Eisen:Publications

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#WATERS-2010 pmid=20540779
#WATERS-2010 pmid=20540779
#Metasim-2010 pmid=20419134  
#Metasim-2010 pmid=20419134  

Revision as of 17:06, 15 July 2011


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Evolution Textbook

Journals and Book Chapters

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  1. Error fetching PMID 20540779: [WATERS-2010]
  2. Error fetching PMID 20419134: [Metasim-2010]
  3. Error fetching PMID 20418944: [Biotorrents-2010]
  4. Error fetching PMID 20333302: [Haloferax-2010]
  5. Error fetching PMID 20033048: [GEBA-2009]
  6. Error fetching PMID 19855830: [PLOS-2009]
  7. Error fetching PMID 19805153: [Hartman-2009]
  8. Error fetching PMID 19568419: [Wang-2009]
  9. Error fetching PMID 19390573: [Woyke-2009]
  10. Error fetching PMID 19197347: [Campbell-2009]
  11. Error fetching PMID 19148287: [Wu-2009]
  12. Error fetching PMID 19077236: [Valdes-2008]
  13. Error fetching PMID 19036158: [Coyne-2008]
  14. Error fetching PMID 19000309: [Podar-2008]
  15. Error fetching PMID 18851752: [WuEisen-2008]
  16. Error fetching PMID 18596968: [Wu-2008]
  17. Chatterji S, Yamazaki I, Bai Z, Eisen JA. 2008. CompostBin: a DNA composition-based algorithm for binning environmental shotgun reads. RECOMB 2008. [Chatterji-2008]
  18. Error fetching PMID 18303952: [Eisen-2008]
    My first editorial as the new Academic Editor in Chief of PLoS Biology

  19. Error fetching PMID 17921277: [Hazen-2007]
    A paper on sequencing and analysis of plasmids isolated from marine sediments. This was a collaboration with Patty Sobecky's lab at Georgia Tech.

  20. Error fetching PMID 17684235: [Pfarr-2007]
    A letter discussing the nomenclature for strains of Wolbachia.

  21. Error fetching PMID 17606904: [Maresca-2007]
    A paper in which we used phylogenetic profiling to help identify a new type of gene involved in photosynthesis. This was a collaboration with Don Bryant's lab at Penn St.

  22. Error fetching PMID 17511521: [Norais-2007]
    A collaboration with Thorsten Allers' lab on identifying replication origins.

  23. Error fetching PMID 17355177: [Eisen-2007]
    A review I wrote on methods for characterizing uncultured microbes, focusing on the lead in to metagenomics.

  24. Error fetching PMID 17355176: [Rusch-2007]
    One of the papers from Craig Venter's group on the "Global Ocean Survey." This one focused on microbial diversity.

  25. Error fetching PMID 17355171: [Yooseph-2007]
    Another of the papers from Craig Venter's group on the "Global Ocean Survey." This one focused on protein families.

  26. Error fetching PMID 17303757: [Newton-2007]
    A collaboration with Colleen Cavanaugh's lab (she was my undergraduate advisor) and JGI on sequencing and analysis of the first genome of a chemosynthetic symbiont.

