, Crosby WL. A high-throughput system for
two-hybrid screening based on growth curve analysis in microtiter plates. Anal
Biochem. 2003 May 15;316(2):171-4. PubMed PMID: 12711337.
 
 
17: Wilkinson MD, Block D, Crosby WL. Genquire: genome annotation browser/editor.
Bioinformatics. 2002 Oct;18(10):1398-9. PubMed PMID: 12376386.
 
 
18: Xu L, Liu F, Lechner E, Genschik P, Crosby WL, Ma H, Peng W, Huang D, Xie D.  
The SCF(COI1) ubiquitin-ligase complexes are required for jasmonate response in
Arabidopsis. Plant Cell. 2002 Aug;14(8):1919-35. PubMed PMID: 12172031; PubMed
Central PMCID: PMC151474.
 
 
19: Hill JE, Seipp RP, Betts M, Hawkins L, Van Kessel AG, Crosby WL, Hemmingsen
SM. Extensive profiling of a complex microbial community by high-throughput
sequencing. Appl Environ Microbiol. 2002 Jun;68(6):3055-66. PubMed PMID:
12039767; PubMed Central PMCID: PMC123911.
 
 
20: Bellaoui M, Pidkowich MS, Samach A, Kushalappa K, Kohalmi SE, Modrusan Z,
Crosby WL, Haughn GW. The Arabidopsis BELL1 and KNOX TALE homeodomain proteins
interact through a domain conserved between plants and animals. Plant Cell. 2001
Nov;13(11):2455-70. PubMed PMID: 11701881; PubMed Central PMCID: PMC139464.

Latest revision as of 20:17, 13 September 2016

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Search Pubmedor Google Scholar for more publications from the Crosby lab


1: Dezfulian MH, Jalili E, Roberto DK, Moss BL, Khoo K, Nemhauser JL, Crosby WL. Oligomerization of SCFTIR1 Is Essential for Aux/IAA Degradation and Auxin Signaling in Arabidopsis. PLoS Genet. 2016 Sep 12;12(9):e1006301. doi: 10.1371/journal.pgen.1006301. eCollection 2016 Sep. PubMed PMID: 27618443.


2: Pandurangan S, Diapari M, Yin F, Munholland S, Perry GE, Chapman BP, Huang S, Sparvoli F, Bollini R, Crosby WL, Pauls KP, Marsolais F. Genomic Analysis of Storage Protein Deficiency in Genetically Related Lines of Common Bean (Phaseolus vulgaris). Front Plant Sci. 2016 Mar 31;7:389. doi: 10.3389/fpls.2016.00389. eCollection 2016. PubMed PMID: 27066039; PubMed Central PMCID: PMC4814446.


3: Risseeuw E, Venglat P, Xiang D, Komendant K, Daskalchuk T, Babic V, Crosby W, Datla R. An activated form of UFO alters leaf development and produces ectopic floral and inflorescence meristems. PLoS One. 2013 Dec 23;8(12):e83807. doi: 10.1371/journal.pone.0083807. eCollection 2013. PubMed PMID: 24376756; PubMed Central PMCID: PMC3871548.


4: Perry G, Dinatale C, Xie W, Navabi A, Reinprecht Y, Crosby W, Yu K, Shi C, Pauls KP. A comparison of the molecular organization of genomic regions associated with resistance to common bacterial blight in two Phaseolus vulgaris genotypes. Front Plant Sci. 2013 Aug 29;4:318. doi: 10.3389/fpls.2013.00318. eCollection 2013. PubMed PMID: 24009615; PubMed Central PMCID: PMC3756299.


5: Dezfulian MH, Soulliere DM, Dhaliwal RK, Sareen M, Crosby WL. The SKP1-like gene family of Arabidopsis exhibits a high degree of differential gene expression and gene product interaction during development. PLoS One. 2012;7(11):e50984. doi: 10.1371/journal.pone.0050984. Epub 2012 Nov 30. PubMed PMID: 23226441; PubMed Central PMCID: PMC3511428.


6: Liu SY, Yu K, Huffner M, Park SJ, Banik M, Pauls KP, Crosby W. Construction of a BAC library and a physical map of a major QTL for CBB resistance of common bean (Phaseolus vulgaris L.). Genetica. 2010 Jul;138(7):709-16. doi: 10.1007/s10709-010-9450-3. Epub 2010 Apr 25. PubMed PMID: 20419470.


7: Toronto International Data Release Workshop Authors, Birney E, Hudson TJ, Green ED, Gunter C, Eddy S, Rogers J, Harris JR, Ehrlich SD, Apweiler R, Austin CP, Berglund L, Bobrow M, Bountra C, Brookes AJ, Cambon-Thomsen A, Carter NP, Chisholm RL, Contreras JL, Cooke RM, Crosby WL, Dewar K, Durbin R, Dyke SO, Ecker JR, El Emam K, Feuk L, Gabriel SB, Gallacher J, Gelbart WM, Granell A, Guarner F, Hubbard T, Jackson SA, Jennings JL, Joly Y, Jones SM, Kaye J, Kennedy KL, Knoppers BM, Kyrpides NC, Lowrance WW, Luo J, MacKay JJ, Martín-Rivera L, McCombie WR, McPherson JD, Miller L, Miller W, Moerman D, Mooser V, Morton CC, Ostell JM, Ouellette BF, Parkhill J, Raina PS, Rawlings C, Scherer SE, Scherer SW, Schofield PN, Sensen CW, Stodden VC, Sussman MR, Tanaka T, Thornton J, Tsunoda T, Valle D, Vuorio EI, Walker NM, Wallace S, Weinstock G, Whitman WB, Worley KC, Wu C, Wu J, Yu J. Prepublication data sharing. Nature. 2009 Sep 10;461(7261):168-70. doi: 10.1038/461168a. PubMed PMID: 19741685; PubMed Central PMCID: PMC3073843.


