Data Files: Difference between revisions
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== Taxonomy Assignments == | == Taxonomy Assignments == | ||
*there are three files here, each corresponds to one of the three chimera-checked sequence files above (i.e., putative, sub-threshold, and clean) | *there are three files here, each corresponds to one of the three chimera-checked sequence files above (i.e., putative, sub-threshold, and clean) | ||
# clean sequences [[Image:Classifications All NAST.Bclean.fasta30593.xls]] | |||
# sub-threshold chimeric sequences [[Image:Classifications All NAST.Bambig.fasta27959.xls]] | |||
# putative chimeric sequences [[Image:Classifications All NAST.Bchimera.fasta28223.xls]] | |||
== Alignment == | == Alignment == |
Revision as of 11:37, 20 April 2009
Sequence files
- Chimera-checking results
- these include one summary file (excel spreadsheet) and three sequence files (fasta-formatted NAST alignments) with 6321 clean sequences, 44 sub-threshhold chimeric sequences, and 291 putative chimeric sequences
File:All NAST Bel job17274.tgz
Taxonomy Assignments
- there are three files here, each corresponds to one of the three chimera-checked sequence files above (i.e., putative, sub-threshold, and clean)
- clean sequences File:Classifications All NAST.Bclean.fasta30593.xls
- sub-threshold chimeric sequences File:Classifications All NAST.Bambig.fasta27959.xls
- putative chimeric sequences File:Classifications All NAST.Bchimera.fasta28223.xls
Alignment
- below is the most current version of the NAST-formatted alignment file.