  27. Error fetching PMID 17015832: [Goldman-2006]
  28. Error fetching PMID 16933976: [Eisen-2006]
  29. Error fetching PMID 16901231: [Leebens-Mack-2006]
  30. Error fetching PMID 16782302: [Hamilton-2006]
  31. Error fetching PMID 16482227: [Dunning-2006]
  32. Error fetching PMID 16729848: [Wu-2006]
  33. Error fetching PMID 16461727: [Penn-2006]
  34. Error fetching PMID 16311624: [Wu-2005]
  35. Robb FT, Gonzalez JM, Sokolova T, Chernyh N, Lebedinski A, Tallon LJ, Jones K, Wu M, Eisen JA. 2005. Primary energy metabolism in geothermal environments: the role of carbon monoxide. In “Geothermal biology and geochemistry in Yellowstone National Park. ” Inskeep WP and McDermott TR, pp. 163-170. Montana State University Thermal Biology Institute. [Robb-2005]
  36. Error fetching PMID 15883371: [Schmidt-2005]
  37. Error fetching PMID 15879228: [Badger-2005]
  38. Error fetching PMID 15774035: [Desjardins-2005]
  39. Error fetching PMID 15637277: [Seshadri-2005]
  40. Error fetching PMID 15602564: [Moran-2004]
  41. Error fetching PMID 15454524: [Tanaka-2004]
  42. Error fetching PMID 15383840: [Ward-2004]
  43. Error fetching PMID 15001713: [Venter-2004]
  44. Error fetching PMID 15024419: [Wu-2004]
  45. Error fetching PMID 15003838: [Ghedin-2004]
  46. Error fetching PMID 15064399: [Seshadri-2004]
  47. Error fetching PMID 15077118: [Heidelberg-2004]
  48. Error fetching PMID 14671304: [Methe-2003]
  49. Error fetching PMID 12949112: [Nelson-2003]
  50. Error fetching PMID 12923095: [Miller-2003]
  51. Error fetching PMID 14550293: [Yang-2003]
  52. Error fetching PMID 12754238: [Alland-2003]
  53. Error fetching PMID 12704232: [Seshadri-2003]
  54. Error fetching PMID 12805538: [Eisen-and_Fraser-2003]
  55. Error fetching PMID 12663927: [Paulsen-2003]
  56. Error fetching PMID 12777046: [Ermolaeva-2003]
  57. Shank T, Fornari D, Yoerger S, Humphries S, Bradley A, Hammond S, Lupton J, Schierer D, Collier R, Reysenbach A-L, Ding K, Seyfried W, Butterfield D, Olson E, Lilley M, Ward N, Eisen JA. 2003. Deep submergence synergy: Alvin and ABE explore the Galápagos Rift at 86°W. EOS 84: 425, 432-433. [Shank-2003]
  58. DiRuggiero J, Nandakumar R, Eisen JA, Schwartz M, Thomas R, Davila J, Ofman L, Robb FT. 2002. Genomic and physiological studies on extremophiles: model systems for exobiology. In “Frontiers of Astrobiology. Proceedings of the Astrobiology Workshop”, St Petersburg, Russia. Pavlov A. (Ed. ). [DiRuggiero-2002]
  59. Error fetching PMID 12721629: [Read-2002]
  60. Error fetching PMID 12534463: [Nelson-2002]
  61. Error fetching PMID 11859347: [Eisen-2002]
  62. Error fetching PMID 12093901: [Eisen-2002]
  63. Error fetching PMID 12167367: [Eisen-2002]
  64. Error fetching PMID 12368813: [Heidelberg-2002]
  65. Error fetching PMID 11880612: [VanHouten-2002]
  66. Error fetching PMID 12368864: [Gardner-2002]
  67. Error fetching PMID 12271122: [Paulsen-2002]
  68. Error fetching PMID 12426324: [Fraser-2002]
  69. Error fetching PMID 12218036: [Fleischmann-2002]
  70. Error fetching PMID 12200547: [Tettelin-2002]
  71. Error fetching PMID 11832943: [Beja-2002]
  72. Error fetching PMID 16228359: [Dassarma-2002]
  73. Error fetching PMID 11812492: [Ware-2001]
  74. Error fetching PMID 11743193: [Wood-2001]
  75. Error fetching PMID 11206526: [Eisen-2001]
  76. Eisen JA. 2001. Response to Mackiewicz et al. Genome Biology, 2 (12): interactions1004. 1-1004. [Eisen-2001]
  77. Error fetching PMID 11463916: [Tettelin-2001]
  78. Error fetching PMID 11700527: [Ward-2001]
  79. Error fetching PMID 11259647: [Nierman-2001]
  80. Error fetching PMID 11503638: [Salzberg-2001b]
  81. Error fetching PMID 11358996: [Salzberg-2001a]
  82. Error fetching PMID 11228431: [Bevan-2001]
  83. Error fetching PMID 11210497: [Nelson-2001]
  84. Error fetching PMID 11125044: [Haft-2000]
  85. Eisen JA. 2000. Microbial and plant genomics. Journal of Biolaw and Business, Special Supplement. 21-24. [Eisen-2000]
  86. Error fetching PMID 10684935: [Read-2000]
  87. Error fetching PMID 11130711: [AGI-2000]
  88. Error fetching PMID 10851186: [Nierman-2000b]
  89. Error fetching PMID 10710307: [Tettelin-2000]
  90. Error fetching PMID 10857751: [Coleman-2000]
  91. Error fetching PMID 10952301: [Heidelberg-2000]
  92. Error fetching PMID 11178265: [Eisen-etal-2000]
  93. Error fetching PMID 11110893: [Pollock-2000]
  94. Error fetching PMID 11088009: [Eisen-2000b]
  95. Error fetching PMID 11050445: [Eisen-2000a]
  96. Error fetching PMID 10998382: [Fraaser-2000b]
  97. Error fetching PMID 10963611: [Fraser-2000a]
  98. Error fetching PMID 10865951: [Nierman-2000]
  99. Error fetching PMID 10617197: [Lin-1999]
  100. Error fetching PMID 10606811: [Eisen-and-Hanawalt-1999]
  101. Error fetching PMID 10419407: [Eisen-1999b]
  102. "Mechanistic basis for microsatelite instability in David B. Goldstein and Christian Schlötterer. Microsatellites. Oxford; Oxford University Press, 1999" isbn=0198504071 [Eisen-1999a-]
  103. Error fetching PMID 10567266: [White-1999]
  104. Error fetching PMID 10360571: [Nelson-1999]
  105. Error fetching PMID 9799093: [Wei-1998]
  106. Error fetching PMID 9521918: [Eisen-1998]
  107. Error fetching PMID 9722651: [Eisen-1998]
  108. Error fetching PMID 9595663: [Gruber-1998]
  109. Error fetching PMID 9419371: [White-1998]
  110. Error fetching PMID 9334711: [Eisen-etal-1997]
  111. Error fetching PMID 9089600: [Eisen-1997]
  112. Error fetching PMID 9188616: [Shafer-1997]
  113. Error fetching PMID 8587109: [Eisen-1995]
  114. Error fetching PMID 7651832: [Eisen-etal-1995]
  115. Error fetching PMID 8041625: [Eisen-1994]
  116. Error fetching PMID 8407828: [Liu-1993]
  117. Error fetching PMID 1577710: [Eisen-1992]
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