8: Houde M, Belcaid M, Ouellet F, Danyluk J, Monroy AF, Dryanova A, Gulick P, Bergeron A, Laroche A, Links MG, MacCarthy L, Crosby WL, Sarhan F. Wheat EST resources for functional genomics of abiotic stress. BMC Genomics. 2006 Jun 13;7:149. PubMed PMID: 16772040; PubMed Central PMCID: PMC1539019.


9: Hill JE, Goh SH, Money DM, Doyle M, Li A, Crosby WL, Links M, Leung A, Chan D, Hemmingsen SM. Characterization of vaginal microflora of healthy, nonpregnant women by chaperonin-60 sequence-based methods. Am J Obstet Gynecol. 2005 Sep;193(3 Pt 1):682-92. PubMed PMID: 16150261.


10: Alting-Mees MA, Risseeuw EP, Liu E, Desautels M, Crosby WA, Hemmingsen SM. Intracellular expression of recombinant antibody fluorescent protein fusions for localization of target antigens in Schizosaccharomyces pombe. Methods Mol Biol. 2006;313:97-105. PubMed PMID: 16118428.


11: Han L, Mason M, Risseeuw EP, Crosby WL, Somers DE. Formation of an SCF(ZTL) complex is required for proper regulation of circadian timing. Plant J. 2004 Oct;40(2):291-301. PubMed PMID: 15447654.


12: Zhao D, Han T, Risseeuw E, Crosby WL, Ma H. Conservation and divergence of ASK1 and ASK2 gene functions during male meiosis in Arabidopsis thaliana. Plant Mol Biol. 2003 Sep;53(1-2):163-73. PubMed PMID: 14756314.


13: Alonso JM, Stepanova AN, Leisse TJ, Kim CJ, Chen H, Shinn P, Stevenson DK, Zimmerman J, Barajas P, Cheuk R, Gadrinab C, Heller C, Jeske A, Koesema E, Meyers CC, Parker H, Prednis L, Ansari Y, Choy N, Deen H, Geralt M, Hazari N, Hom E, Karnes M, Mulholland C, Ndubaku R, Schmidt I, Guzman P, Aguilar-Henonin L, Schmid M, Weigel D, Carter DE, Marchand T, Risseeuw E, Brogden D, Zeko A, Crosby WL, Berry CC, Ecker JR. Genome-wide insertional mutagenesis of Arabidopsis thaliana. Science. 2003 Aug 1;301(5633):653-7. Erratum in: Science. 2003 Sep;301(5641):1849. PubMed PMID: 12893945.


14: Risseeuw EP, Daskalchuk TE, Banks TW, Liu E, Cotelesage J, Hellmann H, Estelle M, Somers DE, Crosby WL. Protein interaction analysis of SCF ubiquitin E3 ligase subunits from Arabidopsis. Plant J. 2003 Jun;34(6):753-67. PubMed PMID: 12795696.


15: Wang X, Feng S, Nakayama N, Crosby WL, Irish V, Deng XW, Wei N. The COP9 signalosome interacts with SCF UFO and participates in Arabidopsis flower development. Plant Cell. 2003 May;15(5):1071-82. PubMed PMID: 12724534; PubMed Central PMCID: PMC153717.


16: Diaz-Camino C, Risseeuw EP, Liu E, Crosby WL. A high-throughput system for two-hybrid screening based on growth curve analysis in microtiter plates. Anal Biochem. 2003 May 15;316(2):171-4. PubMed PMID: 12711337.


17: Wilkinson MD, Block D, Crosby WL. Genquire: genome annotation browser/editor. Bioinformatics. 2002 Oct;18(10):1398-9. PubMed PMID: 12376386.


18: Xu L, Liu F, Lechner E, Genschik P, Crosby WL, Ma H, Peng W, Huang D, Xie D. The SCF(COI1) ubiquitin-ligase complexes are required for jasmonate response in Arabidopsis. Plant Cell. 2002 Aug;14(8):1919-35. PubMed PMID: 12172031; PubMed Central PMCID: PMC151474.


19: Hill JE, Seipp RP, Betts M, Hawkins L, Van Kessel AG, Crosby WL, Hemmingsen SM. Extensive profiling of a complex microbial community by high-throughput sequencing. Appl Environ Microbiol. 2002 Jun;68(6):3055-66. PubMed PMID: 12039767; PubMed Central PMCID: PMC123911.


20: Bellaoui M, Pidkowich MS, Samach A, Kushalappa K, Kohalmi SE, Modrusan Z, Crosby WL, Haughn GW. The Arabidopsis BELL1 and KNOX TALE homeodomain proteins interact through a domain conserved between plants and animals. Plant Cell. 2001 Nov;13(11):2455-70. PubMed PMID: 11701881; PubMed Central PMCID: PMC139464.

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