Ellis: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
(167 intermediate revisions by 2 users not shown)
Line 1: Line 1:
{{Ellis Top}}
{{Ellis Top}}


<font face="trebuchet ms" style="color:#000000">The Ellis Lab is actively involved in advancing foundational synthetic biology and applying synthetic biology to a variety of different research areas. Our research is interdisciplinary, with members coming from biology, chemistry, maths and engineering backgrounds. The laboratory is part of [http://www3.imperial.ac.uk/syntheticbiology CSynBI, The Centre for Synthetic Biology and Innovation] and [http://www3.imperial.ac.uk/bioengineering The Department of Bioengineering] at [http://www3.imperial.ac.uk/ Imperial College, London]. A major focus of the lab is studying the construction of regulatory networks and improving methods to assemble complex genetic devices in cells.
<font face="trebuchet ms" style="color:#000000">The Ellis Lab is actively involved in advancing foundational synthetic biology and applying synthetic biology to a variety of different research areas. Our research is interdisciplinary, with members coming from biology, chemistry, maths and engineering backgrounds. The laboratory is part of the [http://www.synbiuk.org UK Flowers Consortium] for synthetic biology infrastructure and is based in [http://www3.imperial.ac.uk/syntheticbiology CSynBI, The Centre for Synthetic Biology and Innovation] and [http://www3.imperial.ac.uk/bioengineering The Department of Bioengineering] at [http://www3.imperial.ac.uk/ Imperial College, London]. The major focuses of the lab are studying the construction of regulatory networks and understanding how to build a designer genome from parts.


'''Follow Tom Ellis on Twitter at [http://twitter.com/#!/drtomellis @drtomellis]'''
'''Follow Tom Ellis on Twitter at [http://twitter.com/#!/drtomellis @drtomellis]'''
<br>


== Latest News ==
 
* Mar 2011: Talks of our research are being used in an interactive artwork: [http://lablife.posterous.com/#!/the-aesthetics-of-perplexity Public Misunderstandings of Science] currently at Lab Life at The Lighthouse, Brighton.
 
