Cumbers:Software: Difference between revisions
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Here are some R scripts that I wrote for processing growth curve data from 96 well plates using XML files from a Molecular Devices Plate Reader. | Here are some R scripts that I wrote for processing growth curve data from 96 well plates using XML files from a Molecular Devices Plate Reader. There are 7 functions in 3 different files and the diagram below outlines what each function does. | ||
[[Image:Screen_shot_2011-08-09_at_3.42.00_PM.png|650px]] | [[Image:Screen_shot_2011-08-09_at_3.42.00_PM.png|650px]] | ||
You can download the files here and run them in R: | |||
1.http://openwetware.org/images/e/e6/Script_to_produce_growth_data_from_single_wells_with_stats_for_a_single_plate_9.0.1.R | 1.http://openwetware.org/images/e/e6/Script_to_produce_growth_data_from_single_wells_with_stats_for_a_single_plate_9.0.1.R | ||
2.http://openwetware.org/wiki/Image:Function_takes_plate%2C_well%2C_returns_growth_stats.3.1.0.R | 2.http://openwetware.org/wiki/Image:Function_takes_plate%2C_well%2C_returns_growth_stats.3.1.0.R | ||
3.http://openwetware.org/images/0/0f/List_wells_from_well_phrase_and_validate_functions.2.2.1.R | 3.http://openwetware.org/images/0/0f/List_wells_from_well_phrase_and_validate_functions.2.2.1.R | ||
Revision as of 15:45, 9 August 2011
Here are some R scripts that I wrote for processing growth curve data from 96 well plates using XML files from a Molecular Devices Plate Reader. There are 7 functions in 3 different files and the diagram below outlines what each function does.
You can download the files here and run them in R: 1.http://openwetware.org/images/e/e6/Script_to_produce_growth_data_from_single_wells_with_stats_for_a_single_plate_9.0.1.R 2.http://openwetware.org/wiki/Image:Function_takes_plate%2C_well%2C_returns_growth_stats.3.1.0.R 3.http://openwetware.org/images/0/0f/List_wells_from_well_phrase_and_validate_functions.2.2.1.R
