Dahlquist:Yeast Transcription Factors

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Dahlquist Lab Yeast Transcription Factor Resources

This page displays a compiled list of yeast transcription factor resources. Included are data on transcription factor target genes and transcription factor regulatory networks in yeast, links to web servers providing easy-to-use TF searches and other potentially helpful resources.

Web Servers

• MYBS Mining Yeast Binding Sites

The search regulatory associations function allows the user to input a list of genes of interest and search for candidate transcription factors that regulate the list of genes. Allows filtering according to multiple criteria.

• From Tsai, HK et al. MYBS: A comprehensive web server for mining transcription factor binding sites in yeast. Nucleic Acids Research 2007. PubMed

• TFSVM Transcription Factor Support Vector Machine

Allows user to input either a single transcription factor to get a list of regulated target genes or a single gene to get a list of transcription factors that regulate that gene. Can also filter according to p-value.

• From Holloway, DT et al. Classifying transcription factor targets and discovering relevant biological features. Biology Direct 2008. 3:22. PubMed