[[Image:SynBioAssembly.jpg|right|DNA Assembly for Synthetic Biology]]
== Monthly News ==
* Feb 2011: [http://vimeo.com/19759432 E.Chromi project] with James King and Alexandra Daisy Ginsberg, nominated for UK Design Museum's 2010 [http://designmuseum.org/exhibitions/2011/brit-insurance-designs-of-the-year Design Of The Year].
* Aug 2015: Tom will be attending the [http://yeastcell.eu/training/ YEASTCELL] Summer School in Frankfurt this month.
* Jan 2011: Critical Review of DNA ASSEMBLY methods published online at [http://pubs.rsc.org/en/Content/ArticleLanding/2011/IB/C0IB00070A Integrative Biology]. PDF is available [http://openwetware.org/images/2/2e/EllisAssembly.pdf here.]
* Jul 2015: Dejana, Tom and Rob are presenting progress at the [http://events.bizzabo.com/SynGenome2015/home 2015 Synthetic Genomes Conference] in New York.
* Dec 2010: Speaking at the [http://www.genopole.fr/Home,4153.html International Conference on Synthetic Biology] at Genopole, Evry, France - Dec 15th and 16th.
* Jun 2015: Our paper on DNA Assembly Methods and Standards is out in [http://www.nature.com/nrm/journal/vaop/ncurrent/full/nrm4014.html Nature Reviews Molecular Cell Biology]
* Nov 2010: Talking at Imperial College's [http://www3.imperial.ac.uk/syntheticbiology/about/autumnsymposium Autumn Symposium on Systems and Synthetic Biology] on 11th November and at [http://www.sckcen.be/en/Events/TD_BIOINFO TD Bioinformatics] at SCK.CEN in Mol, Belgium on 19th November
* May 2015: Check out the recap of our recent [http://synbio.plos.org/2015/04/30/tom-ellis-chat-recap/ PLoS SynBio webchat]
* Oct 2010: Welcoming Ben Blount and PhD candidates Rhys Algar, Arturo Casini and Elena Martinez-Klimova to the group
* Apr 2015: Francesca & Rhys' paper on measuring burden and optimising constructs design is online at [http://www.nature.com/nmeth/journal/vaop/ncurrent/full/nmeth.3339.html Nature Methods]
* Sep 2010: Attending [http://www.lse.ac.uk/collections/BIOS/events/forthcoming_events.htm Synthetic Biology and Open Source: Normative Cultures of Biology] at BIOS @ LSE, London
[[Image:CoverArt_Burden.GIF|320px|right|Ceroni et al. Nature Methods]]
* Aug 2010: Helping [http://2010.igem.org/Team:Imperial_College_London Imperial's 2010 iGEM team - Parasight]
* Mar 2015: Our work on engineered yeast was presented to BBSRC CEO Jackie Hunter & UK Chief Scientist Mark Wolpert and will be presented at [http://www.byg2015.ls.manchester.ac.uk/ BYG2015 on March 26]
* Jul 2010: Writing a review on gene-to-genome DNA assembly methods
* Feb 2015: Both Arturo and Elena passed their PhD vivas. Well done guys!
* Jun 2010: Attended the [http://cctbio.ece.umn.edu/wiki/index.php/IWBDA:International_Workshop_on_Bio_Design_Automation 2nd International Workshop on Bio-Design Automation] at DAC in Anaheim, California
* Jan 2015: Francesca presents on 26th at [http://www.lorentzcenter.nl/lc/web/2015/686/info.php3?wsid=686&venue=Oort Lorentz Centre workshop on Integrative Cell Models]
* May 2010: Talking at [http://www.nhm.ac.uk/visit-us/whats-on/events/programs/naturelive/man-made_nature.html Nature Live!] on Thurs 27th 7pm at the Natural History Museum, London
* Dec 2014: Ben Reeve is presenting Aqualose at [http://www.biofabricate.co/ Biofabricate] in New York
* Apr 2010: Now Hiring A Postdoc Researcher - [[Ellis:Open Positions|OPEN POSITIONS]]
* Nov 2014: Our awesome [http://2014.igem.org/Team:Imperial iGEM team Aqualose] is 2nd best in the world. '''Congratulations!'''
* Mar 2010: Moving into CSynBI Lab Space on 6th Floor of The Bessemer Building
* Oct 2014: Welcoming 3 lab new members: Charlie Gilbert, Will Shaw and Robert Chen.
* Feb 2010: Setting-up the Ellis Lab online
* Sep 2014: Ben Reeve's book chapter on [http://link.springer.com/chapter/10.1007/978-3-662-43619-6_1 Synthetic Biology & Bioluminescence] is out
* Jan 2010: [[user:Ellis|Tom Ellis]] joins Imperial College, London's new Centre for Synthetic Biology and Innovation
* Aug 2014: Dejana's paper on the Sc2.0 synthetic yeast project is in [http://onlinelibrary.wiley.com/doi/10.1002/bies.201400086/abstract Bioessays]
* Jul 2014: Francesca and Tom are both speakers at the [http://www.synbioconference.org/ SEED2014 Conference] in L.A. on 15th July.
* Jun 2014: Ollie's GeneGuard Plasmid System paper is published in [http://pubs.acs.org/doi/abs/10.1021/sb500234s ACS Synthetic Biology].
* May 2014: Tom has been awarded a prestigious [http://www.epsrc.ac.uk/newsevents/news/engineeringfellowship/ EPSRC Engineering Fellowship] from 2015 to 2020.
* Apr 2014: The [http://pubs.acs.org/toc/asbcd6/3/3 SB6.0 Issue of ACS Synthetic Biology] is now out, edited by Tom and Yizhi Cai.
* Mar 2014: Arturo's paper on R2o DNA Designer Software is out in [http://pubs.acs.org/doi/abs/10.1021/sb4001323 ACS Synthetic Biology]
* Feb 2014: Read about how our Sc2.0 project is a landmark in [http://www.bbsrc.ac.uk/news/research-technologies/2014/140130-f-genomics-a-new-dawn.aspx UK genomics research].
* Jan 2014: Arturo and Tom will both be speaking at the [http://www.sebiology.org/meetings/synthetic_biology/overview.htmlSEB Symposium on Synthetic Biology] on Jan 10th.
* Dec 2013: Tom Ellis will be the guest speaker at the Henrietta Barnett School on Dec 17th.
* Nov 2013: Tom, Francesca and Ollie will all be attending [http://www2.warwick.ac.uk/fac/sci/lifesci/news/synbioworkshop Towards Next Generation Synthetic Biology] in Warwick
* Oct 2013: Arturo's paper on modular overlap DNA assembly is published in [http://nar.oxfordjournals.org/content/early/2013/10/22/nar.gkt915.full Nucleic Acids Research]
* Sep 2013: Rhys's model that captures translation burden is now up on [http://arxiv.org/abs/1309.7798 ArXiv QBio]
* Aug 2013: Our paper on Spinach RNA aptamer for characterising gene expression is now out in [http://pubs.acs.org/doi/abs/10.1021/sb400089c ACS Synthetic Biology]
* Jul 2013: We are looking forward to '''welcoming the synthetic biology world''' to Imperial for the [http://sb6.biobricks.org/ SB6.0 Conference] and the [http://syntheticyeast.eventbrite.com/ 2nd annual synthetic yeast genome meeting].
* Jun 2013: Our [http://www.pnas.org/content/early/2013/06/07/1305423110 PNAS paper] from our collaboration with Xiao Wang's lab at ASU is published
* May 2013: Tom Ellis will be speaking at the [http://www.garnetcommunity.org.uk/news/13-01-18/plant-synthetic-biology-workshop GARNET Synthetic Biology workshop] on May 22nd. 
* Apr 2013: Ollie's review on [http://mic.sgmjournals.org/content/early/2013/03/20/mic.0.066308-0.abstract Building-in Biosafety for Synthetic Biology] is published online in Microbiology.
* Mar 2013: Ben Blount and Tom Ellis will be speaking at the [http://www.britishyeastgroup.org British Yeast Group Meeting], Nottingham, Mar 20th.
* Feb 2013: Welcoming Joshua Smit, Joachim de Jonge and Thomas Hargest to the Ellis Lab
* Jan 2013: Welcoming Dr Francesca Ceroni to our group.
 
'''For older news please see [[Ellis:Archive]]'''
<br>
<br>


== Latest bookmarked papers ==
== What we're reading... ==
<xfeeds contentcolour="#eeeeee" feedlimit="5" totallimit="10">
<xfeeds contentcolour="#eeeeee" feedlimit="5" totallimit="10">
http://www.citeulike.org/rss/user/tellis
http://www.citeulike.org/rss/user/tellis
Line 35: Line 55:
</a>
</a>
</html>
</html>
Banner illustration by [http://www.rappart.com/portfolio/0/120/8113/harry_campbell Harry Campbell]

Revision as of 01:03, 8 August 2015


The Ellis Lab is actively involved in advancing foundational synthetic biology and applying synthetic biology to a variety of different research areas. Our research is interdisciplinary, with members coming from biology, chemistry, maths and engineering backgrounds. The laboratory is part of the UK Flowers Consortium for synthetic biology infrastructure and is based in CSynBI, The Centre for Synthetic Biology and Innovation and The Department of Bioengineering at Imperial College, London. The major focuses of the lab are studying the construction of regulatory networks and understanding how to build a designer genome from parts.

Follow Tom Ellis on Twitter at @drtomellis


Monthly News

Ceroni et al. Nature Methods
Ceroni et al. Nature Methods

For older news please see Ellis:Archive

What we're reading...

<xfeeds contentcolour="#eeeeee" feedlimit="5" totallimit="10"> http://www.citeulike.org/rss/user/tellis </xfeeds>


<html> <a href="http://www2.clustrmaps.com/user/cf9be91d"><img src="http://www2.clustrmaps.com/stats/maps-no_clusters/openwetware.org-wiki-Ellis-thumb.jpg" alt="Locations of visitors to this page" /> </a> </html>

Banner illustration by Harry Campbell